BLASTX 7.6.2
Query= UN57656 /QuerySize=612
(611 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19470.1 | Symbols: | F-box family protein | ... 121 3e-028
TAIR9_protein||AT3G19470.2 | Symbols: | F-box family protein | ... 121 3e-028
TAIR9_protein||AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular... 104 7e-023
TAIR9_protein||AT3G16740.1 | Symbols: | F-box family protein | ... 100 1e-021
TAIR9_protein||AT2G18780.1 | Symbols: | F-box family protein | ... 96 2e-020
TAIR9_protein||AT2G17830.1 | Symbols: | F-box family protein | ... 91 5e-019
TAIR9_protein||AT5G36820.1 | Symbols: | F-box family protein | ... 87 7e-018
TAIR9_protein||AT5G36730.1 | Symbols: | F-box family protein | ... 87 7e-018
TAIR9_protein||AT3G16820.1 | Symbols: | F-box family protein | ... 85 3e-017
TAIR9_protein||AT3G20700.1 | Symbols: | F-box family protein-re... 80 1e-015
TAIR9_protein||AT5G36200.1 | Symbols: | F-box family protein | ... 79 2e-015
TAIR9_protein||AT4G17200.1 | Symbols: | F-box family protein | ... 76 1e-014
TAIR9_protein||AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylgl... 72 3e-013
TAIR9_protein||AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAI... 72 3e-013
TAIR9_protein||AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAI... 72 3e-013
TAIR9_protein||AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAI... 72 3e-013
TAIR9_protein||AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAI... 72 3e-013
TAIR9_protein||AT3G16880.1 | Symbols: | F-box protein-related |... 66 1e-011
TAIR9_protein||AT1G32140.1 | Symbols: | F-box family protein | ... 64 8e-011
TAIR9_protein||AT3G23420.1 | Symbols: | F-box family protein-re... 62 2e-010
>TAIR9_protein||AT3G19470.1 | Symbols: | F-box family protein |
chr3:6749766-6750914 FORWARD
Length = 383
Score = 121 bits (303), Expect = 3e-028
Identities = 80/151 (52%), Positives = 103/151 (68%), Gaps = 13/151 (8%)
Frame = -3
Query: 600 EAMNFDAICFLVCFDFTTETFSPPLPLPFE-AFANETLILSS-SSTSLVVLFQ-CETLEM 430
E M+ D FL+CFDFT+ETF PPLPLPFE A + +T+ +SS LVVL+Q + L++
Sbjct: 225 ETMDTDHF-FLLCFDFTSETFGPPLPLPFEFAVSEDTMSVSSVREEQLVVLYQPWDYLQL 283
Query: 429 EIWISNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKN 250
+IW+++ IE PNA +SWNSKVFLS ++KQL+ P +Q S FFID+EKKVAVVFDK+
Sbjct: 284 DIWVTSKIE--PNA-VSWNSKVFLSVSLKQLVSPQFQLTFGS--FFIDEEKKVAVVFDKD 338
Query: 249 TRNGRATRDIAYIF-VGGGGGVDDDGSSSLK 160
N R+IAYIF V G D G S K
Sbjct: 339 YDN---KRNIAYIFGVDGSFKAVDLGDSDRK 366
>TAIR9_protein||AT3G19470.2 | Symbols: | F-box family protein |
chr3:6749766-6750914 FORWARD
Length = 383
Score = 121 bits (303), Expect = 3e-028
Identities = 80/151 (52%), Positives = 103/151 (68%), Gaps = 13/151 (8%)
Frame = -3
