BLASTX 7.6.2
Query= UN57179 /QuerySize=801
(800 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44030.1 | Symbols: | kelch repeat-containing... 153 2e-037
TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular... 146 2e-035
TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing... 143 1e-034
TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing... 143 1e-034
TAIR9_protein||AT5G03000.1 | Symbols: | kelch repeat-containing... 136 2e-032
TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing... 134 1e-031
TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing... 131 6e-031
TAIR9_protein||AT3G46050.1 | Symbols: | kelch repeat-containing... 126 2e-029
TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular... 126 2e-029
TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 intera... 116 3e-026
TAIR9_protein||AT5G02990.1 | Symbols: | kelch repeat-containing... 105 4e-023
TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing... 79 3e-015
TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing... 79 3e-015
TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing... 79 3e-015
TAIR9_protein||AT4G11770.1 | Symbols: | kelch repeat-containing... 78 7e-015
TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular... 77 1e-014
TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein | ... 77 1e-014
TAIR9_protein||AT3G24610.1 | Symbols: | kelch repeat-containing... 76 2e-014
TAIR9_protein||AT4G19870.1 | Symbols: | kelch repeat-containing... 76 2e-014
TAIR9_protein||AT4G19870.2 | Symbols: | kelch repeat-containing... 76 2e-014
>TAIR9_protein||AT2G44030.1 | Symbols: | kelch repeat-containing F-box family
protein | chr2:18220086-18221228 FORWARD
Length = 381
Score = 153 bits (384), Expect = 2e-037
Identities = 88/191 (46%), Positives = 115/191 (60%), Gaps = 6/191 (3%)
Frame = +3
Query: 135 RVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGL 314
R S SS +SLPYD+V NCL+RVSR+ LSLVSKS SL+A P++ R R+
Sbjct: 8 RSSSSESSPKSFLSLPYDVVFNCLSRVSRTHDPILSLVSKSFRSLLALPDLEAERFRILK 67
Query: 315 REECIYVCLGTNFGTITNPLGWFILRRKGNNRLIPIPIPSFPSPRR--ATYVSMGCGIYV 488
E C+YVCL N NP WFIL + ++LIP+P +P P +T VS G IY+
Sbjct: 68 NETCLYVCLNLNNNNNPNP-SWFILSQTPKHKLIPLPSLPYPDPHPNCSTVVSTGSEIYL 126
Query: 489 IGGRIEAVTTSRVSF-LDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCDDPF--SR 659
+GG + SR ++ LDC++H W LP MR AR EA A V+DGKI V GGC + S
Sbjct: 127 LGGFVAKEKRSRRAYVLDCKSHQWRRLPKMRIARKEAAANVIDGKINVYGGCSSEYHNSV 186
Query: 660 DNPEVFDPMAQ 692
+ E++DPM Q
Sbjct: 187 NWGEIYDPMTQ 197
>TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 5235 Blast hits to 3308 proteins in 165
species: Archae - 10; Bacteria - 167; Metazoa - 4114; Fungi - 13;
Plants - 659; Viruses - 110; Other Eukaryotes - 162 (source: NCBI
BLink). | chr5:19864527-19865645 FORWARD
Length = 373
Score = 146 bits (367), Expect = 2e-035
Identities = 94/203 (46%), Positives = 118/203 (58%), Gaps = 16/203 (7%)
Frame = +3
