BLASTX 7.6.2
Query= UN56090 /QuerySize=929
(928 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|186510820|ref|NP_001118795.1| Flap endonuclease GEN-like 2 [A... 346 5e-093
gi|186510818|ref|NP_190459.2| Flap endonuclease GEN-like 2 [Arab... 346 5e-093
gi|297816098|ref|XP_002875932.1| hypothetical protein ARALYDRAFT... 329 4e-088
gi|6522575|emb|CAB62019.1| hypothetical protein [Arabidopsis tha... 329 5e-088
gi|225470688|ref|XP_002263340.1| PREDICTED: hypothetical protein... 120 4e-025
gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vini... 120 4e-025
gi|255539481|ref|XP_002510805.1| conserved hypothetical protein ... 116 5e-024
gi|224136982|ref|XP_002322464.1| predicted protein [Populus tric... 102 8e-020
gi|115474331|ref|NP_001060762.1| Os08g0101600 [Oryza sativa Japo... 86 7e-015
gi|218200330|gb|EEC82757.1| hypothetical protein OsI_27475 [Oryz... 86 7e-015
gi|218200332|gb|EEC82759.1| hypothetical protein OsI_27479 [Oryz... 86 7e-015
gi|242080167|ref|XP_002444852.1| hypothetical protein SORBIDRAFT... 86 7e-015
gi|195626660|gb|ACG35160.1| XPG I-region family protein [Zea mays] 82 1e-013
gi|226529749|ref|NP_001149363.1| XPG I-region family protein [Ze... 82 1e-013
>gi|186510820|ref|NP_001118795.1| Flap endonuclease GEN-like 2 [Arabidopsis
thaliana]
Length = 600
Score = 346 bits (885), Expect = 5e-093
Identities = 179/244 (73%), Positives = 207/244 (84%), Gaps = 11/244 (4%)
Frame = -2
Query: 888 VNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKII 709
VN PLHKPQ+PEKCPVSEIIKTRK+QGRECFEVSWNDLEGLE+SIVPADLVERACPEKII
Sbjct: 368 VNLPLHKPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVERACPEKII 427
Query: 708 EFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIEE 529
EFK KM A KKKKPK PK K++ETSSPTK+SSL+ELSL+LQ +DLNS+S ++ ST+EE
Sbjct: 428 EFKEKM-AAKKKKPK---PKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRSTLEE 483
Query: 528 AEQEKEQRKSKKHDYLRLLESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINLISPC 349
AEQE EQ+ SKKHDYLRL++SP +EN + WS G G SS+ YPETEVI+LISPC
Sbjct: 484 AEQENEQQNSKKHDYLRLIDSP-DRENCNNAWSNRDRLGVGMSSFPLYPETEVIDLISPC 542
Query: 348 PEARSRNVSRSYQELKSQEQKCHDQKLENVIELSDSDTDDDDEHCRKARELRMFLKNIRN 169
PEARSR+VSRSY QEQK HD +LE VIELSDS+T DD+EHC+KARELR+FL+NIR
Sbjct: 543 PEARSRSVSRSY-----QEQKSHDHQLETVIELSDSET-DDEEHCKKARELRIFLQNIRK 596
Query: 168 DVIL 157
D+IL
Sbjct: 597 DIIL 600
>gi|186510818|ref|NP_190459.2| Flap endonuclease GEN-like 2 [Arabidopsis
thaliana]
Length = 536
Score = 346 bits (885), Expect = 5e-093
Identities = 179/244 (73%), Positives = 207/244 (84%), Gaps = 11/244 (4%)
Frame = -2
Query: 888 VNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKII 709
VN PLHKPQ+PEKCPVSEIIKTRK+QGRECFEVSWNDLEGLE+SIVPADLVERACPEKII
Sbjct: 304 VNLPLHKPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVERACPEKII 363
Query: 708 EFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIEE 529
EFK KM A KKKKPK PK K++ETSSPTK+SSL+ELSL+LQ +DLNS+S ++ ST+EE
