BLASTX 7.6.2
Query= UN57362 /QuerySize=730
(729 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G22000.1 | Symbols: | F-box family protein | ... 216 1e-056
TAIR9_protein||AT5G44850.1 | Symbols: | FUNCTIONS IN: molecular... 156 2e-038
TAIR9_protein||AT3G49480.1 | Symbols: | FUNCTIONS IN: molecular... 111 8e-025
TAIR9_protein||AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular... 94 1e-019
TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular... 92 3e-019
TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein | ... 91 8e-019
TAIR9_protein||AT5G56325.1 | Symbols: | FUNCTIONS IN: molecular... 90 1e-018
TAIR9_protein||AT5G56380.1 | Symbols: | F-box family protein | ... 89 3e-018
TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein | ... 87 7e-018
TAIR9_protein||AT5G38590.2 | Symbols: | F-box family protein | ... 82 4e-016
TAIR9_protein||AT3G53550.1 | Symbols: | FUNCTIONS IN: molecular... 77 7e-015
TAIR9_protein||AT5G56430.1 | Symbols: | F-box family protein | ... 76 2e-014
TAIR9_protein||AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular... 66 2e-011
TAIR9_protein||AT5G40750.1 | Symbols: | FUNCTIONS IN: molecular... 65 4e-011
TAIR9_protein||AT5G50270.1 | Symbols: | F-box family protein | ... 65 5e-011
TAIR9_protein||AT1G51055.1 | Symbols: | FUNCTIONS IN: molecular... 64 8e-011
TAIR9_protein||AT1G05080.1 | Symbols: | F-box family protein | ... 62 4e-010
TAIR9_protein||AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular... 59 2e-009
TAIR9_protein||AT5G56440.1 | Symbols: | F-box family protein | ... 57 8e-009
>TAIR9_protein||AT1G22000.1 | Symbols: | F-box family protein |
chr1:7744189-7747123 FORWARD
Length = 728
Score = 216 bits (550), Expect = 1e-056
Identities = 117/185 (63%), Positives = 137/185 (74%), Gaps = 3/185 (1%)
Frame = +3
Query: 180 DDLIGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVKHL 359
DDL GSLV+D+PAL ++ L V D CLI+NMS L+EA IS+V YPD+KFL+SLSSVKHL
Sbjct: 253 DDLNGSLVIDSPALKELHLSEVW-DYCLIENMSFLDEAFISNVPYPDEKFLRSLSSVKHL 311
Query: 360 YLCLTNPMVGSSNDVKFSRLIEFYFL-TKTVDWLEPLMFFLQNSAQLKFLTIHTEHESPS 536
+L + MV N +KFS LIEFYF VDWL PLMF LQNS +LK TI + E S
Sbjct: 312 FLLFSKSMVACCNAIKFSWLIEFYFFPISLVDWLMPLMFLLQNSPKLKTPTIDNDFECLS 371
Query: 537 PPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLL-SYILANSECLKRAEINLIATCNLE 713
WNQPSSIPGCL SHLE F W Y GR+D K+LL +YILANS+CLK EI+L+ATCNLE
Sbjct: 372 LSWNQPSSIPGCLLSHLETFRWRGYGGREDAKKLLMTYILANSKCLKTVEISLLATCNLE 431
Query: 714 ERQKE 728
E QKE
Sbjct: 432 ETQKE 436
>TAIR9_protein||AT5G44850.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and
expansion stage, LP.08 eight leaves visible; CONTAINS InterPro
DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST
Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT1G05080.1); Has 469 Blast hits to 454 proteins in 19 species:
Archae - 0; Bacteria - 2; Metazoa - 80; Fungi - 0; Plants - 386;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr5:18108304-18109593 FORWARD
Length = 332
Score = 156 bits (393), Expect = 2e-038
Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 5/186 (2%)
Frame = +3
Query: 174 DDDDLIGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVK 353
DD LI LV+DTPA+ I L + CLI NM CL+ A IS Y DDK +SLSSV
Sbjct: 123 DDASLIRFLVIDTPAVKYIHLTNCSKQYCLIKNMPCLDRAYISVHTYADDKLPRSLSSVL 182
Query: 354 HLYLCLTNPMVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIH---TEH 524
L L L + M+ + + FSRL E DWLEPLM L S +LK L++ TE+
