BLASTX 7.6.2
Query= UN58066 /QuerySize=677
(676 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular... 394 2e-110
>TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40
repeat (InterPro:IPR001680), WD40/YVTN repeat-like
(InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336
species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794;
Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI
BLink). | chr5:8459148-8467920 REVERSE
Length = 1378
Score = 394 bits (1012), Expect = 2e-110
Identities = 203/222 (91%), Positives = 213/222 (95%), Gaps = 1/222 (0%)
Frame = +3
Query: 3 FCMVAHPLQPHLVATGTNVGIIVSEFDPRAIPSAAFLPALPGSRENSAVYILGRELKLLN 182
+CMVAHPLQPHLVATGTNVGIIVSEFDPRAIPSAA LPALPGSRENSA+YILGRELKLLN
Sbjct: 373 YCMVAHPLQPHLVATGTNVGIIVSEFDPRAIPSAAPLPALPGSRENSAIYILGRELKLLN 432
Query: 183 FQISNSANPSLGNN-ALSESGMSKLDAGEQMTVKQTKKQSVASVPHDSYSVLSVSSSGKY 359
FQ+SN+ANPSLGNN ALSESG+SK D GEQ+TVKQTKKQ VA VPHDSYSVLSVSSSGKY
Sbjct: 433 FQLSNTANPSLGNNSALSESGLSKGDPGEQLTVKQTKKQIVAPVPHDSYSVLSVSSSGKY 492
Query: 360 VAVVWPDILYFSIYKVSDWSVVDSGSARILVWDTCRDRFAILESVLPQRMPMIPKGGSSR 539
VAVVWPDILYFSIYKVSDWS+VDSGSAR+L WDTCRDRFAILESVLP RMP+IPKGGSSR
Sbjct: 493 VAVVWPDILYFSIYKVSDWSIVDSGSARLLAWDTCRDRFAILESVLPHRMPIIPKGGSSR 552
Query: 540 KAKEAAAAAAQAAAAAHASSSASVQVRILLDDGTSNILMRSV 665
KAKEAAAAAAQAAAAA A+SSASVQVRILLDDGTSNILMRSV
Sbjct: 553 KAKEAAAAAAQAAAAASAASSASVQVRILLDDGTSNILMRSV 594
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,727,740,123
Number of Sequences: 33410
Number of Extensions: 26727740123
Number of Successful Extensions: 867613076
Number of sequences better than 0.0: 0
|