BLASTX 7.6.2
Query= UN57841 /QuerySize=716
(715 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G16260.1 | Symbols: | RNA recognition motif (... 312 1e-085
>TAIR9_protein||AT5G16260.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:5311363-5315496 FORWARD
Length = 520
Score = 312 bits (799), Expect = 1e-085
Identities = 158/222 (71%), Positives = 181/222 (81%), Gaps = 16/222 (7%)
Frame = +1
Query: 46 MSGSDNPQAPQSSKD----ASEVGWYILGGNQESLGPYTFLELCDHFKNGYLQETTLVWA 213
MS SDN Q P SS A++VGWYILG NQ++LGPYTF ELC+HF+NGYL ETTLVWA
Sbjct: 1 MSDSDNLQLPPSSTGATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWA 60
Query: 214 EGRSEWQPLSAITELMSRISGAEVDNSAGGASGLVNGYNATTNQEKQ-----ASTEDEFE 378
+GRSEWQPLSAI +LMSRISGAE+ A G+SGL+NG NA T QEKQ ASTEDEFE
Sbjct: 61 DGRSEWQPLSAIPDLMSRISGAEIAYPAVGSSGLINGSNAGTRQEKQDYTASASTEDEFE 120
Query: 379 KWQKEIQEAEAEAERLKNGA------VEDDQDRPSSPPEGEDEFTDDDGTRYKWDKALRA 540
KWQ+EI++AEAEAERLKNG+ VEDD +R SSPPEGEDEFTDDDGT+YKWD+A R
Sbjct: 121 KWQREIKDAEAEAERLKNGSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRV 180
Query: 541 WAPQNEPQ-GSADPYGLEEMTFAEEDEVIPTISILDTSVDKR 663
W PQ++P GS DPYGLEEMTFA+EDEV PTI+ILDTSVDK+
Sbjct: 181 WVPQDDPPLGSVDPYGLEEMTFAKEDEVFPTINILDTSVDKK 222
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,638,555,959
Number of Sequences: 33410
Number of Extensions: 26638555959
Number of Successful Extensions: 862387302
Number of sequences better than 0.0: 0
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