Sbjct: 364 EFKEKM-AAKKKKPK---PKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRSTLEE 419
Query: 528 AEQEKEQRKSKKHDYLRLLESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINLISPC 349
AEQE EQ+ SKKHDYLRL++SP +EN + WS G G SS+ YPETEVI+LISPC
Sbjct: 420 AEQENEQQNSKKHDYLRLIDSP-DRENCNNAWSNRDRLGVGMSSFPLYPETEVIDLISPC 478
Query: 348 PEARSRNVSRSYQELKSQEQKCHDQKLENVIELSDSDTDDDDEHCRKARELRMFLKNIRN 169
PEARSR+VSRSY QEQK HD +LE VIELSDS+T DD+EHC+KARELR+FL+NIR
Sbjct: 479 PEARSRSVSRSY-----QEQKSHDHQLETVIELSDSET-DDEEHCKKARELRIFLQNIRK 532
Query: 168 DVIL 157
D+IL
Sbjct: 533 DIIL 536
>gi|297816098|ref|XP_002875932.1| hypothetical protein ARALYDRAFT_485245
[Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 329 bits (843), Expect = 4e-088
Identities = 175/240 (72%), Positives = 200/240 (83%), Gaps = 11/240 (4%)
Frame = -2
Query: 876 LHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK* 697
L +PQ+PEKCPVSEIIKTRK+QGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK
Sbjct: 372 LLQPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFKE 431
Query: 696 KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIEEAEQE 517
KM A KKKKPK PK K +ETSSPTK+SSL ELSL+LQ +DLNS+S + ST+EEAEQE
Sbjct: 432 KM-AAKKKKPK---PKQKHKETSSPTKSSSLAELSLELQHLDLNSTSLVTRSTVEEAEQE 487
Query: 516 KEQRKSKKHDYLRLLESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINLISPCPEAR 337
E + SKKHDYL L++SP +EN + WST FG GPSS S Y ETEVI+LISPCPEAR
Sbjct: 488 NEVQNSKKHDYLCLIDSP-DRENCNNAWSTRDRFGVGPSSLSLYLETEVIDLISPCPEAR 546
Query: 336 SRNVSRSYQELKSQEQKCHDQKLENVIELSDSDTDDDDEHCRKARELRMFLKNIRNDVIL 157
SR+VSRS+ QEQK HD +LE VIELSDS+T DD+EHC+KARELR+FL+NIR D+IL
Sbjct: 547 SRSVSRSH-----QEQKRHDHQLETVIELSDSET-DDEEHCKKARELRIFLENIRKDIIL 600
>gi|6522575|emb|CAB62019.1| hypothetical protein [Arabidopsis thaliana]
Length = 224
Score = 329 bits (842), Expect = 5e-088
Identities = 171/235 (72%), Positives = 199/235 (84%), Gaps = 11/235 (4%)
Frame = -2
Query: 861 VPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEAK 682
+PEKCPVSEIIKTRK+QGRECFEVSWNDLEGLE+SIVPADLVERACPEKIIEFK KM A
Sbjct: 1 MPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVERACPEKIIEFKEKM-AA 59
Query: 681 KKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIEEAEQEKEQRK 502
KKKKPK PK K++ETSSPTK+SSL+ELSL+LQ +DLNS+S ++ ST+EEAEQE EQ+
Sbjct: 60 KKKKPK---PKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRSTLEEAEQENEQQN 116
Query: 501 SKKHDYLRLLESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINLISPCPEARSRNVS 322
SKKHDYLRL++SP +EN + WS G G SS+ YPETEVI+LISPCPEARSR+VS
Sbjct: 117 SKKHDYLRLIDSP-DRENCNNAWSNRDRLGVGMSSFPLYPETEVIDLISPCPEARSRSVS 175
Query: 321 RSYQELKSQEQKCHDQKLENVIELSDSDTDDDDEHCRKARELRMFLKNIRNDVIL 157
RSY QEQK HD +LE VIELSDS+T DD+EHC+KARELR+FL+NIR D+IL
Sbjct: 176 RSY-----QEQKSHDHQLETVIELSDSET-DDEEHCKKARELRIFLQNIRKDIIL 224
>gi|225470688|ref|XP_002263340.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 561
Score = 120 bits (300), Expect = 4e-025
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 15/203 (7%)
Frame = -2
