BLASTX 7.6.2
Query= UN56403 /QuerySize=675
(674 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18391073|ref|NP_563854.1| DNA polymerase delta subunit 4 [Ara... 228 7e-058
gi|21594051|gb|AAM65969.1| unknown [Arabidopsis thaliana] 227 1e-057
gi|297843782|ref|XP_002889772.1| DNA polymerase delta subunit 4 ... 221 1e-055
gi|255566090|ref|XP_002524033.1| delta DNA polymerase, putative ... 161 1e-037
gi|224126165|ref|XP_002319772.1| predicted protein [Populus tric... 153 3e-035
gi|118482739|gb|ABK93288.1| unknown [Populus trichocarpa] 150 2e-034
gi|224144890|ref|XP_002325451.1| predicted protein [Populus tric... 147 2e-033
gi|225454607|ref|XP_002265281.1| PREDICTED: hypothetical protein... 142 5e-032
gi|147765698|emb|CAN77903.1| hypothetical protein VITISV_024389 ... 142 6e-032
gi|297737224|emb|CBI26425.3| unnamed protein product [Vitis vini... 140 2e-031
gi|116785634|gb|ABK23801.1| unknown [Picea sitchensis] 107 2e-021
gi|115480205|ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japo... 106 5e-021
gi|242049876|ref|XP_002462682.1| hypothetical protein SORBIDRAFT... 105 6e-021
gi|219363563|ref|NP_001136678.1| hypothetical protein LOC1002168... 104 2e-020
gi|326521612|dbj|BAK00382.1| predicted protein [Hordeum vulgare ... 103 3e-020
gi|168058518|ref|XP_001781255.1| predicted protein [Physcomitrel... 98 1e-018
gi|195652963|gb|ACG45949.1| delta DNA polymerase [Zea mays] 92 7e-017
gi|302804997|ref|XP_002984250.1| hypothetical protein SELMODRAFT... 82 4e-014
gi|302781292|ref|XP_002972420.1| hypothetical protein SELMODRAFT... 82 4e-014
gi|242079745|ref|XP_002444641.1| hypothetical protein SORBIDRAFT... 74 1e-011
>gi|18391073|ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis
thaliana]
Length = 124
Score = 228 bits (580), Expect = 7e-058
Identities = 108/124 (87%), Positives = 117/124 (94%)
Frame = +1
Query: 70 MATTAKNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLK 249
MATTAKN+KGFYKQTKSNITGGISKSKPSSRKV+PKHAA QGSD TQPAALISHGS+DL
Sbjct: 1 MATTAKNLKGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLN 60
Query: 250 YDYDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLW 429
DYD++EEMLRQFDMN+ YGPC+GMTRLDRWERA+RLGMNPP+EIEKLLKT KVQ DCLW
Sbjct: 61 EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLW 120
Query: 430 QGRV 441
QGRV
Sbjct: 121 QGRV 124
>gi|21594051|gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 227 bits (577), Expect = 1e-057
Identities = 107/124 (86%), Positives = 117/124 (94%)
Frame = +1
Query: 70 MATTAKNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLK 249
MATTAKN+KGFYKQTKSNITGGISKSKPSSRKV+PKHAA QGSD TQPAALISHGS+DL
Sbjct: 1 MATTAKNLKGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLN 60
Query: 250 YDYDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLW 429
DYD++EEMLRQFDMN+ YGPC+GMTRLDRW+RA+RLGMNPP+EIEKLLKT KVQ DCLW
Sbjct: 61 EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQQDCLW 120
Query: 430 QGRV 441
QGRV
Sbjct: 121 QGRV 124
>gi|297843782|ref|XP_002889772.1| DNA polymerase delta subunit 4 family
[Arabidopsis lyrata subsp. lyrata]
Length = 122
Score = 221 bits (561), Expect = 1e-055
Identities = 105/119 (88%), Positives = 112/119 (94%)
Frame = +1
Query: 85 KNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLKYDYDE 264
KN+KGFYKQTKSNITGGISKSKPSSRKV+PKHAA QGSD QPAALISHGSLDL DYD+
Sbjct: 4 KNLKGFYKQTKSNITGGISKSKPSSRKVTPKHAAAQGSDVIQPAALISHGSLDLNEDYDK 63