Sbjct: 183 FLELDLADEMLLRCSAINFSRLTELIICPDESDWLEPLMLLLGKSPKLKKLSVDYGPTEN 242
Query: 525 ESPSP-PWNQPSSIPGCLSSHLEIFVW-NNYEGRDDEKQLLSYILANSECLKRAEINLIA 698
P WN+PSS+PGCLSSHLEIF W Y GR +E ++YILANS+CLKRA I+L +
Sbjct: 243 PEDLPLSWNEPSSVPGCLSSHLEIFEWVEKYGGRVEELGFVTYILANSKCLKRATISLRS 302
Query: 699 TCNLEE 716
NLE+
Sbjct: 303 AFNLEQ 308
>TAIR9_protein||AT3G49480.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT1G05080.1); Has 443 Blast hits to 431
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 441; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr3:18342544-18343473 REVERSE
Length = 310
Score = 111 bits (275), Expect = 8e-025
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Frame = +3
Query: 171 DDDDDLIGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSV 350
+D D LV DTP L + + + M L ++ ++P +KF++ LSSV
Sbjct: 97 EDSDMSDPFLVTDTPNLLSLHIFDTVGYSLSVWYMPHLVTV-VTDELFPSEKFMRPLSSV 155
Query: 351 KHLYLCLTNPMVGSSNDV-KFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIHTE-- 521
K+L L + MV + V +SRL+E D LE L+ L ++LK + ++
Sbjct: 156 KYLALSPFDTMVPWCDAVNNYSRLVECMIHLSEYDLLESLLVLLSKCSKLKVFLVDSDIP 215
Query: 522 --HESPSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEINLI 695
+ P+ WNQPSSIP CLSSHLEIF W+ Y GR+DEK+++ YIL NS+ LK A I+
Sbjct: 216 RWNHDPA-LWNQPSSIPRCLSSHLEIFEWDGYVGREDEKKIIRYILENSKYLKTAGISPN 274
Query: 696 ATCNLEERQK 725
+T + EE+QK
Sbjct: 275 STFSGEEKQK 284
>TAIR9_protein||AT5G56570.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT5G56560.1); Has 445 Blast hits to 429 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 440; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr5:22902736-22904404 FORWARD
Length = 440
Score = 94 bits (231), Expect = 1e-019
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Frame = +3
Query: 189 IGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANI--SHVIYPDDKFLKSLSSVKHLY 362
+GS ++ P+L +++ + + ++M + +ANI +H KF++SL+S +HL
Sbjct: 241 LGSFWINVPSLMFLNIKDTFQ--TIFESMPAMIKANIEVAHDQSQSVKFIESLTSTRHLC 298
Query: 363 LCLTNPMVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIHTEHES---P 533
LC N KFS L+ T + W L L ++ L+ LT+ +S P
Sbjct: 299 LCSPTSENPYPNGTKFSNLVHLKLCTCSAGWQNLLACMLNDAPNLRSLTLKLRQKSDVNP 358
Query: 534 SPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRA 680
W +P+ +P CLS+ LEI W +YEG + EK ++ YILAN+ L+RA
Sbjct: 359 KKVWEKPTVVPECLSTRLEILKWRDYEGTEHEKDMVGYILANATFLQRA 407
>TAIR9_protein||AT5G56800.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT5G56560.1); Has 519 Blast hits to 504
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 515; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr5:22972989-22974208 FORWARD
Length = 345
Score = 92 bits (227), Expect = 3e-019
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Frame = +3
Query: 189 IGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVKHLYLC 368
+ V+D P+L +++ + +NM L +AN+ +KF+ S++S++H+ LC
Sbjct: 145 VHGFVIDAPSLRFMNIKDHFSNLLQFENMPKLVKANVEVDCDLSEKFIGSITSIQHISLC 204
Query: 369 LTNPMVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIHTEH-----ESP 533
N + + F L T + DW L L+++ +L+ L + +
Sbjct: 205 SKNSKIPYPSGTSFFYLEHLELCTCSQDWWNLLNRILEDAPRLQVLKLKLGNCVQCSTEL 264
Query: 534 SPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRA 680
WN+P S+P CLSSHLEIF W +Y+G E+++ YILA + CLK A
Sbjct: 265 MDYWNEPCSVPKCLSSHLEIFEWRHYKGTKQERKVAKYILAKASCLKVA 313
>TAIR9_protein||AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 456
