BLASTX 7.6.2
Query= UN56751 /QuerySize=778
(777 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 377 7e-105
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 335 2e-092
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 335 2e-092
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 330 5e-091
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 325 3e-089
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 75 4e-014
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 75 4e-014
TAIR9_protein||AT1G34140.1 | Symbols: PAB1 | PAB1 (POLY(A) BINDI... 49 2e-006
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 377 bits (966), Expect = 7e-105
Identities = 192/215 (89%), Positives = 195/215 (90%), Gaps = 3/215 (1%)
Frame = +1
Query: 118 MQNPRFRQ-QQQQQQQAMMQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRS 294
MQNPR +Q QQQQQQQAMMQQQALMQQHSLYHPGVLAP QLEPVPSGNLPPGFDPSTCRS
Sbjct: 1 MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRS 60
Query: 295 VYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 474
VYVGNIH QVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH
Sbjct: 61 VYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 120
Query: 475 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDTRVMWDQK 654
LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDA LYQ FSVFS+CSD RVMWDQK
Sbjct: 121 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQK 180
Query: 655 LG-VQELWVCSFRNQQ-MLNCINEMNGKWLSSRQI 753
G + SFRNQQ INEMNGKWLSSRQI
Sbjct: 181 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQI 215
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 335 bits (859), Expect = 2e-092
Identities = 166/208 (79%), Positives = 179/208 (86%), Gaps = 2/208 (0%)
Frame = +1
Query: 136 RQQQQQQQQAMMQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRSVYVGNIH 315
R +QQQQQQ +M QQALMQQ SLYHPG+LAP Q+EP+PSGNLPPGFDPSTCRSVYVGNIH
Sbjct: 3 RLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIH 62
Query: 316 IQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 495
IQVTEPLLQE+F TGPVES KLIRK+KSSYGFVHYFDRRSA LAILSLNGRHLFGQPIK
Sbjct: 63 IQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIK 122
Query: 496 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDTRVMWDQKLG-VQEL 672
VNWAYA+GQREDTSSHFNIFVGDLSPEVTDA L+ FSV+ TCSD RVMWDQK G +
Sbjct: 123 VNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGF 182
Query: 673 WVCSFRNQQ-MLNCINEMNGKWLSSRQI 753
SFRNQQ I+E+ GKWL SRQI
Sbjct: 183 GFVSFRNQQDAQTAIDEITGKWLGSRQI 210
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 335 bits (859), Expect = 2e-092
Identities = 166/208 (79%), Positives = 179/208 (86%), Gaps = 2/208 (0%)
Frame = +1
Query: 136 RQQQQQQQQAMMQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRSVYVGNIH 315
R +QQQQQQ +M QQALMQQ SLYHPG+LAP Q+EP+PSGNLPPGFDPSTCRSVYVGNIH
Sbjct: 3 RLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIH 62
Query: 316 IQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 495
IQVTEPLLQE+F TGPVES KLIRK+KSSYGFVHYFDRRSA LAILSLNGRHLFGQPIK
Sbjct: 63 IQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIK 122
Query: 496 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDTRVMWDQKLG-VQEL 672
VNWAYA+GQREDTSSHFNIFVGDLSPEVTDA L+ FSV+ TCSD RVMWDQK G +
Sbjct: 123 VNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGF 182
Query: 673 WVCSFRNQQ-MLNCINEMNGKWLSSRQI 753
SFRNQQ I+E+ GKWL SRQI
Sbjct: 183 GFVSFRNQQDAQTAIDEITGKWLGSRQI 210
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 330 bits (846), Expect = 5e-091
Identities = 166/219 (75%), Positives = 184/219 (84%), Gaps = 7/219 (3%)
Frame = +1
Query: 118 MQNPRF----RQQQQQQQQAMMQQQALMQQH-SLYHPGVLAPHQLEPVPSGNLPPGFDPS 282
MQN R +QQQQQQ Q M QQA+MQQH SLYHPGV+AP Q+EP+PSGNLPPGFDP+
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPT 60
Query: 283 TCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSL 462
TCRSVY GNIH QVTE LLQEIF STGP+ES KLIRKDKSSYGFVHYFDRR A++AI++L