Query: 891 GVNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKI 712
G++ PLH ++P KCP+S IIK RK+QGRECFEVSW + +GL++SI+PA+LV+ ACPEKI
Sbjct: 363 GIHFPLH--EIPVKCPISGIIKHRKVQGRECFEVSWEEFDGLKSSIIPAELVKSACPEKI 420
Query: 711 IEFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIE 532
+EF+ + +KK+ ++ +PK T L L L ++ + + +S++
Sbjct: 421 VEFEGRKPQEKKQNHRKPRPKKSNNRTPLAEIDKQLQNLLLDIESGGNSFQNVSFSSSMT 480
Query: 531 EAEQEKEQRKSKKHDYLRL---LESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINL 361
++ + + K+ K Y+ L ES N +I G GA VI+L
Sbjct: 481 PSKTQIDATKAAKTQYMLLDTESESDNDNHNEAIICHQNGRCGA----------EIVIDL 530
Query: 360 ISPCPEARSRNVSRSYQELKSQE 292
+SP P R+R VS+ Q Q+
Sbjct: 531 LSPSPAIRARKVSKCQQGNNGQQ 553
>gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 120 bits (300), Expect = 4e-025
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 15/203 (7%)
Frame = -2
Query: 891 GVNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKI 712
G++ PLH ++P KCP+S IIK RK+QGRECFEVSW + +GL++SI+PA+LV+ ACPEKI
Sbjct: 367 GIHFPLH--EIPVKCPISGIIKHRKVQGRECFEVSWEEFDGLKSSIIPAELVKSACPEKI 424
Query: 711 IEFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIE 532
+EF+ + +KK+ ++ +PK T L L L ++ + + +S++
Sbjct: 425 VEFEGRKPQEKKQNHRKPRPKKSNNRTPLAEIDKQLQNLLLDIESGGNSFQNVSFSSSMT 484
Query: 531 EAEQEKEQRKSKKHDYLRL---LESPASKENSSIGWSTVGSFGAGPSSYSFYPETEVINL 361
++ + + K+ K Y+ L ES N +I G GA VI+L
Sbjct: 485 PSKTQIDATKAAKTQYMLLDTESESDNDNHNEAIICHQNGRCGA----------EIVIDL 534
Query: 360 ISPCPEARSRNVSRSYQELKSQE 292
+SP P R+R VS+ Q Q+
Sbjct: 535 LSPSPAIRARKVSKCQQGNNGQQ 557
>gi|255539481|ref|XP_002510805.1| conserved hypothetical protein [Ricinus
communis]
Length = 586
Score = 116 bits (290), Expect = 5e-024
Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 27/212 (12%)
Frame = -2
Query: 891 GVNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKI 712
GVN LH ++P KCPVS IIK RK+QGR+CFEV W +GLETSIVPADLVE ACPEKI
Sbjct: 363 GVNLTLH--EIPVKCPVSGIIKHRKVQGRKCFEVLWEGFDGLETSIVPADLVESACPEKI 420
Query: 711 IEFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNS-------SSF 553
EF+ K +KK+ + + K E T+ + ++L LK +D+ S SF
Sbjct: 421 AEFEEKRALRKKQNQRTLKTKKAENITT-----VAEVDLGLKNLLLDIESESNTVFNDSF 475
Query: 552 LATSTIEEAEQEKEQRKSKKHDYLRLLESPASKENSSIGWSTVGSFGAGPSSYSFYPETE 373
+ ++ E D L ++ES + + + +TV SF A PS P+ +
Sbjct: 476 PSEASTSEDSTTAVAVHCTNQDPL-IVESRSDRGHD----ATVPSFHASPS----LPKID 526
Query: 372 VINLISPCPEARSRNVSRSYQELKSQEQKCHD 277
+I+L+SP P + R V R + KC D
Sbjct: 527 IIDLLSPSPPPQFRMVPR----CQEASDKCID 554
>gi|224136982|ref|XP_002322464.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 102 bits (254), Expect = 8e-020
Identities = 59/118 (50%), Positives = 76/118 (64%), Gaps = 7/118 (5%)
Frame = -2
Query: 891 GVNHPLHKPQVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKI 712
GVN PL K +P KCPVS ++K RK+QG ECFEV W +GL+TSIVPADL+E ACPEKI
Sbjct: 364 GVNLPLQK--IPVKCPVSGVVKQRKVQGTECFEVLWEGFDGLKTSIVPADLLESACPEKI 421
Query: 711 IEFK*KMEAKKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATST 538