Query: 114 RKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYE 293
RK+KKR SP S+ + SLP D++ + LARVSR LSLVSKS +LV SPE+Y+
Sbjct: 6 RKRKKRSLEPSPESTPN--PSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPELYK 63
Query: 294 TRSRMGLREECIYVCLGTNFGTITNPLGWFILRRKGNNRL----------IPIPIPSFPS 443
TRS E C+YVCL +F NP WF L RK N + + PIP+ S
Sbjct: 64 TRSFFNRTESCLYVCL--DFPPDPNP-RWFTLYRKPNQNITEKTKNSSGFVLAPIPNHHS 120
Query: 444 PRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKI 623
++ V++G IY IGG IE +S+VS LDCR+HTW E PSMR R A V+DGKI
Sbjct: 121 -HSSSIVAIGSNIYAIGGSIENAPSSKVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKI 179
Query: 624 YVMGGCDDPFSRDNPEVFDPMAQ 692
YV GG ++ S EVFD Q
Sbjct: 180 YVAGGLEEFDSSKWMEVFDIKTQ 202
>TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 143 bits (360), Expect = 1e-034
Identities = 88/196 (44%), Positives = 115/196 (58%), Gaps = 6/196 (3%)
Frame = +3
Query: 114 RKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYE 293
+KK + SP+ ++++SLP D++ + LARVSR D LSLVSKS SL+ASPE+YE
Sbjct: 9 KKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLIASPELYE 68
Query: 294 TRSRMGLREECIYVCLGTNFGTITNPLGWFILRRK---GNNRLIPIPIPSFPSPRRATYV 464
TRS +G E C+Y+CLG + NP WF L RK + + I IP+ + V
Sbjct: 69 TRSLLGRTESCLYLCLG--IPSDFNP-RWFTLCRKPKPSGHVMAAISIPNSRPVHCSGLV 125
Query: 465 SMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCD 644
++G IY IGG I +S VS LDCR HTW + P+M R A V+DGKIYV GG
Sbjct: 126 AVGSDIYNIGGSIINEHSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKIYVAGGSR 185
Query: 645 DPFSRDNPEVFDPMAQ 692
D S + EVFD Q
Sbjct: 186 DSNSSNWMEVFDIKTQ 201
>TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 143 bits (360), Expect = 1e-034
Identities = 88/196 (44%), Positives = 115/196 (58%), Gaps = 6/196 (3%)
Frame = +3
Query: 114 RKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYE 293
+KK + SP+ ++++SLP D++ + LARVSR D LSLVSKS SL+ASPE+YE
Sbjct: 9 KKKTTTSPILSPTPHSTQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLIASPELYE 68
Query: 294 TRSRMGLREECIYVCLGTNFGTITNPLGWFILRRK---GNNRLIPIPIPSFPSPRRATYV 464
TRS +G E C+Y+CLG + NP WF L RK + + I IP+ + V
Sbjct: 69 TRSLLGRTESCLYLCLG--IPSDFNP-RWFTLCRKPKPSGHVMAAISIPNSRPVHCSGLV 125
Query: 465 SMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCD 644
++G IY IGG I +S VS LDCR HTW + P+M R A V+DGKIYV GG
Sbjct: 126 AVGSDIYNIGGSIINEHSSSVSILDCRYHTWRDAPNMLVERNSHAANVIDGKIYVAGGSR 185
Query: 645 DPFSRDNPEVFDPMAQ 692
D S + EVFD Q
Sbjct: 186 DSNSSNWMEVFDIKTQ 201
>TAIR9_protein||AT5G03000.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:703268-704437 FORWARD
Length = 355
Score = 136 bits (342), Expect = 2e-032
Identities = 82/186 (44%), Positives = 110/186 (59%), Gaps = 4/186 (2%)
Frame = +3
Query: 141 ESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLRE 320
+S S + SLP +++ NCLARVSR +LSLV+K SL+ASP++ TRSR+G+ E
Sbjct: 31 KSSDSPPTVFSSLPDELILNCLARVSRFYRPSLSLVNKEFQSLIASPDLEATRSRIGVTE 90
Query: 321 ECIYVCLGTNFGTITNPLGWFILRRKGNNRLIPIPIPSFP--SPRRATYVSMGCGIYVIG 494
