BLASTX 7.6.2
Query= UN57991 /QuerySize=609
(608 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 158 4e-039
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 158 4e-039
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 151 5e-037
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 95 3e-020
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 93 1e-019
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 88 3e-018
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 87 7e-018
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 87 9e-018
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 71 4e-013
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 65 2e-011
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 62 2e-010
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 60 1e-009
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 60 1e-009
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 59 2e-009
TAIR9_protein||AT2G11910.1 | Symbols: | unknown protein | chr2:... 55 2e-008
TAIR9_protein||AT2G11910.2 | Symbols: | unknown protein | chr2:... 55 2e-008
TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase fami... 55 3e-008
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 54 6e-008
TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant ... 53 1e-007
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 158 bits (397), Expect = 4e-039
Identities = 73/101 (72%), Positives = 89/101 (88%)
Frame = +3
Query: 90 MKTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDESENSLS 269
+K GKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDAYNK++EEGSDESE S S
Sbjct: 78 VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRS 137
Query: 270 EVNDEDEASEEEEKVKKGKAGEDDDDDDDEDDDDEDDEDEE 392
E+NDEDEAS EEE ++K AG+D++++++EDDDD+DDE+E+
Sbjct: 138 EINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 158 bits (397), Expect = 4e-039
Identities = 73/101 (72%), Positives = 89/101 (88%)
Frame = +3
Query: 90 MKTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDESENSLS 269
+K GKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDAYNK++EEGSDESE S S
Sbjct: 78 VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRS 137
Query: 270 EVNDEDEASEEEEKVKKGKAGEDDDDDDDEDDDDEDDEDEE 392
E+NDEDEAS EEE ++K AG+D++++++EDDDD+DDE+E+
Sbjct: 138 EINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 151 bits (379), Expect = 5e-037
Identities = 73/108 (67%), Positives = 89/108 (82%), Gaps = 7/108 (6%)
Frame = +3
Query: 90 MKTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDESENSLS 269
+K GKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDAYNK++EEGSDESE S S
Sbjct: 78 VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRS 137
Query: 270 EVNDEDEASEE-------EEKVKKGKAGEDDDDDDDEDDDDEDDEDEE 392
E+NDEDEAS E EE ++K AG+D++++++EDDDD+DDE+E+
Sbjct: 138 EINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDDDDDEEED 185
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 95 bits (234), Expect = 3e-020
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 3/79 (3%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENS 263
K+ GKAGG+KWKS+S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKS 120
Query: 264 LSEVNDEDEASEEEEKVKK 320
+SEVNDED+A + E+V++
Sbjct: 121 VSEVNDEDDAEDGSEEVRR 139
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 93 bits (230), Expect = 1e-019
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENS 263
K+ GKAGG+KWKS+S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKS 120
Query: 264 LSEVNDEDEA---SEEEE 308
+SEVNDED+A SEEEE
Sbjct: 121 VSEVNDEDDAEDGSEEEE 138
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 88 bits (217), Expect = 3e-018
Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENS 263
K+ GKA G KWKS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKS 123
Query: 264 LSEVNDEDEA---SEEEE 308
+SEVNDED+A SEEEE
Sbjct: 124 VSEVNDEDDAEDGSEEEE 141
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 87 bits (214), Expect = 7e-018
Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENS 263
K+ GKA G KWKS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKS 123
Query: 264 LSEVNDEDEA---SEEEE 308
+SEVNDED+A SEEE+
Sbjct: 124 VSEVNDEDDAEDGSEEED 141
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 87 bits (213), Expect = 9e-018
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENS 263
K+ GKA G KWKS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKS 123
Query: 264 LSEVNDEDEASEEEEK 311
+SEVNDED+A + E+
Sbjct: 124 VSEVNDEDDAEDGSEE 139
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 71 bits (173), Expect = 4e-013
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +3
Query: 99 AKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDESENSLSEVN 278
AK K GG+KWKS+++ EK Y +KAA+ KAEY K +++ N + EE DE + S +V+
Sbjct: 142 AKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLES-NDADEEEEDEEKQS-DDVD 199