Query: 265 KEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
+EEMLRQFDMN+AYGPC+GMTRLDRWERALRLGMNPP+EIEKLLKT KVQ DCLWQGRV
Sbjct: 64 EEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 122
>gi|255566090|ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus
communis]
Length = 126
Score = 161 bits (406), Expect = 1e-037
Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
Frame = +1
Query: 70 MATTAKN-MKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISH-GSLD 243
MAT + N MK FY+Q K+N TG S S +K PKHAA GS+ TQP ALISH G+LD
Sbjct: 1 MATASPNDMKSFYRQKKTNKTGITKSSSKSKKKSPPKHAAAIGSNITQPTALISHGGALD 60
Query: 244 LKYDYDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDC 423
L+ DYD+ EE+LRQFDMNMAYGPC+GMTR+ RWERA RLG+NPP +IE LLK KV +C
Sbjct: 61 LQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSEC 120
Query: 424 LWQGRV 441
LW GRV
Sbjct: 121 LWDGRV 126
>gi|224126165|ref|XP_002319772.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 153 bits (384), Expect = 3e-035
Identities = 78/122 (63%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Frame = +1
Query: 76 TTAKNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLKYD 255
T + NMKGFY+Q K N GI+K SS+K S H A+ GSD TQP A +SHGS D K
Sbjct: 3 TASSNMKGFYRQ-KKNKNSGITK-PTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDY 60
Query: 256 YDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQG 435
YDE EE+LRQFDMNMAYGPC+GM+RL RWERA RLG+NPP+E E LLK E VQ +C W G
Sbjct: 61 YDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDG 120
Query: 436 RV 441
RV
Sbjct: 121 RV 122
>gi|118482739|gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 150 bits (377), Expect = 2e-034
Identities = 77/122 (63%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Frame = +1
Query: 76 TTAKNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLKYD 255
T + NMKGFY+Q K N GI+K SS+K S H A+ GSD TQP A +SHGS D K
Sbjct: 3 TASSNMKGFYRQ-KKNKNSGITK-PTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDY 60
Query: 256 YDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQG 435
YDE E +LRQFDMNMAYGPC+GM+RL RWERA RLG+NPP+E E LLK E VQ +C W G
Sbjct: 61 YDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDG 120
Query: 436 RV 441
RV
Sbjct: 121 RV 122
>gi|224144890|ref|XP_002325451.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 147 bits (369), Expect = 2e-033
Identities = 75/118 (63%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 82 AKNMKGFYKQTKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLKYDYD 261
+ +MKGFY+Q K+ GI K S+ K S HAAT GSD TQP AL+SH S DLK DYD
Sbjct: 5 SSSMKGFYRQKKNK--SGIRK-PTSTSKSSLIHAATLGSDITQPTALVSHDSPDLKDDYD 61
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQG 435
+ E++LRQFDMN AYGPC+GM+RL RWERA RLG+NPP EIE LLK EKV+ +CLW G
Sbjct: 62 KHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDG 119
>gi|225454607|ref|XP_002265281.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 122
Score = 142 bits (357), Expect = 5e-032
Identities = 72/120 (60%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
Frame = +1
Query: 88 NMKGFYKQTKSNITGGISKSKPS--SRKVSPKHAATQGSDATQPAALISHGSLDLKYDYD 261
NMKG++KQ KS GI+K KPS S K+ P H AT GSD QP+ L +H D +YD
Sbjct: 5 NMKGYFKQKKSGGGRGIAKPKPSKKSTKIQPTHVATLGSDVVQPSTLSAHNLQD--DEYD 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
E +LRQFDMNMAYGPC+GM+RL RWERA RLG+NPP EIE LLK K + DCLW G V
Sbjct: 63 GNETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARADCLWDGCV 122