EF+ K KK+ Q++P SK+ S A + I+L L+ +D+ S A ST
Sbjct: 422 AEFEEKTALGKKQ--NQRKPGSKK---SGNRLAMAEIDLKLQTLLLDIEPGSNTACST 474
>gi|115474331|ref|NP_001060762.1| Os08g0101600 [Oryza sativa Japonica Group]
Length = 641
Score = 86 bits (211), Expect = 7e-015
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+ G EC+EVSW ++EGL+ S+VP DLV+ ACPEKI EF K
Sbjct: 371 EIPVPCPVLAIVKQRKVHGNECYEVSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGE 430
Query: 684 KKKKKPKQKQPKS 646
+KK+K + + KS
Sbjct: 431 EKKQKRRARPKKS 443
>gi|218200330|gb|EEC82757.1| hypothetical protein OsI_27475 [Oryza sativa Indica
Group]
Length = 305
Score = 86 bits (211), Expect = 7e-015
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+ G EC+EVSW ++EGL+ S+VP DLV+ ACPEKI EF K
Sbjct: 35 EIPVPCPVLAIVKQRKVHGNECYEVSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGE 94
Query: 684 KKKKKPKQKQPKS 646
+KK+K + + KS
Sbjct: 95 EKKQKRRARPKKS 107
>gi|218200332|gb|EEC82759.1| hypothetical protein OsI_27479 [Oryza sativa Indica
Group]
Length = 632
Score = 86 bits (211), Expect = 7e-015
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+ G EC+EVSW ++EGL+ S+VP DLV+ ACPEKI EF K
Sbjct: 362 EIPVPCPVLAIVKQRKVHGNECYEVSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGE 421
Query: 684 KKKKKPKQKQPKS 646
+KK+K + + KS
Sbjct: 422 EKKQKRRARPKKS 434
>gi|242080167|ref|XP_002444852.1| hypothetical protein SORBIDRAFT_07g000270
[Sorghum bicolor]
Length = 698
Score = 86 bits (211), Expect = 7e-015
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+QG E +EVSW +++GL+ S+VP DLV ACPEKI F +A
Sbjct: 373 EMPVPCPVLAIVKQRKVQGSEYYEVSWRNIDGLQVSVVPGDLVRSACPEKITVFLENKDA 432
Query: 684 KKKKKPKQKQPKSKERETSSPTKASSLIELSLKLQQIDLNSSSFLATSTIEEAEQEKEQR 505
+KK+K + + KS + + + L EL L I+ SS+F T+ + + Q
Sbjct: 433 QKKQKRRARPKKSGQAAAALKDVDAQLQEL---LLGIESESSTFPCTANGPQTQTADMQM 489
Query: 504 KSKKHDYLRL 475
+ D++ L
Sbjct: 490 VAPLQDFVDL 499
>gi|195626660|gb|ACG35160.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 82 bits (200), Expect = 1e-013
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+QG E +EVSW +++GL+ S+VP +LV ACPEKI EF +A
Sbjct: 373 EIPVPCPVLAIVKQRKVQGSEYYEVSWRNIDGLQVSVVPGELVRSACPEKITEFLESKDA 432
Query: 684 KKKKKPKQKQPKS 646
+KK+K + + KS
Sbjct: 433 QKKQKRRARPKKS 445
>gi|226529749|ref|NP_001149363.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 82 bits (200), Expect = 1e-013
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = -2
Query: 864 QVPEKCPVSEIIKTRKLQGRECFEVSWNDLEGLETSIVPADLVERACPEKIIEFK*KMEA 685
++P CPV I+K RK+QG E +EVSW +++GL+ S+VP +LV ACPEKI EF +A
Sbjct: 373 EIPVPCPVLAIVKQRKVQGSEYYEVSWRNIDGLQVSVVPGELVRSACPEKITEFLESKDA 432
Query: 684 KKKKKPKQKQPKS 646
+KK+K + + KS
Sbjct: 433 QKKQKRRARPKKS 445
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,776,162,430
Number of Sequences: 15229318
Number of Extensions: 5850776162430
Number of Successful Extensions: 1375091103
Number of sequences better than 0.0: 0
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