Query: 279 DEDEASEEEEKVKKGKAGEDDDDDDDEDDDDEDDEDE 389
D +E +++ + K E+ DDD E + E++E+E
Sbjct: 200 DAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEE 236
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 65 bits (158), Expect = 2e-011
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 233
K+ GKAGG+KWKS+S +EKAPY KA KRK EYEK M AYNK +
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 62 bits (149), Expect = 2e-010
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Frame = +3
Query: 195 EYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDDED---- 362
EY K+ D +N EG + + E DED ++E+E + + +DDDDDDD+D
Sbjct: 47 EYIKVYDDHNND-GEGDGDGDGDGDEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADD 105
Query: 363 -DDDEDDEDEEED*TGDRDQSLDLEDN 440
DDDEDD+DE++D D D D E++
Sbjct: 106 ADDDEDDDDEDDDEDEDDDDDDDDEND 132
Score = 55 bits (130), Expect = 4e-008
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +3
Query: 246 DESENSLSEVNDEDEASEEEEKVKKGKAGEDDDD----DDDEDDDDE-DDEDEEED*TGD 410
DE E+ ++ DEDE +E+E +DDDD DDDEDDDDE DDEDE++D D
Sbjct: 70 DEDEDEDADA-DEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDD 128
Query: 411 RDQSLDLEDNYRFRR 455
+ + +D Y R
Sbjct: 129 DENDEECDDEYDSHR 143
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 60 bits (143), Expect = 1e-009
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESEN 260
K+ GKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 261 SLSEVNDEDEASEEEE 308
S SEV DEA EEE
Sbjct: 121 SKSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 60 bits (143), Expect = 1e-009
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESEN 260
K+ GKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 261 SLSEVNDEDEASEEEE 308
S SEV DEA EEE
Sbjct: 121 SKSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 59 bits (141), Expect = 2e-009
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Frame = +3
Query: 93 KTAKGKGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESEN 260
K+ GKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 261 SLSEVNDEDEASEEE 305
S SEV DE EA +++
Sbjct: 121 SKSEV-DEAEAEDDD 134
>TAIR9_protein||AT2G11910.1 | Symbols: | unknown protein | chr2:4805862-4807164
REVERSE
Length = 169
Score = 55 bits (132), Expect = 2e-008
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = +3
Query: 234 EEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDDE----DDDDEDDEDEEED 398
++ +DE + E+EA E++ V G G DD+DDDDE DD+DED+EDEEED
Sbjct: 92 DDANDEDFSGGEGDEGEEEADPEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEEED 150
>TAIR9_protein||AT2G11910.2 | Symbols: | unknown protein | chr2:4805862-4807164
REVERSE
Length = 169
Score = 55 bits (132), Expect = 2e-008
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = +3
Query: 234 EEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDDE----DDDDEDDEDEEED 398
++ +DE + E+EA E++ V G G DD+DDDDE DD+DED+EDEEED
Sbjct: 92 DDANDEDFSGGEGDEGEEEADPEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEEED 150
>TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase family protein |
chr5:4908686-4910670 FORWARD
Length = 491
Score = 55 bits (131), Expect = 3e-008
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 120 GGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASE 299
GG+K ++ +++ K +K NK ++ + S +D+D+ E
Sbjct: 54 GGEKVDGAGSDDEDNDKKEKKKEHDVQKKDKQHENKDKDDEKKHVDKKKSGGHDKDDDDE 113
Query: 300 EEEKVKKGKAGEDDDD-DDDEDDDDEDDEDEEED*TGDRDQS 422
++ K KK DDDD DDD DDDD+DD+D+++D D D +
Sbjct: 114 KKHKDKKKDGHNDDDDSDDDTDDDDDDDDDDDDDDEVDGDDN 155
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 54 bits (128), Expect = 6e-008
Identities = 21/70 (30%), Positives = 48/70 (68%)
Frame = +3
Query: 210 MDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDDEDDDDEDDEDE 389
M+ + + EE +E E E +E+E EEEE+ ++ + E+++++++E++++E++E+E
Sbjct: 1 MEFWGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60
Query: 390 EED*TGDRDQ 419
EE+ DR++
Sbjct: 61 EEEEEEDRER 70
>TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: EMB2758 (embryo defective 2758)
(TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635
species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI
BLink). | chr3:18212187-18217848 REVERSE
Length = 1216
Score = 53 bits (125), Expect = 1e-007
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +3
Query: 204 KLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDDEDDDDEDDE 383
+LM + E DES + SE EDE EE + + + +DDDDDDD++DDD+ D
Sbjct: 916 ELMGLSDSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDS 975
Query: 384 DE 389
DE
Sbjct: 976 DE 977
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,638,555,959
Number of Sequences: 33410
Number of Extensions: 26638555959
Number of Successful Extensions: 862387302
Number of sequences better than 0.0: 0
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