+YVCL +N NP WF L + + IPSFP P +T+VS+G IY+IG
Sbjct: 91 NHLYVCLESNKNN-PNP-RWFTLAPIPKEQKVKPIIPSFPYQHPTSSTFVSIGSEIYIIG 148
Query: 495 GRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCDDPFSRDNPEV 674
G ++ + RV LDCR+H LP+M R A A V+DGKIYV+GG + EV
Sbjct: 149 GFVKRKRSRRVLVLDCRSHQCRRLPNMALPRVSAAADVIDGKIYVVGGSKSKNIDNWGEV 208
Query: 675 FDPMAQ 692
FDP Q
Sbjct: 209 FDPETQ 214
>TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18385684-18386811 REVERSE
Length = 376
Score = 134 bits (335), Expect = 1e-031
Identities = 85/201 (42%), Positives = 111/201 (55%), Gaps = 16/201 (7%)
Frame = +3
Query: 117 KKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYET 296
+KK V SP+++ + LP D++ + L+R+SR SLVSKS SL+ASPE+Y+T
Sbjct: 10 QKKTLSLVPSPTTN----LFLPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQT 65
Query: 297 RSRMGLREECIYVCLGTNFGTITNPLGWFILRR---------KGNNRLIPIPIPSFPSPR 449
RS +G E C+YV L + L W+ L R G + L+PI P
Sbjct: 66 RSILGRTESCLYVSLRL---LNDSNLRWYTLCRVPDRKLTNFSGGHLLVPILSRYAPPAH 122
Query: 450 RATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYV 629
++ V++ IY IGG I +S VS LDC+ W E PSMR AR A VLDGKIYV
Sbjct: 123 WSSVVAVDYNIYAIGGPINDAPSSSVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYV 182
Query: 630 MGGCDDPFSRDNPEVFDPMAQ 692
GGC+D S D EVFDP Q
Sbjct: 183 AGGCEDCTSLDCIEVFDPKTQ 203
>TAIR9_protein||AT5G02980.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:697993-699000 FORWARD
Length = 336
Score = 131 bits (328), Expect = 6e-031
Identities = 82/186 (44%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
Frame = +3
Query: 141 ESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLRE 320
ESP S SLPYD++ NCLARVSR LSLVSK SL+AS E+Y TRSR+G E
Sbjct: 6 ESPPPS-RTFSSLPYDIILNCLARVSRYHYPTLSLVSKEFQSLIASRELYATRSRIGKTE 64
Query: 321 ECIYVCLGTNFGTITNP-LGWFILRRKGN-NRLIPIPIPSFPSPRRATYVSMGCGIYVIG 494
+Y+CL T +NP WF L N +L+P+P+ ++ +T S IY+IG
Sbjct: 65 RFLYICLNL---TKSNPKYRWFTLPPVPNEQKLLPVPLFTY-HLNSSTVSSTDSEIYIIG 120
Query: 495 GRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCDDPFSRDNPEV 674
G + + + S DCR+H LP MRF R A A V+DGKIYV+GG EV
Sbjct: 121 GLVWGNRSKKASIFDCRSHQTRRLPKMRFPRASAAAHVIDGKIYVIGG-----GEIRGEV 175
Query: 675 FDPMAQ 692
+DP Q
Sbjct: 176 YDPTTQ 181
>TAIR9_protein||AT3G46050.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:16916072-16917184 FORWARD
Length = 371
Score = 126 bits (315), Expect = 2e-029
Identities = 78/190 (41%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Frame = +3
Query: 126 KRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSR 305
K + S S + SLP D+V NCLARVSR LSLV K SL+ S E++ TRS
Sbjct: 4 KEKNKSSNSPPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSC 63
Query: 306 MGLREECIYVCLGTNFGTITN-PLGWFILRRKGNNRLIPIPIPSFPSPRRATYVSMGCGI 482
+G E +YVCL + + P WFI+ +L PIP + S +T VS+G I
Sbjct: 64 IGKTESFLYVCLDLHRNCYPDCPPRWFIVSPITKQKLKPIPSVTCQS---STVVSIGSKI 120
Query: 483 YVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGCDDPFSRD 662
