BLASTX 7.6.2
Query= UN57944 /QuerySize=719
(718 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 194 7e-050
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 107 1e-023
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 69 2e-012
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 66 2e-011
TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding p... 60 9e-010
TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic a... 57 8e-009
TAIR9_protein||AT3G48840.1 | Symbols: | nucleic acid binding / ... 55 5e-008
TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular... 54 1e-007
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 194 bits (491), Expect = 7e-050
Identities = 107/227 (47%), Positives = 149/227 (65%), Gaps = 28/227 (12%)
Frame = +3
Query: 36 EMVESDQKSVAKEP-----------KTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-- 176
EMV+++QKS AK+P KTLF G+L +Q +SD++NFFKE GE+VDVRL+
Sbjct: 359 EMVDAEQKSNAKQPKTPTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSF 418
Query: 177 -----KGFAHVEFASEEAAHKALELNGKPLLGRNILLDFAKARPTPR--------PGNKV 317
KG+ H+EFAS E A KALE+NGK LLGR++ LD A R TPR G++
Sbjct: 419 DDGSFKGYGHIEFASPEEAQKALEMNGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQS 478
Query: 318 KTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSEDGFIK 497
+TI+V GF+ S+ ED++K LR+HF CGE+ R+ +P +ETG S+G AY+DL+ GF +
Sbjct: 479 RTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLT-SGFDE 537
Query: 498 ALELNGSSLGGRNIVVIEARPKEKNADGNSGRGNDDTSKRGPEHGDR 638
AL+L+GS +GG NI V E+RP++ + +S R + RG H DR
Sbjct: 538 ALQLSGSEIGGGNIHVEESRPRDSDEGRSSNRAPARGAPRG-RHSDR 583
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 107 bits (265), Expect = 1e-023
Identities = 61/125 (48%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Frame = +3
Query: 306 GNKVKTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSED 485
G K IFV GF+ S+SEDD+K +LR HF +CGEIK +S+P ++TG+SKG+AYL+ SE
Sbjct: 397 GGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSE- 455
Query: 486 GFIKALELNGSSLGGR-NIVVIEARPK-EKNADGNSGRGNDDTSKRGPEHGDRDSLKRGP 659
G KALELNGS +GG +VV E RP+ + + G GRGN G D + G
Sbjct: 456 GKEKALELNGSDMGGGFYLVVDEPRPRGDSSGGGGFGRGNGRFGSGGGRGRDGGRGRFGS 515
Query: 660 GRGNG 674
G G G
Sbjct: 516 GGGRG 520
Score = 54 bits (127), Expect = 1e-007
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +3
Query: 177 KGFAHVEFASEEAAHKALELNGKPLLGRNILLDFAKAR 290
+GF HVEFAS E A KALE +G+PLLGR I LD A+ R
Sbjct: 338 RGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQER 375
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 69 bits (168), Expect = 2e-012
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Frame = +3
Query: 126 LKNFFKEVGEIVDV--------RLAKGFAHVEFASEEAAHKALELNGKPLLGRNILLDFA 281
L F GEI + ++ K + + E A KAL+L+G + G +++
Sbjct: 44 LTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGGWTVIV--- 100
Query: 282 KARPTPRPGNKVKTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGV 461
K +P P + + TI V G++ S+ + ++ L HF +CGEI+ + +P E G K V
Sbjct: 101 KPKPKHEPPSPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSV 160
Query: 462 AYLDLSEDGF-IKALELNGSSLGGRNIVVIEARPKEKNADGNSGRGNDDTSKRGPEH 629
A+L + +G KAL+L+G+ + G ++V +P E D NS R T + H
Sbjct: 161 AFLRIEGEGAEDKALQLSGTDVVGWTVIV---KPSEIFYD-NSSRAPATTPEASKIH 213
Score = 59 bits (140), Expect = 3e-009
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Frame = +3
Query: 177 KGFAHVEFASEEAAHKALELNGKPLLGRNILL--------DFAKARPTPRPGNKVKTIFV 332
K A + E A KAL+L+G ++G +++ + ++A T +K+ V
Sbjct: 158 KSVAFLRIEGEGAEDKALQLSGTDVVGWTVIVKPSEIFYDNSSRAPATTPEASKIHRFRV 217
Query: 333 TGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSEDGFI-KALEL 509
TG++ S+ E D++ +L HF +CGEI ++++ A++ L + + KALEL
Sbjct: 218 TGYDASLPEIDIQMALCKHFSSCGEIWQVTV--------LSSTAFVSLRGERCVDKALEL 269
Query: 510 NGSSLGGRNIVVIE 551
+G ++G R +VV E
Sbjct: 270 SGCNMGERTLVVNE 283