Query: 600 EAMNFDAICFLVCFDFTTETFSPPLPLPFE-AFANETLILSS-SSTSLVVLFQ-CETLEM 430
E M+ D FL+CFDFT+ETF PPLPLPFE A + +T+ +SS LVVL+Q + L++
Sbjct: 225 ETMDTDHF-FLLCFDFTSETFGPPLPLPFEFAVSEDTMSVSSVREEQLVVLYQPWDYLQL 283
Query: 429 EIWISNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKN 250
+IW+++ IE PNA +SWNSKVFLS ++KQL+ P +Q S FFID+EKKVAVVFDK+
Sbjct: 284 DIWVTSKIE--PNA-VSWNSKVFLSVSLKQLVSPQFQLTFGS--FFIDEEKKVAVVFDKD 338
Query: 249 TRNGRATRDIAYIF-VGGGGGVDDDGSSSLK 160
N R+IAYIF V G D G S K
Sbjct: 339 YDN---KRNIAYIFGVDGSFKAVDLGDSDRK 366
>TAIR9_protein||AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527),
F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT2G17830.1); Has 799
Blast hits to 768 proteins in 36 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink). | chr5:16979773-16980939 FORWARD
Length = 389
Score = 104 bits (257), Expect = 7e-023
Identities = 71/166 (42%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANET-----LILSSSSTSLVVLFQCE-TLEMEIWISN 412
FL+CFDFTTE F P LPLPF A + T + S L VLFQ E TL MEIW+++
Sbjct: 230 FLICFDFTTEKFGPRLPLPFNATESPTYEDVVTLSSVGEEQLAVLFQSEYTLMMEIWVTS 289
Query: 411 TIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRA 232
+E + + WN K+FL ++ I H+QFL E+ FFIDQ+K V VVFDK+ +
Sbjct: 290 KVE---STEVLWN-KLFLEVDL-IAISSHFQFLAEAGSFFIDQKKNVVVVFDKD-MDEAT 343
Query: 231 TRDIAYIFVGGGGGVDDDGSSSLKQQVVKESAYPFCYSRAFYYVPS 94
RD+AY+ VG G K+ + E AY C+ YVPS
Sbjct: 344 DRDMAYV-VGKNG--------YFKKVDIGEEAYTSCFPLVCSYVPS 380
>TAIR9_protein||AT3G16740.1 | Symbols: | F-box family protein |
chr3:5699476-5700651 FORWARD
Length = 392
Score = 100 bits (247), Expect = 1e-021
Identities = 62/127 (48%), Positives = 82/127 (64%), Gaps = 8/127 (6%)
Frame = -3
Query: 585 DAICFLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQ-CETLEMEIWISN 412
D FL+CFDFT E F P LPLPF +F +T+ LSS L VLFQ C ++IWIS
Sbjct: 237 DMADFLLCFDFTRERFGPRLPLPFHSFVEDTVTLSSVRDKKLAVLFQPCSASTVKIWISR 296
Query: 411 TIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRA 232
IE PNA +SW KVFL+ ++K L +QF + FF+D++KKVA+V DK+ + +
Sbjct: 297 KIE--PNA-VSWR-KVFLAVDMKSL--TGFQFDINAASFFVDEKKKVAMVLDKDRFSYKF 350
Query: 231 TRDIAYI 211
TR+IAYI
Sbjct: 351 TRNIAYI 357
>TAIR9_protein||AT2G18780.1 | Symbols: | F-box family protein |
chr2:8136983-8138095 REVERSE
Length = 371
Score = 96 bits (236), Expect = 2e-020
Identities = 61/129 (47%), Positives = 81/129 (62%), Gaps = 10/129 (7%)
Frame = -3
Query: 585 DAICFLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQ--CETLEMEIWIS 415
D FL+CFDFTTE F PPLPLPF+ + +T+ LSS + VL Q ++IWIS
Sbjct: 230 DPSYFLLCFDFTTERFRPPLPLPFQPYFGDTVALSSVGDNQIAVLCQRSSSPYTLKIWIS 289
Query: 414 NTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNG- 238
+ +E PNA +SWN K+FL ++K L + + S FF+D+EKK+AVV DKN G