Y+IGG ++ ++ R+ LDC +H W LP MR R A A V++ KIYV+GG D
Sbjct: 121 YIIGGFVDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIED 180
Query: 663 NPEVFDPMAQ 692
EV+DP Q
Sbjct: 181 WGEVYDPKTQ 190
>TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot, cauline leaf,
stamen, leaf; EXPRESSED DURING: LP.04 four leaves visible, petal
differentiation and expansion stage, LP.08 eight leaves visible;
CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810),
Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch
repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis
thaliana protein match is: kelch repeat-containing F-box family protein
(TAIR:AT4G19870.2); Has 2231 Blast hits to 1863 proteins in 132
species: Archae - 8; Bacteria - 107; Metazoa - 1341; Fungi - 6; Plants
- 633; Viruses - 27; Other Eukaryotes - 109 (source: NCBI BLink). |
chr5:15841885-15843096 REVERSE
Length = 404
Score = 126 bits (315), Expect = 2e-029
Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 18/207 (8%)
Frame = +3
Query: 99 VEQLRRKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVAS 278
+ ++ + K+KR P S LMSLPY++++N LAR+S+ LSLVSKS SL++S
Sbjct: 10 ISEVEQPKEKRSLSSEPPS----LMSLPYEIIENILARISKWSYPNLSLVSKSFLSLLSS 65
Query: 279 PEMYETRSRMGLREECIYVCLGTNFGTITNPLGWFILRRKGNNRLIP---------IPIP 431
P++Y+TRS +G E C+Y CL + ++P W+ L K + L IP+P
Sbjct: 66 PQLYKTRSEIGTTEPCLYFCLES--ANHSSP-QWYTLWMKPDETLTGTGTIHDYSLIPLP 122
Query: 432 SFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELPSMRFARCEANAGVL 611
S R + V++G IYVIGG +S V DCR++TW + P+M AR + A ++
Sbjct: 123 SSSPVLRTSTVAVGSEIYVIGGHFN--RSSSVRIFDCRSNTWRDGPNMTVARSDPVAVLI 180
Query: 612 DGKIYVMGGCDDPFSRDNPEVFDPMAQ 692
D +IYV+GG + S D EVFD Q
Sbjct: 181 DQRIYVLGGREMDESDDWFEVFDIKTQ 207
>TAIR9_protein||AT2G21950.1 | Symbols: SKIP6 | SKIP6 (SKP1 interacting partner
6); ubiquitin-protein ligase | chr2:9353526-9354644 REVERSE
Length = 373
Score = 116 bits (288), Expect = 3e-026
Identities = 73/163 (44%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Frame = +3
Query: 177 LPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLREECIYVCLGTNFG 356
L D+ +CLARV R LSLVSK+ SL SP +Y TR+ +G E +YV +
Sbjct: 24 LSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPLLYATRALVGATENILYVAI----- 78
Query: 357 TITNPLG--WFILRRK----GNNRLIPIPIPSFPSPR--RATYVSMGCGIYVIGGRIEAV 512
I G WF L + N + +PIPS PSP + YV + IYVIGG I V
Sbjct: 79 RIPPESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSLVGSAYVVVDSEIYVIGGSIRDV 138
Query: 513 TTSRVSFLDCRTHTWSELPSMRFARCEANAGVLDGKIYVMGGC 641
+S V LDCR HTW + +MR R A AGV+DGKIYV+GGC
Sbjct: 139 PSSSVWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGC 181
>TAIR9_protein||AT5G02990.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:700169-702630 FORWARD
Length = 549
Score = 105 bits (261), Expect = 4e-023
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Frame = +3
Query: 186 DMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLREECIYVCLGTNFGTIT 365
