BLASTX 7.6.2
Query= UN57797 /QuerySize=676
(675 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FUY2|LEUNG_ARATH Transcriptional corepressor LEUNIG OS=Arab... 163 1e-039
sp|O94619|YBKA_SCHPO LisH domain-containing protein C1289.10c OS... 57 7e-008
sp|Q98948|SSBP3_CHICK Single-stranded DNA-binding protein 3 OS=G... 53 1e-006
sp|Q9BWW4|SSBP3_HUMAN Single-stranded DNA-binding protein 3 OS=H... 53 1e-006
sp|Q9D032|SSBP3_MOUSE Single-stranded DNA-binding protein 3 OS=M... 53 1e-006
sp|Q9R050|SSBP3_RAT Single-stranded DNA-binding protein 3 OS=Rat... 53 1e-006
sp|P81877|SSBP2_HUMAN Single-stranded DNA-binding protein 2 OS=H... 53 2e-006
sp|Q9CYZ8|SSBP2_MOUSE Single-stranded DNA-binding protein 2 OS=M... 53 2e-006
sp|Q9BWG4|SSBP4_HUMAN Single-stranded DNA-binding protein 4 OS=H... 52 4e-006
>sp|Q9FUY2|LEUNG_ARATH Transcriptional corepressor LEUNIG OS=Arabidopsis
thaliana GN=LUG PE=1 SV=2
Length = 931
Score = 163 bits (411), Expect = 1e-039
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = +1
Query: 175 MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFW 354
M+Q+NWEADKMLDVYI+DYLVK+ L TA++F EGKVS DPVAIDAPGGFLFEWWSVFW
Sbjct: 1 MSQTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW 60
Query: 355 DIFIARTNEKHSESAAAYIEAQQGKAKEQQMQLQQMQMMRQAHMQQRR 498
DIFIARTNEKHSE AA+YIE Q KA+EQQ+Q Q + Q QQ++
Sbjct: 61 DIFIARTNEKHSEVAASYIETQMIKAREQQLQQSQHPQVSQQQQQQQQ 108
>sp|O94619|YBKA_SCHPO LisH domain-containing protein C1289.10c
OS=Schizosaccharomyces pombe GN=SPBC1289.10c PE=1 SV=1
Length = 743
Score = 57 bits (137), Expect = 7e-008
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 265 SFMTEGKVSPDPV-AIDAPGGFLFEWWSVFWDIFIARTNEKHSESAAAYIEAQQGKAKEQ 441
SF + P P+ ID+ GGFL EWW+VFWDI+ AR + SE A AY+ K+
Sbjct: 117 SFSSSSAPPPPPILPIDSAGGFLIEWWNVFWDIYNARRGQ-GSEPAKAYMSHISNLRKKS 175
Query: 442 QMQLQQMQ 465
++ LQ++Q
Sbjct: 176 RLNLQEIQ 183
>sp|Q98948|SSBP3_CHICK Single-stranded DNA-binding protein 3 OS=Gallus gallus
GN=SSBP3 PE=2 SV=3
Length = 368
Score = 53 bits (126), Expect = 1e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 12 SDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 70
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 71 CAAPERRDTCEHSSEAKAF 89
>sp|Q9BWW4|SSBP3_HUMAN Single-stranded DNA-binding protein 3 OS=Homo sapiens
GN=SSBP3 PE=1 SV=1
Length = 388
Score = 53 bits (126), Expect = 1e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 12 SDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 70
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 71 CAAPERRDTCEHSSEAKAF 89
>sp|Q9D032|SSBP3_MOUSE Single-stranded DNA-binding protein 3 OS=Mus musculus
GN=Ssbp3 PE=2 SV=2
Length = 388
Score = 53 bits (126), Expect = 1e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 12 SDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 70
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 71 CAAPERRDTCEHSSEAKAF 89
>sp|Q9R050|SSBP3_RAT Single-stranded DNA-binding protein 3 OS=Rattus norvegicus
GN=Ssbp3 PE=2 SV=1
Length = 361
Score = 53 bits (126), Expect = 1e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 12 SDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 70
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 71 CAAPERRDTCEHSSEAKAF 89
>sp|P81877|SSBP2_HUMAN Single-stranded DNA-binding protein 2 OS=Homo sapiens
GN=SSBP2 PE=1 SV=2
Length = 361
Score = 53 bits (125), Expect = 2e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 14 SDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 72
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 73 CAAPERRETCEHSSEAKAF 91
>sp|Q9CYZ8|SSBP2_MOUSE Single-stranded DNA-binding protein 2 OS=Mus musculus
GN=Ssbp2 PE=2 SV=1
Length = 361
Score = 53 bits (125), Expect = 2e-006
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 14 SDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 72
Query: 364 IA----RTNEKHSESAAAY 408
A R +HS A A+
Sbjct: 73 CAAPERRETCEHSSEAKAF 91
>sp|Q9BWG4|SSBP4_HUMAN Single-stranded DNA-binding protein 4 OS=Homo sapiens
GN=SSBP4 PE=1 SV=1
Length = 385
Score = 52 bits (122), Expect = 4e-006
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 184 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIF 363
S+ +A + L +Y+Y+YL+ +A++F++E + + + + P GFL WW VFWD++
Sbjct: 13 SDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLY 71
Query: 364 IARTNEK----HSESAAAY 408
A + + HS A A+
Sbjct: 72 CAAPDRREACEHSGEAKAF 90
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,048,610,154
Number of Sequences: 518415
Number of Extensions: 208048610154
Number of Successful Extensions: 1281187403
Number of sequences better than 0.0: 0
|