Sbjct: 290 SKVE--PNA-VSWN-KLFLKVDMKPLTGNSFSYSGGS--FFVDEEKKMAVVLDKNIGGGF 343
Query: 237 RATRDIAYI 211
TR+IAYI
Sbjct: 344 DPTRNIAYI 352
>TAIR9_protein||AT2G17830.1 | Symbols: | F-box family protein |
chr2:7754261-7755445 FORWARD
Length = 395
Score = 91 bits (224), Expect = 5e-019
Identities = 66/169 (39%), Positives = 94/169 (55%), Gaps = 21/169 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPF---EAFANETLILSSS--STSLVVLFQCE-TLEMEIWISN 412
FL+CFDFTTE F P LPLPF E+F + ++ SS L +LFQ + TL MEIW+++
Sbjct: 234 FLICFDFTTEKFGPRLPLPFNATESFTYDDVVTLSSVGEEQLALLFQSDATLMMEIWVTS 293
Query: 411 TIEEQPNAGLSWNSKVFLSANIKQLIHPH-WQFLRESVCFFIDQEKKVAVVFDKNTRNGR 235
++ + WN K+FL+ + + + +F+ ++ FFIDQ+K V VVFDK+ N
Sbjct: 294 KVDP---TEVLWN-KLFLAVDHDMIEFDYELKFVADAGSFFIDQKKNVVVVFDKD-MNEH 348
Query: 234 ATRDIAYIFVGGGGGVDDDGSSSLKQQVVKESAYPFCYSRAFYYVPSLV 88
R +AYI VG G K+ + E AY C+ YVPS V
Sbjct: 349 THRGMAYI-VGKNG--------YFKRVDIGEEAYTSCFPLVCSYVPSSV 388
>TAIR9_protein||AT5G36820.1 | Symbols: | F-box family protein |
chr5:14495617-14496849 FORWARD
Length = 411
Score = 87 bits (214), Expect = 7e-018
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQ-CETLEMEIWISNTIEE 400
FL+CFDFTTE F P L LPF + +T+ L+S L VLFQ +TL +E+WI+ IE
Sbjct: 236 FLICFDFTTERFGPRLHLPFHSRCVDTVTLASVREEQLAVLFQDSKTLILEVWITTKIE- 294
Query: 399 QPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRATRDI 220
PNA +SW+SKVFL N+ L +QF R FFI +EK V VV + G R++
Sbjct: 295 -PNA-VSWSSKVFLEVNMSPL--TGFQFNRSFGSFFIVEEKNVVVV---PIKGGHFKRNL 347
Query: 219 AYI 211
AYI
Sbjct: 348 AYI 350
>TAIR9_protein||AT5G36730.1 | Symbols: | F-box family protein |
chr5:14436317-14437549 FORWARD
Length = 411
Score = 87 bits (214), Expect = 7e-018
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQ-CETLEMEIWISNTIEE 400
FL+CFDFTTE F P L LPF + +T+ L+S L VLFQ +TL +E+WI+ IE
Sbjct: 236 FLICFDFTTERFGPRLHLPFHSRCVDTVTLASVREEQLAVLFQDSKTLILEVWITTKIE- 294
Query: 399 QPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRATRDI 220
PNA +SW+SKVFL N+ L +QF R FFI +EK V VV + G R++
Sbjct: 295 -PNA-VSWSSKVFLEVNMSPL--TGFQFNRSFGSFFIVEEKNVVVV---PIKGGHFKRNL 347
Query: 219 AYI 211
AYI
Sbjct: 348 AYI 350
>TAIR9_protein||AT3G16820.1 | Symbols: | F-box family protein |
chr3:5728016-5729174 REVERSE
Length = 314
Score = 85 bits (208), Expect = 3e-017
Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Frame = -3
Query: 579 ICFLVCFDFTTETFSPPLPLPFEAFANETL-ILSSSSTSLVVLFQ-CETLEMEIWISNTI 406
+ FL+CFDFTTE F P L LPF+ E++ +LS+ LV+L+ T+ MEIW+SN I
Sbjct: 164 VSFLICFDFTTERFGPRLTLPFDYSTKESVSLLSAREEQLVLLYHPWFTMMMEIWVSNKI 223
Query: 405 EEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRATR 226
E +SW FL N+ + PH++F V FFID++ KV VV DK+ +R
Sbjct: 224 ELN---AVSWIK--FLEVNM--ITFPHYRFSFHHVSFFIDKKNKVVVVLDKDKET--RSR 274
