BLASTX 7.6.2
Query= UN56932 /QuerySize=822
(821 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALI... 260 7e-070
TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein w... 83 2e-016
TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein w... 83 2e-016
TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein w... 83 2e-016
TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION... 82 4e-016
TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION... 75 3e-014
TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATIO... 73 2e-013
>TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) |
chr3:8876207-8878171 REVERSE
Length = 603
Score = 260 bits (664), Expect = 7e-070
Identities = 134/182 (73%), Positives = 152/182 (83%), Gaps = 11/182 (6%)
Frame = -1
Query: 791 LNVVSVPDLNEEFTQLDSSGGEDNGVPLDSLAEADVGNGNGNGNYNDDDDDTVSNGTQK- 615
LNVVSVPDLNEEFT DSSGGEDNGVPL+SLAEAD G+++D+ DD VSNG +K
Sbjct: 422 LNVVSVPDLNEEFTPPDSSGGEDNGVPLNSLAEAD------GGDHDDNCDDAVSNGRRKN 475
Query: 614 ----MVKSDGSGDDPEFDFLTTRKRKADSNSHESENNECDSSPIDDTLEKCMKVVRWLER 447
+V SDGSGDD FDFL TRKRKA S+S++SEN+ECDSS IDDTLEKC+KV+RWLER
Sbjct: 476 NNDCLVISDGSGDDTGFDFLMTRKRKAISDSNDSENHECDSSSIDDTLEKCVKVIRWLER 535
Query: 446 EGHIQKTFRIRFLTWFGLSSTAQEQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNKRPN 267
EGHI+ TFR+RFLTWF +SSTAQEQSVVSTFVQTLEDDP SLA QL+ F+DVVS KRPN
Sbjct: 536 EGHIKTTFRVRFLTWFSMSSTAQEQSVVSTFVQTLEDDPGSLAGQLVDAFTDVVSTKRPN 595
Query: 266 NG 261
NG
Sbjct: 596 NG 597
>TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14789103 REVERSE
Length = 686
Score = 83 bits (203), Expect = 2e-016
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = -1
Query: 575 DFLTTRKRKADSNSHESENNECDSS--PIDDTLEKCMKVVRWLEREGHIQKTFRIRFLTW 402
D + R+ + + + ++ NN S+ + LE C+K++R LE GHI K FR +FLTW
Sbjct: 561 DEIKNRQARIEISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTW 620
Query: 401 FGLSSTAQEQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNKR 273
+ L +T+QE VV F+ T DDP +LAEQL+ F D VS KR
Sbjct: 621 YSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKR 663
>TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 703
Score = 83 bits (203), Expect = 2e-016
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = -1
Query: 575 DFLTTRKRKADSNSHESENNECDSS--PIDDTLEKCMKVVRWLEREGHIQKTFRIRFLTW 402
D + R+ + + + ++ NN S+ + LE C+K++R LE GHI K FR +FLTW
Sbjct: 578 DEIKNRQARIEISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTW 637
Query: 401 FGLSSTAQEQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNKR 273
+ L +T+QE VV F+ T DDP +LAEQL+ F D VS KR
Sbjct: 638 YSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKR 680
>TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 715
Score = 83 bits (203), Expect = 2e-016
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = -1
Query: 575 DFLTTRKRKADSNSHESENNECDSS--PIDDTLEKCMKVVRWLEREGHIQKTFRIRFLTW 402
D + R+ + + + ++ NN S+ + LE C+K++R LE GHI K FR +FLTW
Sbjct: 590 DEIKNRQARIEISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTW 649
Query: 401 FGLSSTAQEQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNKR 273
+ L +T+QE VV F+ T DDP +LAEQL+ F D VS KR
Sbjct: 650 YSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKR 692
>TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION5/VIN3-LIKE) |
chr2:8167471-8168668 FORWARD
Length = 240
Score = 82 bits (201), Expect = 4e-016
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = -1
Query: 740 SSGGEDNGVPLDSLAEADVGNGNGNGNYNDDDDDTVSNGTQKMVKSDGSGDD--PEFDFL 567
SS G+ N P+ +E + + +N+ D + T G + F +
Sbjct: 56 SSYGKRNNTPVQP-SETETKSQGKRVCFNNSDVRQMKQNTSSRENQFGIKETVLENFPNV 114
Query: 566 TTRKRKADSNSHESENNECDSSP--IDDTLEKCMKVVRWLEREGHIQKTFRIRFLTWFGL 393
T + N H+ + + +P LE+C+K++R LE G+++ TFR +FLTWF L
Sbjct: 115 TPQFMSDQINGHQDKPEKAKKNPESYGLGLEQCVKIIRKLECSGYVESTFRQKFLTWFSL 174
Query: 392 SSTAQEQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNK 276
+T+QE++ V+TF+ DD +LAEQL+ FSD + +K
Sbjct: 175 RATSQERNTVTTFMNAFNDDSMALAEQLVDTFSDCIWSK 213
>TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION INSENSITIVE
3); protein binding / zinc ion binding | chr5:23246538-23249289
REVERSE
Length = 621
Score = 75 bits (184), Expect = 3e-014
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = -1
Query: 557 KRKADSNSHESENNECDSSPIDDTLEKCMKVVRWLEREGHIQKTFRIRFLTWFGLSSTAQ 378
K + S + + E N + D L +K +R LE EGHI K+FR RFLTW+ L +T +
Sbjct: 509 KSRTVSLNEKPEINNAANGVGDKDLGHIVKTIRCLEEEGHIDKSFRERFLTWYSLRATHR 568
Query: 377 EQSVVSTFVQTLEDDPSSLAEQLLHVFSDVVSNKR 273
E VV FV+T +D SSL +QL+ FS+ + +KR
Sbjct: 569 EVRVVKIFVETFMEDLSSLGQQLVDTFSESILSKR 603
>TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATION5/VIN3-LIKE))
| chr2:8176386-8178788 FORWARD
Length = 530
Score = 73 bits (177), Expect = 2e-013
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = -1
Query: 482 EKCMKVVRWLEREGHIQKTFRIRFLTWFGLSSTAQEQSVVSTFVQTLEDDPSSLAEQLLH 303
E+C+ ++R LE G ++ FR +FLTW+ L +T +E+ VV FV T +DD +LA+QL+
Sbjct: 441 EECVNLIRQLECSGQVKSDFRKKFLTWYCLKATDKEKHVVEIFVDTFKDDKEALAKQLID 500
Query: 302 VFSDVVSNKRPNNGS*SIS 246
FSD ++ K P G S S
Sbjct: 501 TFSDCITRKHPEIGGGSES 519
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,199,270,239
Number of Sequences: 33410
Number of Extensions: 26199270239
Number of Successful Extensions: 836420141
Number of sequences better than 0.0: 0
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