BLASTX 7.6.2
Query= UN56564 /QuerySize=727
(726 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|71834719|gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinen... 75 6e-012
gi|9989049|gb|AAG10812.1|AC018460_6 Putative retroelement polypr... 75 8e-012
gi|7523671|gb|AAF63111.1|AC006423_12 Similar to gag-pol polyprot... 61 1e-007
gi|4325355|gb|AAD17352.1| contains similarity to retrovirus-rela... 58 1e-006
>gi|71834719|gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]
Length = 1545
Score = 75 bits (184), Expect = 6e-012
Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -2
Query: 722 AKTPLEYGYKVMREGEI-DNQPYTDVKHYRRMVGKLIYLTITGPDVCFAVNQVSQ 561
AK P+E GYK REGE+ D++ + D K YR++VGKLIYLTIT PD+CFAVNQVSQ
Sbjct: 1272 AKMPMEDGYKAPREGELEDSKVFHDPKLYRKLVGKLIYLTITRPDICFAVNQVSQ 1326
>gi|9989049|gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein
[Arabidopsis thaliana]
Length = 1404
Score = 75 bits (183), Expect = 8e-012
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = -2
Query: 722 AKTPLEYGYKVMREGEIDNQPYTDVKHYRRMVGKLIYLTITGPDVCFAVNQVSQ 561
A+TPLE GYKV R+GE +++ + D YR++VGKLIYLT T PD+CFAVNQVSQ
Sbjct: 1156 ARTPLEDGYKVNRKGEKEDEKFGDAPLYRKLVGKLIYLTNTRPDICFAVNQVSQ 1209
>gi|7523671|gb|AAF63111.1|AC006423_12 Similar to gag-pol polyproteins
[Arabidopsis thaliana]
Length = 1014
Score = 61 bits (147), Expect = 1e-007
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -2
Query: 668 NQPYTDVKHYRRMVGKLIYLTITGPDVCFAVNQVSQ 561
N+PY D YRR+VGKLIYLTIT PD+CFAV+QVSQ
Sbjct: 784 NEPYEDFSQYRRLVGKLIYLTITRPDLCFAVHQVSQ 819
>gi|4325355|gb|AAD17352.1| contains similarity to retrovirus-related
polyproteins [Arabidopsis thaliana]
Length = 1366
Score = 58 bits (139), Expect = 1e-006
Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -2
Query: 716 TPLEYGYKVMREGEIDNQPYTDVKHYRRMVGKLIYLTITGPDVCFAVNQVSQLLT 552
TP+E K+ +E D D HYR+++G+L+YLT+T PD+CFAVN+++Q ++
Sbjct: 1159 TPMELNLKLSQE---DGALLLDASHYRKLIGRLVYLTVTRPDICFAVNKLNQYMS 1210
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,776,162,430
Number of Sequences: 15229318
Number of Extensions: 5850776162430
Number of Successful Extensions: 1375091103
Number of sequences better than 0.0: 0
|