Query: 225 DIAYIFVGGGG 193
++ Y F+G G
Sbjct: 275 NLGY-FIGDDG 284
>TAIR9_protein||AT3G20700.1 | Symbols: | F-box family protein-related |
chr3:7233525-7234505 REVERSE
Length = 327
Score = 80 bits (195), Expect = 1e-015
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Frame = -3
Query: 576 CFLVCFDFTTETFSPPLPLPFE-AFANETLILSSSSTSLVVLFQ-CETLEMEIWISNTIE 403
CFL CFDFT E F P LPLPF A+ + + + L VLFQ + E+EIW++N IE
Sbjct: 183 CFLFCFDFTRERFGPRLPLPFNGAYVSLSAV---KEEQLAVLFQPSDKSEIEIWVTNKIE 239
Query: 402 EQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRATR- 226
+ +SW+ VFL +K + W FL ID+EKK AVVFDK+ G T
Sbjct: 240 PEE---VSWS--VFLKVEMKLRV-LSWNFL-------IDKEKKFAVVFDKDKAKGFKTNY 286
Query: 225 DIAYIFVGGG 196
DIAY+ G
Sbjct: 287 DIAYVIGENG 296
>TAIR9_protein||AT5G36200.1 | Symbols: | F-box family protein |
chr5:14244106-14246296 REVERSE
Length = 472
Score = 79 bits (192), Expect = 2e-015
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS--SSTSLVVLFQCETLEMEIWISNTIEE 400
FL+CFDFTTE F P L LPF + +++T+ILSS V++ + + MEIW++ IE
Sbjct: 242 FLICFDFTTERFGPRLHLPFHSHSDDTVILSSVREEQLAVLIKRFDLWRMEIWVTTKIEP 301
Query: 399 QPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRATRDI 220
+ +SWN K+FL+ ++ LI +QF +V FFID++K V VV K+ N R +I
Sbjct: 302 KE---VSWN-KLFLAVDMIPLI-TAFQFC--NVSFFIDEKKNVVVVLGKDVLNTRNIANI 354
>TAIR9_protein||AT4G17200.1 | Symbols: | F-box family protein |
chr4:9651108-9652253 FORWARD
Length = 382
Score = 76 bits (186), Expect = 1e-014
Identities = 63/168 (37%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQ-CETLEMEIWISNTIEE 400
FL+CFDFTTE F P LPLPF + ET+ +S L VL+Q ET EIW++ I+
Sbjct: 221 FLLCFDFTTERFGPRLPLPFHSDVLETVAISCVRDDQLAVLYQRFET--WEIWVTTKID- 277
Query: 399 QPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKNTRNGRA---T 229
P A +SW+ +FLS +++ QF E+ FFID+E KVAV F+ + N R
Sbjct: 278 -PTA-VSWS--MFLSVDMEP--PTGCQFDDEAGSFFIDEENKVAVFFNSDLFNPRVENRN 331
Query: 228 RDIAYIFVGGGGGVDDDGSSSLKQQVVKESAYPFCYSRAF-YYVPSLV 88
R ++ G G + +VK Y +C + Y PSLV
Sbjct: 332 RRYPTAYIIGQDGYFKSATLREAPDLVKPDPYVYCCPLVWSSYAPSLV 379
>TAIR9_protein||AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related |
chr1:8817678-8822328 FORWARD
Length = 926
Score = 72 bits (174), Expect = 3e-013
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQCETLE-------MEIWI 418
FL+CFDFTTETF LPLPF + + T+ LS L VL+ E L +E W+
Sbjct: 739 FLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWV 798
Query: 417 SNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRE-SVCFFIDQEKKVAVVFDKNTRN 241
+ +IE PN+ +SW+ FL+ +++ L +F + FFID+++KVAVVFD +
Sbjct: 799 TTSIE--PNS-VSWSK--FLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYL 853
Query: 240 GRATRDIAYIFVGGGGG----VDDDGSSSLKQQVVKESAYPFCYSRAFY----YVPSLVQ 85