D ++C V R LSLVSK SL+ASPE+ TRS +G E + VCL N
Sbjct: 227 DPTEDC---VWRFHYPTLSLVSKGFRSLIASPELEATRSFIGETENHLCVCLNLNKNNNY 283
Query: 366 NPLGWFILRRKGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCR 545
NP WF L +L IP P+ +T V+ G IY++GG + ++ RV D R
Sbjct: 284 NP-RWFTLSPIAKQKLKSIPWHRHQYPKSSTVVANGSDIYIVGGFVCGTSSKRVFVFDSR 342
Query: 546 THTWSELPSMRFARCEANAGVLDGKIYVMGGCDDPFSRDNPEVFDPMAQ 692
+H W L MR R A ++D KIYV+GG +D EV+DP Q
Sbjct: 343 SHQWRRLHDMRLPRVSAVVNIVDKKIYVIGGYKPRNIKDCGEVYDPNTQ 391
>TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:6917020-6918138 FORWARD
Length = 345
Score = 79 bits (193), Expect = 3e-015
Identities = 41/84 (48%), Positives = 51/84 (60%)
Frame = +3
Query: 390 RRKGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELP 569
R+ L IPIP P R++ V++G IY IGG I +S VS LDC +HTW E P
Sbjct: 93 RKSSGYVLATIPIPHSPPLHRSSLVAVGSNIYNIGGSISQSQSSSVSILDCWSHTWLEGP 152
Query: 570 SMRFARCEANAGVLDGKIYVMGGC 641
SM+ R +A +LDGKIYV GGC
Sbjct: 153 SMQVEREYPSASLLDGKIYVTGGC 176
>TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18380681-18381859 REVERSE
Length = 393
Score = 79 bits (193), Expect = 3e-015
Identities = 49/101 (48%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Frame = +3
Query: 120 KKKRRRVESPS---SSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMY 290
+KKR+ + PS S + SLP D+V +CLARVSR LSLVSKS SL+ASP++Y
Sbjct: 5 EKKRKTTKKPSPTPQSTTPNPSLPDDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLY 64
Query: 291 ETRSRMGLREECIYVCLGTNFGTITNPLGWFILRRKGNNRL 413
+TRS +G E C+YVCL + NP WF L K N L
Sbjct: 65 KTRSLLGRTESCLYVCLQEK-DSDPNP-RWFTLCLKPNRTL 103
>TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18389436-18390539 REVERSE
Length = 368
Score = 79 bits (193), Expect = 3e-015
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Frame = +3
Query: 174 SLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLREECIYVCLGTNF 353
SLP D+V +CLARVSR LSLVSKS SL+ASP++Y+TRS +G E C+Y+CL +
Sbjct: 16 SLPEDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKTRSLLGRTESCLYLCL--RY 73
Query: 354 GTITNPLGWFILRRKGNNRLI 416
NP WF L RK N R +
Sbjct: 74 SPEDNP-RWFTLCRKPNRRTL 93
>TAIR9_protein||AT4G11770.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:7082279-7083469 REVERSE
Length = 397
Score = 78 bits (190), Expect = 7e-015
Identities = 43/101 (42%), Positives = 57/101 (56%)
Frame = +3
Query: 390 RRKGNNRLIPIPIPSFPSPRRATYVSMGCGIYVIGGRIEAVTTSRVSFLDCRTHTWSELP 569
++ N ++ IP + T ++G IY+IGG I V +SRV FLDCR+HTW E P
Sbjct: 122 KKLSENLMVSIPTSNDCPLSGLTCNTIGSYIYMIGGYINGVLSSRVFFLDCRSHTWHEAP 181
Query: 570 SMRFARCEANAGVLDGKIYVMGGCDDPFSRDNPEVFDPMAQ 692
SM+ AR VLDGKIYV+ G + E+FDP Q
Sbjct: 182 SMQVARKSPLVNVLDGKIYVVEGWRGSDYSNLIEIFDPKTQ 222
>TAIR9_protein||AT5G49000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 1294 Blast hits to 1195 proteins in 89 species:
Archae - 4; Bacteria - 28; Metazoa - 685; Fungi - 4; Plants - 527;
Viruses - 11; Other Eukaryotes - 35 (source: NCBI BLink). |
