BLASTX 7.6.2
Query= UN57944 /QuerySize=719
(718 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1 67 8e-011
sp|P40561|SGN1_YEAST RNA-binding protein SGN1 OS=Saccharomyces c... 54 9e-007
sp|Q62504|MINT_MOUSE Msx2-interacting protein OS=Mus musculus GN... 51 6e-006
>sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1
Length = 694
Score = 67 bits (163), Expect = 8e-011
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Frame = +3
Query: 81 TLFVGHL----PFQFEKSDLKNFF-KEVGEIVDVRL--AKGFAHVEFASEEAAHKALELN 239
+LFV +L ++ ++ +K FF K+ ++ +VR+ +K F +V+F S E KAL+LN
Sbjct: 282 SLFVKNLTPTKDYEELRTAIKEFFGKKNLQVSEVRIGSSKRFGYVDFLSAEDMDKALQLN 341
Query: 240 GKPLLGRNILLDFAKARPTPRPGNK---VKTIFVTGFNKSVSEDDMKTSLRNHFGACGEI 410
GK L+G I L+ AK++ + + K +T+FV V+ED+MK N E+
Sbjct: 342 GKKLMGLEIKLEKAKSKESLKENKKERDARTLFVKNLPYRVTEDEMKNVFENAL----EV 397
Query: 411 KRISLPYYQETGDSKGVAYLDL-SEDGFIKAL-ELNGSSLGGRNIVVIEARPKEKNADGN 584
+ + + G SKG+AY++ +E KAL E G+ + GR +V+ K +
Sbjct: 398 RLV----LNKEGSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQK 453
Query: 585 SG 590
G
Sbjct: 454 GG 455
>sp|P40561|SGN1_YEAST RNA-binding protein SGN1 OS=Saccharomyces cerevisiae
GN=SGN1 PE=1 SV=1
Length = 250
Score = 54 bits (128), Expect = 9e-007
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 339 FNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSEDGF-IKALELNG 515
F +++ D + +HF CG+IKRI+L Y + TG KG Y++ + KAL+LNG
Sbjct: 67 FVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNG 126
Query: 516 SSLGGRNIVVIEAR 557
L G+ I V R
Sbjct: 127 GELKGKKIAVSRKR 140
>sp|Q62504|MINT_MOUSE Msx2-interacting protein OS=Mus musculus GN=Spen PE=1
SV=2
Length = 3644
Score = 51 bits (121), Expect = 6e-006
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Frame = +3
Query: 69 KEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLAK-----GFAHVEFASEEAAHKALE 233
K +TLF+G+L DL+N F+ GEIVD+ + K +A +++ + KA++
Sbjct: 436 KATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIK 495
Query: 234 LNGKPLLGRNIL-LDFAKARPTPRPGNKVKTIFVTGFNKSVSEDDMKTSLRNHFGACGEI 410
LG N L L F K+ PT +++ G + +VS+ L HF G +
Sbjct: 496 KMDGEYLGNNRLKLGFGKSMPT-------NCVWLDGLSSNVSDQ----YLTRHFCRYGPV 544
Query: 411 KRISLPYYQETGDSKGVAYLDLS--EDGFIKALELNGSSLGGRNIVV 545
++ KG+A + S ED E G +GG I V
Sbjct: 545 VKVVFDRL------KGMALVLYSEIEDAQAAVKETKGRKIGGNKIKV 585
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,048,610,154
Number of Sequences: 518415
Number of Extensions: 208048610154
Number of Successful Extensions: 1281187403
Number of sequences better than 0.0: 0
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