Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN57080


BLASTX 7.6.2

Query= UN57080 /QuerySize=705
        (704 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|42567387|ref|NP_195165.2| extra-large GTP-binding protein 2 [...     88   9e-016
gi|4455184|emb|CAB36716.1| extra-large G-protein-like [Arabidops...     88   9e-016
gi|297802534|ref|XP_002869151.1| extra-large GTP-binding protein...     87   2e-015
gi|224103491|ref|XP_002313077.1| predicted protein [Populus tric...     67   2e-009
gi|297745693|emb|CBI40978.3| unnamed protein product [Vitis vini...     60   3e-007
gi|18400284|ref|NP_565553.1| extra-large G-protein 1 [Arabidopsi...     59   7e-007
gi|15451170|gb|AAK96856.1| putative GTP-binding protein (extra l...     59   7e-007
gi|3201682|gb|AAC19353.1| extra-large G-protein [Arabidopsis tha...     58   1e-006
gi|224123232|ref|XP_002330265.1| predicted protein [Populus tric...     57   3e-006
gi|255556179|ref|XP_002519124.1| GTP-binding  protein alpha subu...     57   3e-006

>gi|42567387|ref|NP_195165.2| extra-large GTP-binding protein 2 [Arabidopsis
        thaliana]

          Length = 861

 Score =  88 bits (217), Expect = 9e-016
 Identities = 45/58 (77%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
 Frame = +2

Query: 491 DEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQEALL 664
           D +P  + VYF  RILEISRSEYDPSDMDIL+AEGLSSM+GLSCVDFSFPST+QE  L
Sbjct: 597 DTLP-RNAVYFLERILEISRSEYDPSDMDILQAEGLSSMEGLSCVDFSFPSTSQEESL 653


 Score =  82 bits (200), Expect = 8e-014
 Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = +2

Query: 314 MAAIVRKVSPLPLPTIPKRD-YDDDDDDEFGYSFQTDISFADEYTGPCIANVPRANPLEV 490
           MAA++RK+ P P P  PKRD  + DDDDE    ++ + SFA EY GP IANVPRA P+EV
Sbjct:   1 MAAVIRKLLPFPSPN-PKRDNRESDDDDETSSGYRIEYSFASEYKGPLIANVPRALPVEV 59

Query: 491 DEIPTAHPVYF 523
           D+IPTA PV F
Sbjct:  60 DQIPTALPVSF 70

>gi|4455184|emb|CAB36716.1| extra-large G-protein-like [Arabidopsis thaliana]

          Length = 838

 Score =  88 bits (217), Expect = 9e-016
 Identities = 45/58 (77%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
 Frame = +2

Query: 491 DEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQEALL 664
           D +P  + VYF  RILEISRSEYDPSDMDIL+AEGLSSM+GLSCVDFSFPST+QE  L
Sbjct: 574 DTLP-RNAVYFLERILEISRSEYDPSDMDILQAEGLSSMEGLSCVDFSFPSTSQEESL 630


 Score =  82 bits (200), Expect = 8e-014
 Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = +2

Query: 314 MAAIVRKVSPLPLPTIPKRD-YDDDDDDEFGYSFQTDISFADEYTGPCIANVPRANPLEV 490
           MAA++RK+ P P P  PKRD  + DDDDE    ++ + SFA EY GP IANVPRA P+EV
Sbjct:   1 MAAVIRKLLPFPSPN-PKRDNRESDDDDETSSGYRIEYSFASEYKGPLIANVPRALPVEV 59

Query: 491 DEIPTAHPVYF 523
           D+IPTA PV F
Sbjct:  60 DQIPTALPVSF 70

>gi|297802534|ref|XP_002869151.1| extra-large GTP-binding protein 2 [Arabidopsis
        lyrata subsp. lyrata]

          Length = 859

 Score =  87 bits (215), Expect = 2e-015
 Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
 Frame = +2

Query: 491 DEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQEALL 664
           D +P  + VYF  RILE+SRSEYDPSDMDIL+AEGLSSM+GLSCVDFSFP+T+QE  L
Sbjct: 595 DRLP-RNAVYFLERILEVSRSEYDPSDMDILQAEGLSSMEGLSCVDFSFPTTSQEETL 651


 Score =  69 bits (168), Expect = 4e-010
 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = +2