Score = 91 bits (223), Expect = 8e-019
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 7/170 (4%)
Frame = +3
Query: 201 VLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVKHLYLCLTNP 380
V++TP L +++ D C ++M L+EAN+ + F +SL+SVK L LCL
Sbjct: 252 VINTPNLKYLNIKDHYTDLCSFEDMPYLDEANLDVAFTHTENFFESLTSVKKLSLCLKKS 311
Query: 381 MVGSSNDVKFSRLIEFYFLT-KTVDWLEPLMFFLQNSAQLKFLTIHTEHES-----PSPP 542
+ FS+L T WL L L +S +L+ L ++ ++ S
Sbjct: 312 NAQYPEGIIFSQLDHLELCTCDDSKWLNILAMLLPDSPKLRVLKLNDKNHDFVDKYCSCT 371
Query: 543 WN-QPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEIN 689
WN QPS +P CL+ LEIF W NY+ E+ + YIL NS CLK+ I+
Sbjct: 372 WNQQPSYVPECLTKSLEIFEWRNYKATFRERDVAVYILKNSTCLKKTVIS 421
>TAIR9_protein||AT5G56325.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: F-box family protein (TAIR:AT5G56390.1); Has
375 Blast hits to 366 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 375; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:22812213-22813193 FORWARD
Length = 265
Score = 90 bits (222), Expect = 1e-018
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Frame = +3
Query: 321 DKFLKSLSSVKHLYLCL-TNPMVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQL 497
++ L S + K+L+LCL T+ V F+RL+ T +W+ LM L+NS L
Sbjct: 105 EQLLGSTTLAKYLHLCLPTSKNVSYPAGNIFNRLVHLRLCTCETEWINLLMRLLRNSPSL 164
Query: 498 KFLTIHTEH----ESPSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSE 665
+ L I H P P W++PSSIP CL+ +LE F W +Y G ++EK++ ++IL +S
Sbjct: 165 RVLEIEQVHYLRYYQPRPCWSEPSSIPECLTHNLETFKWEHYYGAEEEKEVAAFILRSSI 224
Query: 666 CLKRAEINL 692
CLK+A I L
Sbjct: 225 CLKKATIIL 233
>TAIR9_protein||AT5G56380.1 | Symbols: | F-box family protein |
chr5:22838836-22840353 REVERSE
Length = 440
Score = 89 bits (218), Expect = 3e-018
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
Frame = +3
Query: 189 IGSLVLDTPAL------DDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSV 350
I LVLD P+L D L +V E I N++ + +A + +K L SL SV
Sbjct: 234 ISGLVLDAPSLKYLHIVDRSGLFSVSE----IININAVVKATLEVNASRPEKLLYSLVSV 289
Query: 351 KHLYLCLTNPMV------GSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTI 512
+H+ LCL+ V GSS F +L T +WL+ + L++S L+ + I
Sbjct: 290 EHIRLCLSATEVVYPVGLGSS----FHKLKRLEVCTCKSEWLDLFIHLLEDSPSLQDIKI 345
Query: 513 HTEH--ESPSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRA 680
+ H +P P WNQP S+P CLSS LE W Y G +EK+L +Y+ + C K+A
Sbjct: 346 NQCHPVTNPRPQWNQPGSVPRCLSSSLETLEWVEYGGTHEEKELSTYLFKTAVCFKKA 403
>TAIR9_protein||AT5G56560.1 | Symbols: | F-box family protein |
chr5:22899724-22901985 FORWARD
Length = 608
Score = 87 bits (215), Expect = 7e-018
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Frame = +3
Query: 201 VLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVKHLYLCLTNP 380
V+ P+L D++ + + + M + +A+I + F+ SL+S++HL LC
Sbjct: 412 VIKAPSLTDLNFEDTLSNFLMFEPMPEVIKADIQVICDQSKNFIGSLTSIQHLSLCSLTS 471
Query: 381 MVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIHTEHE----SPSPPWN 548
FS L T + W L + +L+ L + ++H+ P W
Sbjct: 472 KTPYPACTVFSSLKYLELCTCSARWANLFACILNAAPELRSLKLKSKHKFNYNDPMTLWE 531
Query: 549 QPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRA 680
+P+ + CLS HLEIF W YEG + E+ + YILAN+ CLK A
Sbjct: 532 EPAVVAKCLSEHLEIFEWRQYEGTEQERNVAGYILANATCLKMA 575
>TAIR9_protein||AT5G38590.2 | Symbols: | F-box family protein |
chr5:15452066-15453455 REVERSE
Length = 411
Score = 82 bits (200), Expect = 4e-016
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Frame = +3