+ F+ G G V + ++ + + P Y Y+PSLVQ
Sbjct: 854 STESARYHTAFISGKDGFFKPVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQ 913
Query: 84 LN 79
+N
Sbjct: 914 VN 915
>TAIR9_protein||AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8769741-8771042
FORWARD
Length = 434
Score = 72 bits (174), Expect = 3e-013
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQCETLE-------MEIWI 418
FL+CFDFTTETF LPLPF + + T+ LS L VL+ E L +E W+
Sbjct: 247 FLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWV 306
Query: 417 SNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRE-SVCFFIDQEKKVAVVFDKNTRN 241
+ +IE PN+ +SW+ FL+ +++ L +F + FFID+++KVAVVFD +
Sbjct: 307 TTSIE--PNS-VSWSK--FLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYL 361
Query: 240 GRATRDIAYIFVGGGGG----VDDDGSSSLKQQVVKESAYPFCYSRAFY----YVPSLVQ 85
+ F+ G G V + ++ + + P Y Y+PSLVQ
Sbjct: 362 STESARYHTAFISGKDGFFKPVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQ 421
Query: 84 LN 79
+N
Sbjct: 422 VN 423
>TAIR9_protein||AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25055.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8835405-8836706
FORWARD
Length = 434
Score = 72 bits (174), Expect = 3e-013
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQCETLE-------MEIWI 418
FL+CFDFTTETF LPLPF + + T+ LS L VL+ E L +E W+
Sbjct: 247 FLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWV 306
Query: 417 SNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRE-SVCFFIDQEKKVAVVFDKNTRN 241
+ +IE PN+ +SW+ FL+ +++ L +F + FFID+++KVAVVFD +
Sbjct: 307 TTSIE--PNS-VSWSK--FLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYL 361
Query: 240 GRATRDIAYIFVGGGGG----VDDDGSSSLKQQVVKESAYPFCYSRAFY----YVPSLVQ 85
+ F+ G G V + ++ + + P Y Y+PSLVQ
Sbjct: 362 STESARYHTAFISGKDGFFKPVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQ 421
Query: 84 LN 79
+N
Sbjct: 422 VN 423
>TAIR9_protein||AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8784120-8785421
FORWARD
Length = 434
Score = 72 bits (174), Expect = 3e-013
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQCETLE-------MEIWI 418
FL+CFDFTTETF LPLPF + + T+ LS L VL+ E L +E W+
Sbjct: 247 FLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWV 306
Query: 417 SNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRE-SVCFFIDQEKKVAVVFDKNTRN 241
+ +IE PN+ +SW+ FL+ +++ L +F + FFID+++KVAVVFD +
Sbjct: 307 TTSIE--PNS-VSWSK--FLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYL 361
Query: 240 GRATRDIAYIFVGGGGG----VDDDGSSSLKQQVVKESAYPFCYSRAFY----YVPSLVQ 85
+ F+ G G V + ++ + + P Y Y+PSLVQ
Sbjct: 362 STESARYHTAFISGKDGFFKPVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQ 421
Query: 84 LN 79
+N
Sbjct: 422 VN 423
