BLASTX 7.6.2
Query= UN56647 /QuerySize=778
(777 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog OS... 267 8e-071
sp|Q6STE5|SMRD3_HUMAN SWI/SNF-related matrix-associated actin-de... 55 5e-007
sp|Q6P9Z1|SMRD3_MOUSE SWI/SNF-related matrix-associated actin-de... 54 8e-007
>sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog OS=Arabidopsis
thaliana GN=At5g14170 PE=1 SV=1
Length = 534
Score = 267 bits (681), Expect = 8e-071
Identities = 157/196 (80%), Positives = 163/196 (83%), Gaps = 14/196 (7%)
Frame = +1
Query: 103 PQKPQGSSAAPSPFGNPGMQASASSVPGNQGFTQQQSHMAAPNFPAQFQFSQAQALAHAQ 282
PQKPQGS AP PFGNPGM +++SVPGNQGF QSHMAA NF AQFQFSQAQALAHAQ
Sbjct: 8 PQKPQGS--APLPFGNPGM--ASASVPGNQGFA--QSHMAA-NFQAQFQFSQAQALAHAQ 60
Query: 283 AQSKAQAQFQAQMQAGMSTMNQGQHGGGSS*GGIGVLGSSSSPSMTPGSLNMKRFQQRPS 462
AQSK QAQ QAQ+QA TMNQ Q GS GIG LG SS TPGSLNMKRFQQ+P
Sbjct: 61 AQSKVQAQLQAQLQAQGMTMNQAQ---GSP--GIGGLGPSSPSLTTPGSLNMKRFQQKPP 115
Query: 463 MRPPSGFPASNNNTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLEFE 642
MRPP G PAS NNTISPMRTMELTPAARKKK KLPEKSLQERVAAILPESALYTQLLEFE
Sbjct: 116 MRPP-GAPAS-NNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFE 173
Query: 643 SRVDAALSRKKVDIQE 690
SRVDAAL+RKKVDIQE
Sbjct: 174 SRVDAALTRKKVDIQE 189
>sp|Q6STE5|SMRD3_HUMAN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 OS=Homo sapiens GN=SMARCD3
PE=1 SV=1
Length = 483
Score = 55 bits (131), Expect = 5e-007
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Frame = +1
Query: 406 SPSMTPGSLNMKRFQQRPSMRPPSGFPASNNNTISPMRTMELTPAARK--KKMKLPEKSL 579
SP++ PG R PP G + S + + PA + K+ K+ +K L
Sbjct: 53 SPAVRPGLAPAGMEPARKRAAPPPG----QSQAQSQGQPVPTAPARSRSAKRRKMADKIL 108
Query: 580 QERVAAILPESALYTQLLEFESRVDAALSRKKVDIQE-LSRTLLARRDA*DLRVHTLRSQ 756
+R+ ++PES Y LL FE ++D + RK+VDIQE L R + +R LR++ S
Sbjct: 109 PQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKR---KLRLYI--SN 163
Query: 757 THHPGDP 777
T +P P
Sbjct: 164 TFNPAKP 170
>sp|Q6P9Z1|SMRD3_MOUSE SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 OS=Mus musculus GN=Smarcd3
PE=1 SV=2
Length = 483
Score = 54 bits (129), Expect = 8e-007
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +1
Query: 406 SPSMTPGSLNMKRFQQRPSMRPPSGFPASNNNTISPMRTMELTPAARKKKMKLPEKSLQE 585
SP++ PG R PP G + P+ T + K++ K+ +K L +
Sbjct: 53 SPAVRPGLAPAGMEPARKRAAPPPGQSQAQGQG-QPVPTAPARSRSAKRR-KMADKILPQ 110
Query: 586 RVAAILPESALYTQLLEFESRVDAALSRKKVDIQE-LSRTLLARRDA*DLRVHTLRSQTH 762
R+ ++PES Y LL FE ++D + RK+VDIQE L R + +R LR++ S T
Sbjct: 111 RIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKR---KLRLYI--SNTF 165
Query: 763 HPGDP 777
+P P
Sbjct: 166 NPAKP 170
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,055,350,260
Number of Sequences: 518415
Number of Extensions: 203055350260
Number of Successful Extensions: 1243317088
Number of sequences better than 0.0: 0
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