Query: 177 DDDLIGSLVLDTPALDDISL--ITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSV 350
D+ L+ +DTP+L+ + L C+ LI NM L EA + + ++S++SV
Sbjct: 209 DEWLLDGYWIDTPSLEYLKLEDWNSCDHLSLIKNMPKLREAYVDAKCFLPKSVIESITSV 268
Query: 351 KHLYLCLTNPMVGSSNDVKFSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTI-----H 515
KHL +C + G + F++L D L L++S L+ L I H
Sbjct: 269 KHLTICSKD---GYGDGFVFNQLEHLTLCVCRGDSPSLLGQLLKDSPNLRILEISVMEDH 325
Query: 516 TEHESPS-PPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEI 686
+ S WNQPSS+P CL S L+IF W Y GR +++ + YIL N+ LK+ I
Sbjct: 326 VDDVGISLDGWNQPSSVPECLLSSLQIFKWPQYLGRPEDRDIAVYILKNARHLKKTTI 383
>TAIR9_protein||AT3G53550.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G44850.1); Has 264
Blast hits to 243 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr3:19856870-19858308 FORWARD
Length = 257
Score = 77 bits (189), Expect = 7e-015
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +3
Query: 543 WNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEINLIATCN 707
WNQPSS+P CLS+HL+IF W Y GR +EK+++ YILANS+CL+R ++L +T N
Sbjct: 165 WNQPSSVPECLSNHLKIFEWKGYRGRKEEKEIVRYILANSKCLRRIGVSLKSTNN 219
Score = 67 bits (162), Expect = 1e-011
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 174 DDDDLIGSLVLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVK 353
+++ ++G+LV+D+P L I + D N L++A I+ YPD+KF++SLSS+
Sbjct: 53 ENEGIVGTLVIDSPILKKICITDYSGDSYSFGNKPRLDKAKINLFYYPDNKFMRSLSSIM 112
Query: 354 HLYLCLTNPMVGSSNDVKFSRLIEF-YFLTKTVDWLEPLMFFLQNSAQL 497
L L L+ + N FSRLIE + +DWLE LM F Q +L
Sbjct: 113 CLELILSVATLAWLNANNFSRLIECKLIILNELDWLESLMSFKQLEKEL 161
>TAIR9_protein||AT5G56430.1 | Symbols: | F-box family protein |
chr5:22853323-22854575 REVERSE
Length = 361
Score = 76 bits (186), Expect = 2e-014
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Frame = +3
Query: 201 VLDTPALDDISLITVCEDCCLIDNMSCLEEANISHVIYPDDKFLKSLSSVKHLYLCLTNP 380
V++ P+L + ++ C + NM +A I +K L+SL+S K L LCL P
Sbjct: 157 VINAPSLKHLDIVDHFSGFCSLVNMPEQLDAEIHLRHIDSEKLLESLTSSKKLSLCL-KP 215
Query: 381 MVGSSNDVKFSRLIEFYFLTK-TVDWLEPLMFFLQNSAQLKFLTIHTEHE---------S 530
GS F +L+ ++DWL L+ S +L+ L ++ E
Sbjct: 216 QTGSYPGGDFDQLVCLELCVMCSLDWLN---LILRRSPKLRSLKLYQSRERNWSCRNSKH 272
Query: 531 PSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEINLIATCNL 710
W QP+S+P CL LE W Y+G +EK ++ Y+L N +K I + L
Sbjct: 273 VRTKWEQPNSVPECLLVSLETVKWILYKGTQEEKDVVKYLLKNGNFIKTMSIRFSSVVTL 332
Query: 711 EER 719
EER
Sbjct: 333 EER 335
>TAIR9_protein||AT3G10750.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT1G05080.1); Has 597 Blast hits to 573 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:3366927-3368269
FORWARD
Length = 300
Score = 66 bits (159), Expect = 2e-011
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 474 FLQNSAQLKFLTIHTEHESPSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYIL 653
FL + + +K L + WNQPSS+P C+ SHLEI W +EGR +EKQLL+YIL
Sbjct: 221 FLTSFSSVKILPSQPFIDHVPLSWNQPSSVPRCVLSHLEILEWKLFEGRREEKQLLAYIL 280
Query: 654 ANSE 665
NSE
Sbjct: 281 ENSE 284
>TAIR9_protein||AT5G40750.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT1G22000.1); Has 266 Blast hits to 241
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 266; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr5:16308356-16309819 FORWARD
Length = 298
Score = 65 bits (157), Expect = 4e-011
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Frame = +3