>gi|147765698|emb|CAN77903.1| hypothetical protein VITISV_024389 [Vitis
vinifera]
Length = 122
Score = 142 bits (356), Expect = 6e-032
Identities = 72/120 (60%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
Frame = +1
Query: 88 NMKGFYKQTKSNITGGISKSKPS--SRKVSPKHAATQGSDATQPAALISHGSLDLKYDYD 261
NMKG++KQ KS GI+K KPS S K+ P H AT GSD QP+ L +H D +YD
Sbjct: 5 NMKGYFKQKKSGGGRGIAKPKPSKKSTKIPPTHVATLGSDVVQPSTLSAHNLQD--DEYD 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
E +LRQFDMNMAYGPC+GM+RL RWERA RLG+NPP EIE LLK K + DCLW G V
Sbjct: 63 GNETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARADCLWDGCV 122
>gi|297737224|emb|CBI26425.3| unnamed protein product [Vitis vinifera]
Length = 117
Score = 140 bits (351), Expect = 2e-031
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPS--SRKVSPKHAATQGSDATQPAALISHGSLDLKYDYDE 264
MKG++KQ KS GI+K KPS S K+ P H AT GSD QP+ L +H D +YD
Sbjct: 1 MKGYFKQKKSGGGRGIAKPKPSKKSTKIQPTHVATLGSDVVQPSTLSAHNLQD--DEYDG 58
Query: 265 KEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
E +LRQFDMNMAYGPC+GM+RL RWERA RLG+NPP EIE LLK K + DCLW G V
Sbjct: 59 NETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARADCLWDGCV 117
>gi|116785634|gb|ABK23801.1| unknown [Picea sitchensis]
Length = 135
Score = 107 bits (265), Expect = 2e-021
Identities = 48/85 (56%), Positives = 62/85 (72%)
Frame = +1
Query: 187 TQGSDATQPAALISHGSLDLKYDYDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGM 366
T GSD+ QPAALI+ G D D D EE+LRQFDMNM YGPC+G+ RL+RWERA +LG+
Sbjct: 51 TLGSDSAQPAALIAKGRRDYNDDIDNMEEVLRQFDMNMKYGPCIGVPRLERWERASKLGL 110
Query: 367 NPPSEIEKLLKTEKVQLDCLWQGRV 441
+PP +++ L+ DCLW+GRV
Sbjct: 111 DPPQQVKVFLERAGGISDCLWEGRV 135
>gi|115480205|ref|NP_001063696.1| Os09g0520100 [Oryza sativa Japonica Group]
Length = 131
Score = 106 bits (262), Expect = 5e-021
Identities = 53/105 (50%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPSSRKVSPKH---AATQGSDATQPAALISHGSLDLKYDYD 261
MK FY+Q K GG +K+ SS+K + + A+ SD Q +ALISHG+LDLK D+
Sbjct: 6 MKDFYRQKKK---GGPTKASSSSKKKTQHYTGGASVGASDTAQTSALISHGNLDLKDDFS 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLL 396
E+EE LR FDM+M +GPC+G+TRL RWERA +G++PP + LL
Sbjct: 63 EQEEQLRLFDMDMKFGPCIGVTRLQRWERASAMGLHPPPHLRDLL 107
>gi|242049876|ref|XP_002462682.1| hypothetical protein SORBIDRAFT_02g030140
[Sorghum bicolor]
Length = 131
Score = 105 bits (261), Expect = 6e-021
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 6/105 (5%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPSSRKVSPKH---AATQGSDATQPAALISHGSLDLKYDYD 261
+K FY+Q K GG++K+ SS+K + ++ A+ D Q +AL+SHGS DLK D+
Sbjct: 6 VKDFYRQKKK---GGVTKAAASSKKKTQQYTGGASVGAPDTAQTSALVSHGSWDLKDDFG 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLL 396
++EE LRQFDM+M +GPC+G+TRL RWERA +G++PP+ + LL
Sbjct: 63 DQEEQLRQFDMDMKFGPCIGVTRLQRWERASAMGLHPPAHLRDLL 107
>gi|219363563|ref|NP_001136678.1| hypothetical protein LOC100216808 [Zea mays]
Length = 131
Score = 104 bits (257), Expect = 2e-020
Identities = 50/105 (47%), Positives = 73/105 (69%), Gaps = 6/105 (5%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPSSRKVSPKH---AATQGSDATQPAALISHGSLDLKYDYD 261
+K FY+Q K GG++K+ SS+ + + A+ SDA Q +AL+SHGS DLK D+
Sbjct: 6 VKDFYRQKKK---GGVAKTASSSKNKTRHYTGGASVGASDAAQTSALVSHGSWDLKDDFG 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLL 396
++EE LRQFD++M +GPC+G+TRL RWERA +G+ PP+ + LL
Sbjct: 63 DEEEQLRQFDVDMKFGPCIGVTRLQRWERASAMGLQPPAHLRDLL 107
>gi|326521612|dbj|BAK00382.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 131