Score = 49 bits (115), Expect = 3e-006
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +3
Query: 324 IFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSEDGF-IKA 500
I V G++ S+ E ++ +L HF +CGEI +I +P + K V+++ + +G KA
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 501 LELNGSSLGGRNIVVIEARPKEKN 572
L+L+G+ +GG ++V +PK K+
Sbjct: 86 LQLSGTDVGGWTVIV---KPKPKH 106
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 66 bits (159), Expect = 2e-011
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = +3
Query: 318 KTIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYLDLSEDGFIK 497
++ VTGF+ S+ DD+K++L +F + GEI R+ +P TG S G AY+DL E G K
Sbjct: 234 RSFSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYAYIDLKE-GAEK 292
Query: 498 ALELNGSSLGGRNIVVIEARPKEKNAD-------GNSGR 593
ALEL +GG ++VV +A P + GN GR
Sbjct: 293 ALELGRHDVGGWDLVVGKAEPIRSGSTWPFPGRCGNQGR 331
>TAIR9_protein||AT1G45100.1 | Symbols: | polyadenylate-binding protein,
putative / PABP, putative | chr1:17050631-17052189 FORWARD
Length = 498
Score = 60 bits (145), Expect = 9e-010
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Frame = +3
Query: 78 KTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAHVEFASEEAAHKALEL 236
KTLFV +L + SD+ NFFK+VGE+V VRL G+ VEFAS A KAL
Sbjct: 247 KTLFVANLRDSIQISDIINFFKDVGEVVHVRLIVNSQGKHAGWGFVEFASANEAEKALVK 306
Query: 237 NGKPLLGRNILLDFAKARPTPRP 305
NG+ L I LD AK P P
Sbjct: 307 NGEYLHNYKISLDGAKTAPHRPP 329
>TAIR9_protein||AT5G41690.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr5:16670126-16674189 REVERSE
Length = 568
Score = 57 bits (137), Expect = 8e-009
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 57 KSVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAHVEFASEEA 215
++V KTLFV HL + E + + NFFK+VGE+V VRL G A VEF S
Sbjct: 301 EAVGVRKKTLFVAHLSRKTEITHIINFFKDVGEVVHVRLILNHTGKHVGCAFVEFGSANE 360
Query: 216 AHKALEL-NGKPLLGRNILLDFAKARPTPRP 305
A ALE NG+ L I L+ AK P P P
Sbjct: 361 AKMALETKNGEYLNDCKIFLEVAKMVPYPPP 391
Score = 54 bits (127), Expect = 1e-007
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Frame = +3
Query: 57 KSVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRL-------AKGFAHVEFASEEA 215
K A KTLFV +LP++ + ++ +FFK+VGE+V V+L G VEFAS
Sbjct: 61 KEAAVREKTLFVANLPYETKIPNIIDFFKKVGEVVRVQLIVNLKGKLVGCGFVEFASVNE 120
Query: 216 AHKALE-LNGKPLLGRNILLDFAKARPTPRP 305
A +AL+ NG+ L I LD A + T P
Sbjct: 121 AEEALQKKNGECLDNNKIFLDVANKKATYLP 151
>TAIR9_protein||AT3G48840.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr3:18112721-18114070 REVERSE
Length = 190
Score = 55 bits (130), Expect = 5e-008
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Frame = +3
Query: 36 EMVESDQ-KSVAKEPKTLFVGHLPFQFEKSDLKNFFKEVGEIVDVRLA-------KGFAH 191
E +SD + VA KTLF+ +LP + E + NFF++VGE+V VRL G
Sbjct: 25 ETPDSDYLEEVAVRKKTLFIANLPLKSEMPHIINFFRDVGEVVSVRLIVDHRGKHVGCGF 84
Query: 192 VEFASEEAAHKA--LELNGKPLLGRNILLDFAKARPTP 299
VEFAS A KA + N + L R ++LD A+ P P
Sbjct: 85 VEFASAYKAKKAPLEKKNLRRLRNRYVVLDVAEIAPYP 122
>TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding /
nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins
in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr5:21011418-21013657 FORWARD
Length = 413
Score = 54 bits (127), Expect = 1e-007
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +3
Query: 297 PRPGNKVK--TIFVTGFNKSVSEDDMKTSLRNHFGACGEIKRISLPYYQETGDSKGVAYL 470
P+ G + TIFV G++ S+ E+D+ +L HF CG I RI Y +T D+ G A L
Sbjct: 184 PKQGGRYDCGTIFVKGYDSSLGENDLARALLEHFSPCGMISRI----YFQTNDA-GEAVL 238
Query: 471 D----LSEDGFIKALELNGSSLGGRNIVVIEARPKEK 569
+ G AL+LNGS +GG N+ V +A +++
Sbjct: 239 KHVFIVMLQGTEDALKLNGSDMGGCNLEVHDATERDE 275
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,638,555,959
Number of Sequences: 33410
Number of Extensions: 26638555959
Number of Successful Extensions: 862387302
Number of sequences better than 0.0: 0
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