chr5:19864527-19865645 FORWARD
Length = 329
Score = 77 bits (188), Expect = 1e-014
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Frame = +3
Query: 114 RKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYE 293
RK+KKR SP S+ + SLP D++ + LARVSR LSLVSKS +LV SPE+Y+
Sbjct: 6 RKRKKRSLEPSPESTPN--PSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPELYK 63
Query: 294 TRSRMGLREECIYVCLGTNFGTITNPLGWFILRRKGNNRL 413
TRS E C+YVCL +F NP WF L RK N +
Sbjct: 64 TRSFFNRTESCLYVCL--DFPPDPNP-RWFTLYRKPNQNI 100
>TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein |
chr4:2985051-2985449 REVERSE
Length = 133
Score = 77 bits (187), Expect = 1e-014
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Frame = +3
Query: 171 MSLPYDMVQNCLARVSRSDLGALSLVSKSIHSLVASPEMYETRSRMGLREECIYVCLGTN 350
+SLP+D++ +CLA VSR LSLV K+ SL+ASPE+Y+TRS +G E C+YVCL
Sbjct: 21 LSLPHDVLVSCLAHVSRLHYSILSLVLKNFRSLIASPELYKTRSLLGRIESCLYVCL--R 78
Query: 351 FGTITNPLGWFILRRKGN----------NRLIPIPIPSFPSPRRATYVSMGCGIY 485
F ++P WF L K N N L+P P S +++G IY
Sbjct: 79 FPNESHP-RWFTLYMKPNQIVANNKSNCNLLVPTPTISSSPAHWLCLIAVGSRIY 132
>TAIR9_protein||AT3G24610.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:8975366-8978102 REVERSE
Length = 446
Score = 76 bits (185), Expect = 2e-014
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +3
Query: 60 EKSPRRMMMSVAAVEQLRRKKKKRRRVESPSSSCSRLMSLPYDMVQNCLARVSRSDLGAL 239
E+S + + MS A E + K+R++ SPSSS L SLP + CLARVSR D AL
Sbjct: 97 EQSQKCVTMSNEAPE-VEPHSKRRKKEASPSSSSGFLQSLPEAVAMICLARVSRLDHAAL 155
Query: 240 SLVSKSIHSLVASPEMYETRSRMGLREECIY 332
SLVSKS S+V SPE+Y+TRS +G E+ +Y
Sbjct: 156 SLVSKSCRSMVLSPELYQTRSLIGYAEKFLY 186
>TAIR9_protein||AT4G19870.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:10783054-10784256 REVERSE
Length = 401
Score = 76 bits (185), Expect = 2e-014
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 105 QLRRKKKKRRRV-----ESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSL 269
Q + +KK +R +PSSS L SLP ++V+NCLAR+SRS LS+VSKS S+
Sbjct: 4 QAKPPEKKTKRTTNASSPTPSSSSPSLSSLPDEIVENCLARISRSYYPTLSIVSKSFRSI 63
Query: 270 VASPEMYETRSRMGLREECIYVCL 341
++S E+Y RS + EEC+YVCL
Sbjct: 64 ISSTELYVARSHLRNTEECVYVCL 87
>TAIR9_protein||AT4G19870.2 | Symbols: | kelch repeat-containing F-box family
protein | chr4:10783054-10784256 REVERSE
Length = 401
Score = 76 bits (185), Expect = 2e-014
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 105 QLRRKKKKRRRV-----ESPSSSCSRLMSLPYDMVQNCLARVSRSDLGALSLVSKSIHSL 269
Q + +KK +R +PSSS L SLP ++V+NCLAR+SRS LS+VSKS S+
Sbjct: 4 QAKPPEKKTKRTTNASSPTPSSSSPSLSSLPDEIVENCLARISRSYYPTLSIVSKSFRSI 63
Query: 270 VASPEMYETRSRMGLREECIYVCL 341
++S E+Y RS + EEC+YVCL
Sbjct: 64 ISSTELYVARSHLRNTEECVYVCL 87
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,380,230,284
Number of Sequences: 33410
Number of Extensions: 26380230284
Number of Successful Extensions: 846804232
Number of sequences better than 0.0: 0
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