Query: 474 FLQNSAQLKFLTIHTEHESPSPPWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYIL 653
F+++ + +++L I + +P+ IP CLS+ L+IF W Y +EKQ+LSYIL
Sbjct: 178 FMRSLSSVRYLEIRLSVAT------KPNDIPPCLSTKLKIFEWKEYGATSEEKQVLSYIL 231
Query: 654 ANSECLKRAEINLIAT 701
ANS+CLKRA I+L +T
Sbjct: 232 ANSKCLKRAGISLKST 247
>TAIR9_protein||AT5G50270.1 | Symbols: | F-box family protein |
chr5:20457487-20458873 FORWARD
Length = 382
Score = 65 bits (156), Expect = 5e-011
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +3
Query: 408 FSRLIEFYFLTKTVDWLEPLMFFLQNSAQLKFLTIHTEHE----SPSPPWNQPSSIPGCL 575
F RL+ T +WL L L+ S +L L + H SPSP + SS+P C+
Sbjct: 271 FHRLVHITLCTCDDEWLNLLACLLKGSPKLISLKLEKHHGHLICSPSPLRDDLSSVPECV 330
Query: 576 SSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEIN 689
S LE W +YEG + E+QL+ +IL N CLK+ I+
Sbjct: 331 LSSLETVEWVDYEGTEAERQLVEFILRNGSCLKKFVIS 368
>TAIR9_protein||AT1G51055.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G56800.1); Has 247
Blast hits to 244 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 247; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:18925286-18926315 REVERSE
Length = 162
Score = 64 bits (154), Expect = 8e-011
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +3
Query: 444 TVDWLEPLMFFLQNSAQLKFLTIH------TEHESPSPPWNQPSSIPGCLSSHLEIFVWN 605
+ +W L L ++ +L+ L + E+ PW QP +P CLSS+LEIF W
Sbjct: 46 STEWWNLLTCILDDAPKLRVLKLKLYRKHCVEYNESMEPWKQPDYVPICLSSYLEIFEWR 105
Query: 606 NYEGRDDEKQLLSYILANSECLKRA 680
Y G + E+++ YIL N+ LK+A
Sbjct: 106 QYNGEEQEREVAKYILENASRLKKA 130
>TAIR9_protein||AT1G05080.1 | Symbols: | F-box family protein |
chr1:1459091-1460579 FORWARD
Length = 440
Score = 62 bits (148), Expect = 4e-010
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +3
Query: 543 WNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEINLIATCNLEE 716
W QPS +P CLSS LEIF W +Y R E++ L+Y+LANS+ LK A I+L NLE+
Sbjct: 361 WKQPSHVPECLSSQLEIFEWRDYGDRIIEEEFLTYVLANSKRLKTATISL--RLNLED 416
>TAIR9_protein||AT4G10420.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match
is: F-box family protein (TAIR:AT4G10400.2); Has 664 Blast hits to 644
proteins in 11 species: Archae - 0; Bacteria - 8; Metazoa - 17; Fungi -
0; Plants - 639; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink). | chr4:6453085-6454209 REVERSE
Length = 323
Score = 59 bits (142), Expect = 2e-009
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Frame = +3
Query: 474 FLQNSAQLKFLTIHTEHESPSP-----PWNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQL 638
FL++S L+ L +E + PWNQPS +P CL S L+ F W+ Y GR ++ +
Sbjct: 216 FLKDSPNLQELEYFSELDDSYENMRMFPWNQPSIVPECLLSSLQKFTWSQYLGRTQDRDI 275
Query: 639 LSYILANSECLKRAEINLIATCNLEE 716
YIL N+ CL+ A I+ TC + E
Sbjct: 276 AVYILKNACCLRNATIDSY-TCLVPE 300
>TAIR9_protein||AT5G56440.1 | Symbols: | F-box family protein |
chr5:22855742-22857117 REVERSE
Length = 431
Score = 57 bits (137), Expect = 8e-009
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 543 WNQPSSIPGCLSSHLEIFVWNNYEGRDDEKQLLSYILANSECLKRAEINLIATCNLEERQ 722
W QPSS+P CL S LE W +Y+GR+ EK+++ Y+L NS LK I + + N E+
Sbjct: 350 WEQPSSVPKCLISSLETVEWIDYKGREVEKKVVMYLLENSRQLKTMAIRSLKSTNDNEKL 409
Query: 723 K 725
K
Sbjct: 410 K 410
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,463,430,430
Number of Sequences: 33410
Number of Extensions: 26463430430
Number of Successful Extensions: 852030556
Number of sequences better than 0.0: 0
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