BLASTX 7.6.2
Query= UN56002 /QuerySize=790
(789 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8LDS3|RTNLR_ARATH Reticulon-like protein B18 OS=Arabidopsis ... 198 5e-050
sp|Q6DR04|RTNLQ_ARATH Reticulon-like protein B17 OS=Arabidopsis ... 139 3e-032
sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis ... 62 4e-009
>sp|Q8LDS3|RTNLR_ARATH Reticulon-like protein B18 OS=Arabidopsis thaliana
GN=RTNLB18 PE=2 SV=2
Length = 457
Score = 198 bits (502), Expect = 5e-050
Identities = 109/154 (70%), Positives = 124/154 (80%), Gaps = 6/154 (3%)
Frame = +1
Query: 31 ARWCKTKGGQNGLFSSALPRNFRRS---SEVVV-VVEEPKPVVVLTDEKGTKPRKHKKMV 198
AR KTKGGQNGL +S PRNFRRS SE +V E +P+VV+TDEK RK KK+
Sbjct: 98 ARRSKTKGGQNGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLG 157
Query: 199 RSKKEKQSSVPLLPSPPCLSSDLSEDVCQGDLERIRENINDLIMWRDVAKSTLRFGFGCL 378
RSKKEK SSVPLL S P SSD +DVCQGDLERIRENI+DLIMWRDVAKSTL FGFGC+
Sbjct: 158 RSKKEKHSSVPLLAS-PSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCI 216
Query: 379 YFMSSCF-AKGFSFSVFSAVSHVGLLFLGVSFLS 477
F+S+CF AKGF+FSVFSA+S++GLLFLGVSFLS
Sbjct: 217 CFLSTCFAAKGFNFSVFSAISYLGLLFLGVSFLS 250
Score = 58 bits (139), Expect = 6e-008
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Frame = +2
Query: 419 VFSQRSLMLGFCFSGFRF-CHSLRQRVTEETERR*VKLSEEDVLRVARRMLPVTNFGD-- 589
VFS S LG F G F ++LRQRVTEE RR +KLSE+DVLR+ARRMLP+TN
Sbjct: 232 VFSAIS-YLGLLFLGVSFLSNTLRQRVTEEA-RRELKLSEDDVLRIARRMLPITNLAISK 289
Query: 590 ----FRDEPAFLWRTSNDTQSGTALHHVFTVLHSASCLYSSAFCIMSSQFCIMS 739
F EPA + + G ++ T+ + + +F I C S
Sbjct: 290 TSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYAS 343
>sp|Q6DR04|RTNLQ_ARATH Reticulon-like protein B17 OS=Arabidopsis thaliana
GN=RTNLB17 PE=2 SV=1
Length = 431
Score = 139 bits (349), Expect = 3e-032
Identities = 83/145 (57%), Positives = 97/145 (66%), Gaps = 7/145 (4%)
Frame = +1
Query: 43 KTKGGQNGLFSSALPRNFRRSSEVVVVVEEPKPVVVLTDEKGTKPRKHKKMVRSKKEKQS 222
K KGGQ L +S PRN RRS VEE + +V+ + PRK K R KK+KQS
Sbjct: 85 KGKGGQKSLLAS--PRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKDKQS 142
Query: 223 SVPLLPSPPCLSSDLSEDVCQGDLERIRENINDLIMWRDVAKSTLRFGFGCLYFMSSCFA 402
S P P C SSDL + CQ DL I E I+DL+MWRDVAKSTL FGFGCL F+SSCFA
Sbjct: 143 SAP----PLCSSSDL-PNTCQSDLNLIGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFA 197
Query: 403 KGFSFSVFSAVSHVGLLFLGVSFLS 477
KG +FSVFSAVS++GL+ L SFLS
Sbjct: 198 KGVNFSVFSAVSNLGLVLLCGSFLS 222
>sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis thaliana
GN=RTNLB21 PE=2 SV=1
Length = 487
Score = 62 bits (149), Expect = 4e-009
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = +1
Query: 307 ENINDLIMWRDVAKSTLRFGFGCLYFMSSCFAKGFSFSVFSAVSHVGLLFLGVSFL 474
+++ DL+MWRDV++STL FGFG +SS +A +FS S V+++GL++LG+ F+
Sbjct: 228 QSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFV 283
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,055,350,260
Number of Sequences: 518415
Number of Extensions: 203055350260
Number of Successful Extensions: 1243317088
Number of sequences better than 0.0: 0
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