Sbjct: 61 TCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTL 120
Query: 463 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDTRVM 642
NGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL+ FS F++CSD RVM
Sbjct: 121 NGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVM 180
Query: 643 WDQKLG-VQELWVCSFRNQQ-MLNCINEMNGKWLSSRQI 753
WDQK G + SFRNQQ INEMNGKW+SSRQI
Sbjct: 181 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQI 219
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 325 bits (831), Expect = 3e-089
Identities = 166/223 (74%), Positives = 184/223 (82%), Gaps = 11/223 (4%)
Frame = +1
Query: 118 MQNPRF----RQQQQQQQQAMMQQQALMQQH-SLYHPGVLAPHQLEPVPSGNLPPGFDPS 282
MQN R +QQQQQQ Q M QQA+MQQH SLYHPGV+AP Q+EP+PSGNLPPGFDP+
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPT 60
Query: 283 TCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSL 462
TCRSVY GNIH QVTE LLQEIF STGP+ES KLIRKDKSSYGFVHYFDRR A++AI++L
Sbjct: 61 TCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTL 120
Query: 463 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCS----D 630
NGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL+ FS F++CS D
Sbjct: 121 NGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRD 180
Query: 631 TRVMWDQKLG-VQELWVCSFRNQQ-MLNCINEMNGKWLSSRQI 753
RVMWDQK G + SFRNQQ INEMNGKW+SSRQI
Sbjct: 181 ARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQI 223
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 75 bits (183), Expect = 4e-014
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Frame = +1
Query: 289 RSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRK----DKSSYGFVHYFDRRSAALAIL 456
R++++G++ V E L F+ TG + S K+IR YGF+ + +A +
Sbjct: 24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQ 83
Query: 457 SLNGRHLFGQPI--KVNWA-YATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSV-FSTC 624
+ NG + G + ++NWA + +GQ+ D +IFVGDL+P+VTD L + F V +S+
Sbjct: 84 TYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSV 143
Query: 625 SDTRVMWDQKLGVQELW-VCSFRNQQMLN-CINEMNGKWLSSR 747
+V+ D G + + F + N + EMNG + S+R
Sbjct: 144 RGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 186
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 75 bits (183), Expect = 4e-014
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Frame = +1
Query: 289 RSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRK----DKSSYGFVHYFDRRSAALAIL 456
R++++G++ V E L F+ TG + S K+IR YGF+ + +A +
Sbjct: 24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQ 83
Query: 457 SLNGRHLFGQPI--KVNWA-YATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSV-FSTC 624
+ NG + G + ++NWA + +GQ+ D +IFVGDL+P+VTD L + F V +S+
Sbjct: 84 TYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSV 143
Query: 625 SDTRVMWDQKLGVQELW-VCSFRNQQMLN-CINEMNGKWLSSR 747
+V+ D G + + F + N + EMNG + S+R
Sbjct: 144 RGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 186
>TAIR9_protein||AT1G34140.1 | Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1);
RNA binding / translation initiation factor | chr1:12433356-12434735
REVERSE
Length = 408
Score = 49 bits (116), Expect = 2e-006
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Frame = +1
Query: 292 SVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKD---KSSYGFVHYFDRRSAALAILSL 462
+V+V N+ + L ++F++ G V S K+ R YGFV ++ S A
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACNFH 91
Query: 463 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDTRVM 642
NG + Q I V + GQ + + N++V +L TDA L ++F F + VM
Sbjct: 92 NGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVM 151
Query: 643 WDQKLGVQELWVCSF-RNQQMLNCINEMNGKWLSSRQI 753
D + + +F + + + I +MNG + +++
Sbjct: 152 KDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKEL 189
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,199,270,239
Number of Sequences: 33410
Number of Extensions: 26199270239
Number of Successful Extensions: 836420141
Number of sequences better than 0.0: 0
|
