BLASTX 7.6.2
Query= UN57611 /QuerySize=501
(500 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G56110.1 | Symbols: NOP56 | NOP56 (Arabidopsis... 139 1e-033
TAIR9_protein||AT3G12860.1 | Symbols: | nucleolar protein Nop56... 121 4e-028
TAIR9_protein||AT3G05060.1 | Symbols: | SAR DNA-binding protein... 58 2e-009
TAIR9_protein||AT5G57120.1 | Symbols: | FUNCTIONS IN: molecular... 57 4e-009
TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCB... 52 2e-007
TAIR9_protein||AT5G27120.1 | Symbols: | SAR DNA-binding protein... 49 1e-006
TAIR9_protein||AT1G76720.1 | Symbols: | GTP binding / GTPase/ t... 47 7e-006
>TAIR9_protein||AT1G56110.1 | Symbols: NOP56 | NOP56 (Arabidopsis homolog of
nucleolar protein Nop56) | chr1:20984544-20986893 REVERSE
Length = 523
Score = 139 bits (349), Expect = 1e-033
Identities = 79/109 (72%), Positives = 88/109 (80%), Gaps = 5/109 (4%)
Frame = -3
Query: 498 ATTAFGEKLREQVEERLEFYAKGVAPRKNADVMKEVIENLQNKDEEVKETVEASGKKSKK 319
ATTAFGEKLREQVEERLEFY KGVAPRKN DVMKEVIENL+ ++EE KE V+AS KKS K
Sbjct: 392 ATTAFGEKLREQVEERLEFYDKGVAPRKNVDVMKEVIENLK-QEEEGKEPVDASVKKS-K 449
Query: 318 KKKAKGEEEE---AVDEDKSENKKKKEKRKSRGEEETDDGQTQSKKKSK 181
KKKAKGEEEE A++EDKSE KKKKEKRK EE + + + KKSK
Sbjct: 450 KKKAKGEEEEEVVAMEEDKSEKKKKKEKRKMETAEENEKSEKKKTKKSK 498
Score = 64 bits (155), Expect = 3e-011
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = -3
Query: 468 EQVEERLEFYAKGVAPRKNADVMKEVIENLQNKDEEVKETVEASGKKSKKKKKAKGEEEE 289
++V E L+ +G P D + + + K EE +E V KS+KKKK + + E
Sbjct: 425 KEVIENLKQEEEGKEP---VDASVKKSKKKKAKGEEEEEVVAMEEDKSEKKKKKEKRKME 481
Query: 288 AVDEDKSENKKKKEKRKSRGEEETDDGQTQSKKKSKKKKVQ 166
+E++ KKK +K K+ GEEETDDG + KKK K K +
Sbjct: 482 TAEENEKSEKKKTKKSKAGGEEETDDGHSTKKKKKKSKSAE 522
>TAIR9_protein||AT3G12860.1 | Symbols: | nucleolar protein Nop56, putative |
chr3:4091678-4093921 FORWARD
Length = 500
Score = 121 bits (301), Expect = 4e-028
Identities = 69/110 (62%), Positives = 84/110 (76%), Gaps = 7/110 (6%)
Frame = -3
Query: 498 ATTAFGEKLREQVEERLEFYAKGVAPRKNADVMKEVIENLQNKDEEVKETVEASGKKSKK 319
+TTAFGEKLREQVEERL+FY KGVAPRKN DVMKEV+ENL+ KDE K TV+AS KK K+
Sbjct: 392 STTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKEVLENLEKKDEGEK-TVDASEKKKKR 450
Query: 318 KKKAKGEEEEAVDEDKSENKKKKEKRKSRGEE--ETDDGQTQSKKKSKKK 175
K + K EE+E E+KS+ KKKK K GEE TD+G ++ KKK+K +
Sbjct: 451 KTEEKEEEKE---EEKSKKKKKKSK-AVEGEELTATDNGHSKKKKKTKSQ 496
>TAIR9_protein||AT3G05060.1 | Symbols: | SAR DNA-binding protein, putative |
chr3:1413174-1415564 REVERSE
Length = 534
Score = 58 bits (139), Expect = 2e-009
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Frame = -3
Query: 447 EFYAKGVAPRKNADVMKEVIENLQNKDEEVKETVEASGKKSKKKKKAKGEEEEAVDEDKS 268
E AK P K D K+ + +EE E E S K KKKKKA+ E E V+ K
Sbjct: 446 ETSAKSEEPSKKKDKKKK-----KKVEEEKPEEEEPSEK--KKKKKAEAETEAVVEVAKE 498
Query: 267 ENKKKKEKRKSRGEEETDDGQTQSKKKSKKKKVQE* 160
E KK K+KRK EE T+ + KK KKKK ++*
Sbjct: 499 EKKKNKKKRKHEEEETTETPAKKKDKKEKKKKSKD* 534
Score = 47 bits (111), Expect = 4e-006
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -3
Query: 363 EVKETVEASGKKSKKKKKAKGEEEEAVDEDKSENKKKKEKRKSRGEEETDDGQTQSKKKS 184
E E KK KKKK K EEE+ +E+ SE KKKK+K ++ E + + + KK
Sbjct: 446 ETSAKSEEPSKKKDKKKKKKVEEEKPEEEEPSE-KKKKKKAEAETEAVVEVAKEEKKKNK 504
Query: 183 KKKKVQE 163
KK+K +E
Sbjct: 505 KKRKHEE 511
>TAIR9_protein||AT5G57120.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif
(InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949
Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria -
8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548;
Other Eukaryotes - 32748 (source: NCBI BLink). | chr5:23122767-23124400
REVERSE
Length = 331
Score = 57 bits (137), Expect = 4e-009
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = -3
Query: 468 EQVEERLEFYAKGVAPRKNADVMKEVIENLQNKDEEVKET--VEASGKKSKKKKKAKGEE 295
E+V+E GV +K K + ++E+VKET V G K KKKKK+K +
Sbjct: 108 EKVKETDAVIEDGVKEKKKKKETKVKV----TEEEKVKETDAVIEDGVKEKKKKKSKSKS 163
Query: 294 EEAVDEDKSENKKKKEKRKSRGEEETDDGQTQSKKKSKKKKVQE 163
EA D+ + +KK+K +EET+D +SK++ K++ V E
Sbjct: 164 VEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVVE 207
>TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCBF5 | NAP57
(Arabidopsis thaliana homologue of NAP57); pseudouridine synthase |
chr3:21154255-21155952 REVERSE
Length = 566
Score = 52 bits (123), Expect = 2e-007
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Frame = -3
Query: 378 QNKDEEVKETVEASGKKSKKKKKAKGEEEEAVDEDKSENKKKKEKRKSRGEEETDDGQTQ 199
+ K ++ +E E +G + K+KKK K ++EE ++E S +KK+K+KS+ E D + +
Sbjct: 479 KKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKKKKKSKDTEAAVDAEDE 538
Query: 198 S---------KKKSKKKK 172
S KKK KKKK
Sbjct: 539 SAAEKSEKKKKKKDKKKK 556
Score = 50 bits (119), Expect = 5e-007
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Frame = -3
Query: 483 GEKLREQVEERLEFYAKGVAPRKNADVMKEVIENLQNKD--EEVKETVEASGKKSKKKKK 310
GE+ E+V+ + K K + E E + KD EEV E V AS K KKKKK
Sbjct: 466 GEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEV-ASPKSEKKKKK 524
Query: 309 AKGEEEEAVD------EDKSENKKKKEKRKSRGEEETDD 211
+ E AVD +KSE KKKK+ +K + ++ DD
Sbjct: 525 KSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNKDSEDD 563
Score = 49 bits (116), Expect = 1e-006
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = -3
Query: 468 EQVEERLEFYAKGVAPRKNADVMKEVIENLQNKDEEVKET--VEASGK-KSKKKKKAKGE 298
E+++ E G A ++ D + + K + KE EA K KS KKKK K +
Sbjct: 425 EEIKADAENGEAGEARKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDK 484
Query: 297 EEEAVDEDKSENKKKKEKRKSRGEEETDDGQTQSKKKSKKK 175
EEE +E SE K+KK+K+ + E + +S+KK KKK
Sbjct: 485 EEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKKKKK 525
>TAIR9_protein||AT5G27120.1 | Symbols: | SAR DNA-binding protein, putative |
chr5:9541287-9543684 FORWARD
Length = 534
Score = 49 bits (115), Expect = 1e-006
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Frame = -3
Query: 429 VAPRKNADVMKEVIENLQNKDEE--VKETVEASGKKSKKKKKAKGEEEEAVDEDKSENKK 256
+ P K + + + D E VKE KK KKKKK +EEEA E+ S KK
Sbjct: 429 ITPAKTYNTAADSLLQTPTVDSENGVKE------KKDKKKKKKADDEEEAKTEEPS--KK 480
Query: 255 KKEKRKSRGEEETDDGQTQSKKKSKKKKVQE 163
K K+K+ E ET + + +KK K+K +E
Sbjct: 481 KSNKKKTEAEPETAEEPAKKEKKKKRKHEEE 511
>TAIR9_protein||AT1G76720.1 | Symbols: | GTP binding / GTPase/ translation
initiation factor | chr1:28794144-28798780 REVERSE
Length = 1192
Score = 47 bits (109), Expect = 7e-006
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -3
Query: 390 IENLQNKDEEVKETVEASGKKSKKKKKAKGEEEEAVDEDKSENKKKKEKRKSRGEEETDD 211
+EN K+ E KETVE + K KKKKK K +E++A S + K+EK++ E
Sbjct: 280 VENAGEKEGE-KETVETAAAKKKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEPLQP 338
Query: 210 GQTQSKKKSKKKKV 169
+ +K K+ +KK+
Sbjct: 339 KKKDAKGKAAEKKI 352
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,548,767,695
Number of Sequences: 33410
Number of Extensions: 26548767695
Number of Successful Extensions: 857193249
Number of sequences better than 0.0: 0
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