Query: 323 IVRKVSPLPLPTIPKRDYDDDDDDEFGYSFQTDISFADEYTGPCIANVPRANPLEVDEIP 502
           ++RK+ PLP P  PKR+  + DDD  G   + + SFA EY GP IANVPRA P++VD+IP
Sbjct:   4 VLRKLLPLPSPN-PKRENRESDDD--GDENRIEYSFASEYKGPFIANVPRALPVDVDQIP 60

Query: 503 TAHPVYF 523
           TA PV F
Sbjct:  61 TALPVSF 67

>gi|224103491|ref|XP_002313077.1| predicted protein [Populus trichocarpa]

          Length = 855

 Score =  67 bits (162), Expect = 2e-009
 Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = +2

Query: 446 GPCIANVPRANPLEVDEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCV 625
           G  +A   R N LE+  +P A   YF  R +EI+R +Y PSDMDIL AEG+SS  GLSC+
Sbjct: 584 GAFLATYNRRNELEL--LPRA-ATYFLERAVEIARPDYQPSDMDILYAEGISSSKGLSCM 640

Query: 626 DFSFPSTTQE 655
           +FSFP   Q+
Sbjct: 641 EFSFPKLAQD 650

>gi|297745693|emb|CBI40978.3| unnamed protein product [Vitis vinifera]

          Length = 755

 Score =  60 bits (143), Expect = 3e-007
 Identities = 27/54 (50%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +2

Query: 485 EVDEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPST 646
           E++ +P+    YF  R ++I R++Y+PSD+DIL AEG++S +GL+CVDFSFP +
Sbjct: 491 ELEMLPSV-ASYFLERAVDILRTDYEPSDVDILYAEGVTSSNGLACVDFSFPQS 543

>gi|18400284|ref|NP_565553.1| extra-large G-protein 1 [Arabidopsis thaliana]

          Length = 888

 Score =  59 bits (140), Expect = 7e-007
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +2

Query: 518 YFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQE 655
           YF  R +++   +Y+PSD+DIL AEG++S  GL+C+DFSFP T  E
Sbjct: 642 YFLERAIDVLTPDYEPSDLDILYAEGVTSSSGLACLDFSFPQTASE 687

>gi|15451170|gb|AAK96856.1| putative GTP-binding protein (extra large)
        [Arabidopsis thaliana]

          Length = 779

 Score =  59 bits (140), Expect = 7e-007
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +2

Query: 518 YFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQE 655
           YF  R +++   +Y+PSD+DIL AEG++S  GL+C+DFSFP T  E
Sbjct: 642 YFLERAIDVLTPDYEPSDLDILYAEGVTSSSGLACLDFSFPQTASE 687

>gi|3201682|gb|AAC19353.1| extra-large G-protein [Arabidopsis thaliana]

          Length = 888

 Score =  58 bits (139), Expect = 1e-006
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +2

Query: 518 YFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSFPSTTQE 655
           YF  R +++   +Y+PSD+DIL AEG++S  GL+C+DFSFP T  E
Sbjct: 642 YFLERAIDVLTPDYEPSDVDILYAEGVTSSSGLACLDFSFPQTASE 687

>gi|224123232|ref|XP_002330265.1| predicted protein [Populus trichocarpa]

          Length = 705

 Score =  57 bits (135), Expect = 3e-006
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +2

Query: 458 ANVPRANPLEVDEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSF 637
           A   R N LE+  +P     YF  R +E++R +Y PSDMDIL AEG SS  GLS ++FSF
Sbjct: 438 ATYNRRNELEL--LPRV-ATYFLERAVEVARPDYQPSDMDILYAEGFSSSKGLSSMEFSF 494

Query: 638 PSTTQE 655
           P    +
Sbjct: 495 PKVAPD 500

>gi|255556179|ref|XP_002519124.1| GTP-binding  protein alpha subunit, gna,
        putative [Ricinus communis]

          Length = 928

 Score =  57 bits (135), Expect = 3e-006
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = +2

Query: 458 ANVPRANPLEVDEIPTAHPVYFFVRILEISRSEYDPSDMDILKAEGLSSMDGLSCVDFSF 637
           A   R N LE+  +P A   YF  R +EIS+ EY+P++MDIL  EG++S  GLS ++FSF
Sbjct: 661 ATYSRRNELEL--LPRA-ASYFLERAVEISKPEYEPTNMDILYTEGITSSKGLSSMEFSF 717

Query: 638 PSTTQEA 658
           P   Q++
Sbjct: 718 PIPAQDS 724

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,878,430,556,656
Number of Sequences: 15229318
Number of Extensions: 5878430556656
Number of Successful Extensions: 1392584967
Number of sequences better than 0.0: 0