>TAIR9_protein||AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8806649-8807950
FORWARD
Length = 434
Score = 72 bits (174), Expect = 3e-013
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS-SSTSLVVLFQCETLE-------MEIWI 418
FL+CFDFTTETF LPLPF + + T+ LS L VL+ E L +E W+
Sbjct: 247 FLLCFDFTTETFGLRLPLPFHSTIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWV 306
Query: 417 SNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRE-SVCFFIDQEKKVAVVFDKNTRN 241
+ +IE PN+ +SW+ FL+ +++ L +F + FFID+++KVAVVFD +
Sbjct: 307 TTSIE--PNS-VSWSK--FLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYL 361
Query: 240 GRATRDIAYIFVGGGGG----VDDDGSSSLKQQVVKESAYPFCYSRAFY----YVPSLVQ 85
+ F+ G G V + ++ + + P Y Y+PSLVQ
Sbjct: 362 STESARYHTAFISGKDGFFKPVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQ 421
Query: 84 LN 79
+N
Sbjct: 422 VN 423
>TAIR9_protein||AT3G16880.1 | Symbols: | F-box protein-related |
chr3:5766733-5767830 FORWARD
Length = 366
Score = 66 bits (160), Expect = 1e-011
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Frame = -3
Query: 573 FLVCFDFTTETFSPPLPLPFEAFANETLILSS--SSTSLVVLFQCETLEMEIWISNTIEE 400
FL+ FDFTTE F P LPLPF + + + LSS V+L +C MEIWI+N IE
Sbjct: 216 FLISFDFTTERFGPTLPLPFHSRCGDIVALSSVREEKLAVLLHRCNISRMEIWITNKIE- 274
Query: 399 QPNAGLSWNSKVFLSANIKQLI 334
PN +SW K+FL+ ++K LI
Sbjct: 275 -PN-NVSW-GKLFLTVDMKPLI 293
>TAIR9_protein||AT1G32140.1 | Symbols: | F-box family protein |
chr1:11562742-11564833 REVERSE
Length = 592
Score = 64 bits (153), Expect = 8e-011
Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Frame = -3
Query: 591 NFDAICFLVCFDFTTETFSPPLPLPFEAFANETLILSS---SSTSLVVLFQCETLEM-EI 424
N D F++CFDFTTE F LPLPF+ +T LSS ++ VL+ T M EI
Sbjct: 396 NKDGYDFILCFDFTTERFGQILPLPFKHSFRDTWTLSSVKEEKLAVAVLYWKNTCVMIEI 455
Query: 423 WISNTIEEQPNAGLSWNSKVFLSANIKQLIHPHWQFLRESVCFFIDQEKKVAVVFDKN 250
W+ TI+ PN SW+ FL + K I + +S FFID+EKKV V F +
Sbjct: 456 WM--TIKIDPNVE-SWSK--FLRVDRKPCIDLRFDDRNDS--FFIDEEKKVVVFFSSD 506
>TAIR9_protein||AT3G23420.1 | Symbols: | F-box family protein-related |
chr3:8386273-8387324 REVERSE
Length = 286
Score = 62 bits (150), Expect = 2e-010
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Frame = -3
Query: 519 PFEAFANETLILSS-SSTSLVVLFQ-CETLEMEIWISNTIEEQPNAGLSWNSKVFLSANI 346
P +L+LS+ L VLFQ +TL+MEIW++ IE PN +SW+SK FLS ++
Sbjct: 193 PLSGIFKSSLLLSNVRDEQLAVLFQRMDTLQMEIWVTTKIE--PNT-VSWSSKFFLSVDM 249
Query: 345 KQLIHPHWQFLRESVCFFIDQEKKVAVV 262
++L + F FFID+EKKVAV+
Sbjct: 250 RELTGRYSMFSFSDASFFIDEEKKVAVL 277
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,548,767,695
Number of Sequences: 33410
Number of Extensions: 26548767695
Number of Successful Extensions: 857193249
Number of sequences better than 0.0: 0
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