BLASTX 7.6.2
Query= UN56647 /QuerySize=778
(777 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G14170.1 | Symbols: CHC1 | CHC1 | chr5:4568696... 276 1e-074
TAIR9_protein||AT3G01890.1 | Symbols: | SWIB complex BAF60b dom... 98 4e-021
>TAIR9_protein||AT5G14170.1 | Symbols: CHC1 | CHC1 | chr5:4568696-4570444
REVERSE
Length = 535
Score = 276 bits (705), Expect = 1e-074
Identities = 161/200 (80%), Positives = 167/200 (83%), Gaps = 14/200 (7%)
Frame = +1
Query: 91 NNNNPQKPQGSSAAPSPFGNPGMQASASSVPGNQGFTQQQSHMAAPNFPAQFQFSQAQAL 270
NNNNPQKPQGS AP PFGNPGM +++SVPGNQGF QSHMAA NF AQFQFSQAQAL
Sbjct: 4 NNNNPQKPQGS--APLPFGNPGM--ASASVPGNQGFA--QSHMAA-NFQAQFQFSQAQAL 56
Query: 271 AHAQAQSKAQAQFQAQMQAGMSTMNQGQHGGGSS*GGIGVLGSSSSPSMTPGSLNMKRFQ 450
AHAQAQSK QAQ QAQ+QA TMNQ Q GS GIG LG SS TPGSLNMKRFQ
Sbjct: 57 AHAQAQSKVQAQLQAQLQAQGMTMNQAQ---GSP--GIGGLGPSSPSLTTPGSLNMKRFQ 111
Query: 451 QRPSMRPPSGFPASNNNTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQL 630
Q+P MRPP G PAS NNTISPMRTMELTPAARKKK KLPEKSLQERVAAILPESALYTQL
Sbjct: 112 QKPPMRPP-GAPAS-NNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQL 169
Query: 631 LEFESRVDAALSRKKVDIQE 690
LEFESRVDAAL+RKKVDIQE
Sbjct: 170 LEFESRVDAALTRKKVDIQE 189
>TAIR9_protein||AT3G01890.1 | Symbols: | SWIB complex BAF60b domain-containing
protein | chr3:310332-311772 FORWARD
Length = 459
Score = 98 bits (243), Expect = 4e-021
Identities = 56/85 (65%), Positives = 63/85 (74%), Gaps = 11/85 (12%)
Frame = +1
Query: 439 KRFQQRPSMRPPSGFPASNNNTISPMRTMELTPAARKKKMKLPEK-SLQERVAAILPESA 615
+RF +P + P P S MELTPA+RKKK KLP+K SLQERVAA+LPESA
Sbjct: 55 RRFPHKPPIGGPPAVPPS----------MELTPASRKKKHKLPDKSSLQERVAAVLPESA 104
Query: 616 LYTQLLEFESRVDAALSRKKVDIQE 690
LYTQLLEFESRVDAAL RKKVDIQ+
Sbjct: 105 LYTQLLEFESRVDAALFRKKVDIQD 129
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,156,784,684
Number of Sequences: 33410
Number of Extensions: 26156784684
Number of Successful Extensions: 836404116
Number of sequences better than 0.0: 0
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