Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN57516


BLASTX 7.6.2

Query= UN57516 /QuerySize=638
        (637 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||ATCG00680.1 | Symbols: PSBB | encodes for CP47, s...    305   2e-083

>TAIR9_protein||ATCG00680.1 | Symbols: PSBB | encodes for CP47, subunit of the
        photosystem II reaction center. | chrC:72371-73897 FORWARD

          Length = 509

 Score =  305 bits (780), Expect = 2e-083
 Identities = 136/136 (100%)
 Frame = -3

Query: 635 PVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFL 456
           PVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFL
Sbjct:  50 PVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFL 109

Query: 455 AAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVS 276
           AAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVS
Sbjct: 110 AAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVS 169

Query: 275 DPYGLTGKVQPVNPAW 228
           DPYGLTGKVQPVNPAW
Sbjct: 170 DPYGLTGKVQPVNPAW 185

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,463,430,430
Number of Sequences: 33410
Number of Extensions: 26463430430
Number of Successful Extensions: 852030556
Number of sequences better than 0.0: 0