BLASTX 7.6.2
Query= UN56456 /QuerySize=487
(486 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G53910.3 | Symbols: RAP2.12 | RAP2.12; DNA bin... 174 4e-044
TAIR9_protein||AT1G53910.1 | Symbols: RAP2.12 | RAP2.12; DNA bin... 171 2e-043
TAIR9_protein||AT1G53910.2 | Symbols: RAP2.12 | RAP2.12; DNA bin... 171 2e-043
TAIR9_protein||AT3G14230.3 | Symbols: RAP2.2 | RAP2.2; DNA bindi... 154 4e-038
TAIR9_protein||AT3G14230.2 | Symbols: RAP2.2 | RAP2.2; DNA bindi... 153 7e-038
TAIR9_protein||AT3G14230.1 | Symbols: RAP2.2 | RAP2.2; DNA bindi... 153 9e-038
>TAIR9_protein||AT1G53910.3 | Symbols: RAP2.12 | RAP2.12; DNA binding /
transcription factor | chr1:20135242-20136581 FORWARD
Length = 357
Score = 174 bits (439), Expect = 4e-044
Identities = 94/135 (69%), Positives = 101/135 (74%), Gaps = 11/135 (8%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRSRRVTSEFIWPDL KKN KG KKS + RS+ D D EFEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDL---KKNLKGSKKSSKNRSNFFDFDAEFEADFQ 57
Query: 190 RFKDDSSVDVFD-----DVFADVKPFVFTATPNAAVYSAAAASGKKVADSNGQA---AKR 345
FKDDSS+D D DVFADVKPFVFT+TP AV +AA GKKV +G A A R
Sbjct: 58 GFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEVFGKKVTGLDGDAEKSANR 117
Query: 346 KRKSQYRGIRQRPWG 390
KRK+QYRGIRQRPWG
Sbjct: 118 KRKNQYRGIRQRPWG 132
>TAIR9_protein||AT1G53910.1 | Symbols: RAP2.12 | RAP2.12; DNA binding /
transcription factor | chr1:20135242-20136581 FORWARD
Length = 359
Score = 171 bits (432), Expect = 2e-043
Identities = 95/137 (69%), Positives = 102/137 (74%), Gaps = 13/137 (9%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRSRRVTSEFIWPDL KKN KG KKS + RS+ D D EFEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDL---KKNLKGSKKSSKNRSNFFDFDAEFEADFQ 57
Query: 190 RFKDDSSVDVFD-----DVFADVKPFVFTATPNAAVYSAAAAS--GKKVADSNGQA---A 339
FKDDSS+D D DVFADVKPFVFT+TP AV +AA S GKKV +G A A
Sbjct: 58 GFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSA 117
Query: 340 KRKRKSQYRGIRQRPWG 390
RKRK+QYRGIRQRPWG
Sbjct: 118 NRKRKNQYRGIRQRPWG 134
>TAIR9_protein||AT1G53910.2 | Symbols: RAP2.12 | RAP2.12; DNA binding /
transcription factor | chr1:20135242-20136581 FORWARD
Length = 359
Score = 171 bits (432), Expect = 2e-043
Identities = 95/137 (69%), Positives = 102/137 (74%), Gaps = 13/137 (9%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRSRRVTSEFIWPDL KKN KG KKS + RS+ D D EFEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDL---KKNLKGSKKSSKNRSNFFDFDAEFEADFQ 57
Query: 190 RFKDDSSVDVFD-----DVFADVKPFVFTATPNAAVYSAAAAS--GKKVADSNGQA---A 339
FKDDSS+D D DVFADVKPFVFT+TP AV +AA S GKKV +G A A
Sbjct: 58 GFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSA 117
Query: 340 KRKRKSQYRGIRQRPWG 390
RKRK+QYRGIRQRPWG
Sbjct: 118 NRKRKNQYRGIRQRPWG 134
>TAIR9_protein||AT3G14230.3 | Symbols: RAP2.2 | RAP2.2; DNA binding /
transcription factor | chr3:4737616-4739000 REVERSE
Length = 375
Score = 154 bits (387), Expect = 4e-038
Identities = 86/135 (63%), Positives = 95/135 (70%), Gaps = 11/135 (8%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRS RVT+EFIWPDLK K K KK KRS DLDD+FEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNK---VKASKKRSNKRSDFFDLDDDFEADFQ 57
Query: 190 RFKDDSSVDV--FDDVFADVKPFVFTATPN---AAVYSAAAASGKKVADSNGQA---AKR 345
FKDDS+ D DDVF +VKPFVFTAT +A S +A KK +S QA +KR
Sbjct: 58 GFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGSAYAKKTVESAEQAEKSSKR 117
Query: 346 KRKSQYRGIRQRPWG 390
KRK+QYRGIRQRPWG
Sbjct: 118 KRKNQYRGIRQRPWG 132
>TAIR9_protein||AT3G14230.2 | Symbols: RAP2.2 | RAP2.2; DNA binding /
transcription factor | chr3:4737616-4739000 REVERSE
Length = 376
Score = 153 bits (385), Expect = 7e-038
Identities = 86/136 (63%), Positives = 96/136 (70%), Gaps = 12/136 (8%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRS RVT+EFIWPDLK K K KK KRS DLDD+FEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNK---VKASKKRSNKRSDFFDLDDDFEADFQ 57
Query: 190 RFKDDSSVDV--FDDVFADVKPFVFTAT----PNAAVYSAAAASGKKVADSNGQA---AK 342
FKDDS+ D DDVF +VKPFVFTAT +A V + +A KK +S QA +K
Sbjct: 58 GFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTVGSAYAKKTVESAEQAEKSSK 117
Query: 343 RKRKSQYRGIRQRPWG 390
RKRK+QYRGIRQRPWG
Sbjct: 118 RKRKNQYRGIRQRPWG 133
>TAIR9_protein||AT3G14230.1 | Symbols: RAP2.2 | RAP2.2; DNA binding /
transcription factor | chr3:4737616-4739000 REVERSE
Length = 380
Score = 153 bits (384), Expect = 9e-038
Identities = 85/140 (60%), Positives = 95/140 (67%), Gaps = 16/140 (11%)
Frame = +1
Query: 10 MCGGAIISDFIPSPRSRRVTSEFIWPDLKKKKKNAKGLKKSLEKRSSHSDLDDEFEADFQ 189
MCGGAIISDFIP PRS RVT+EFIWPDLK K K KK KRS DLDD+FEADFQ
Sbjct: 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNK---VKASKKRSNKRSDFFDLDDDFEADFQ 57
Query: 190 RFKDDSSVDV--FDDVFADVKPFVFTATP--------NAAVYSAAAASGKKVADSNGQA- 336
FKDDS+ D DDVF +VKPFVFTAT + +Y +A KK +S QA
Sbjct: 58 GFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAE 117
Query: 337 --AKRKRKSQYRGIRQRPWG 390
+KRKRK+QYRGIRQRPWG
Sbjct: 118 KSSKRKRKNQYRGIRQRPWG 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,113,812,746
Number of Sequences: 33410
Number of Extensions: 26113812746
Number of Successful Extensions: 836391469
Number of sequences better than 0.0: 0
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