Score = 103 bits (255), Expect = 3e-020
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPSSRKVSPKH---AATQGSDATQPAALISHGSLDLKYDYD 261
+K FY+Q K GG K+ SS+K + A+ S+ Q AALISHGS DLK D+
Sbjct: 6 VKDFYRQKKK---GGAGKTSASSKKKPQNYTGGASVGASNKAQTAALISHGSFDLKDDFS 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLL 396
E+EE LRQFDM+M +GPC+G+ RL RWERA +G+ PP + LL
Sbjct: 63 EQEEQLRQFDMDMKFGPCIGVNRLQRWERASAMGLQPPPHLRDLL 107
>gi|168058518|ref|XP_001781255.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 98 bits (242), Expect = 1e-018
Identities = 46/87 (52%), Positives = 63/87 (72%)
Frame = +1
Query: 181 AATQGSDATQPAALISHGSLDLKYDYDEKEEMLRQFDMNMAYGPCVGMTRLDRWERALRL 360
A T G+ +QPAAL+S G DL + D+ EE+LRQFDMNMAYGPC+G++RL+R+ERA RL
Sbjct: 1 AGTLGAADSQPAALVSSGRKDLHEECDDVEEILRQFDMNMAYGPCLGISRLERFERACRL 60
Query: 361 GMNPPSEIEKLLKTEKVQLDCLWQGRV 441
+ PP +++ LL + LW+GRV
Sbjct: 61 NLKPPMDVKNLLMRAGGNPNALWEGRV 87
>gi|195652963|gb|ACG45949.1| delta DNA polymerase [Zea mays]
Length = 94
Score = 92 bits (226), Expect = 7e-017
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
Frame = +1
Query: 91 MKGFYKQTKSNITGGISKSKPSSRKVSPKH---AATQGSDATQPAALISHGSLDLKYDYD 261
+K FY+Q K GG++K+ SS+ + + A+ SDA Q +AL+SHGS DLK D+
Sbjct: 6 VKDFYRQKKK---GGVAKTASSSKNKTRHYTGGASVGASDAAQTSALVSHGSWDLKDDFG 62
Query: 262 EKEEMLRQFDMNMAYGPCVGMTRLDRWERA 351
++EE LRQFD++M +GPC+G+TRL RWERA
Sbjct: 63 DEEEQLRQFDVDMKFGPCIGVTRLQRWERA 92
>gi|302804997|ref|XP_002984250.1| hypothetical protein SELMODRAFT_445786
[Selaginella moellendorffii]
Length = 471
Score = 82 bits (202), Expect = 4e-014
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Frame = +1
Query: 133 GISKSKPSSRKV-SPKHAATQGSDATQPAALI--SHGSLDLKYDYDEKEEMLRQFDMNMA 303
G+S K + + S A S+ AL+ S S D+ D D+ EEMLRQFD++
Sbjct: 366 GMSPQKKKKKIILSDADQAIGASEKRVARALVYPSASSTDVAEDEDDVEEMLRQFDLDAK 425
Query: 304 YGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
+GPCVG++R++RWERA R G+ PP I +L+ + +CLW+GRV
Sbjct: 426 FGPCVGLSRIERWERAQRHGLCPPQNIRDVLERVGGEPNCLWEGRV 471
>gi|302781292|ref|XP_002972420.1| hypothetical protein SELMODRAFT_441751
[Selaginella moellendorffii]
Length = 489
Score = 82 bits (202), Expect = 4e-014
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Frame = +1
Query: 133 GISKSKPSSRKV-SPKHAATQGSDATQPAALI--SHGSLDLKYDYDEKEEMLRQFDMNMA 303
G+S K + + S A S+ AL+ S S D+ D D+ EEMLRQFD++
Sbjct: 384 GMSPQKKKKKIILSDADQAIGASEKRVARALVYPSASSTDVAEDEDDVEEMLRQFDLDAK 443
Query: 304 YGPCVGMTRLDRWERALRLGMNPPSEIEKLLKTEKVQLDCLWQGRV 441
+GPCVG++R++RWERA R G+ PP I +L+ + +CLW+GRV
Sbjct: 444 FGPCVGLSRIERWERAQRHGLCPPQNIRDVLERVGGEPNCLWEGRV 489
>gi|242079745|ref|XP_002444641.1| hypothetical protein SORBIDRAFT_07g025290
[Sorghum bicolor]
Length = 143
Score = 74 bits (181), Expect = 1e-011
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +1
Query: 112 TKSNITGGISKSKPSSRKVSPKHAATQGSDATQPAALISHGSLDLKYDYDEKEEMLRQFD 291
T+ + G + K S K +PK + +G Q A + D Y +EE LRQFD
Sbjct: 4 TRGRLKGIYPERKKGSSKSTPKQKSKKGKSQQQCQA---GDASDSGGGYTAEEEELRQFD 60
Query: 292 MNMAYGPCVGMTRLDRWERALRLGMNPPSEIEKLL 396
M+M+YGPC+G+TRL RWERA +G+ PP + L+
Sbjct: 61 MDMSYGPCIGVTRLRRWERAAAMGLRPPPHLRDLI 95
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,776,162,430
Number of Sequences: 15229318
Number of Extensions: 5850776162430
Number of Successful Extensions: 1375091103
Number of sequences better than 0.0: 0
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