BLASTX 7.6.2
Query= UN58270 /QuerySize=744
(743 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|3063701|emb|CAA18592.1| putative protein [Arabidopsis thaliana] 275 6e-072
gi|145334203|ref|NP_001078482.1| DNA polymerase theta subunit [A... 270 2e-070
gi|297802740|ref|XP_002869254.1| predicted protein [Arabidopsis ... 263 3e-068
gi|225430047|ref|XP_002281624.1| PREDICTED: hypothetical protein... 108 1e-021
gi|296081899|emb|CBI20904.3| unnamed protein product [Vitis vini... 108 1e-021
gi|255551068|ref|XP_002516582.1| DNA polymerase theta, putative ... 105 1e-020
>gi|3063701|emb|CAA18592.1| putative protein [Arabidopsis thaliana]
Length = 671
Score = 275 bits (702), Expect = 6e-072
Identities = 157/211 (74%), Positives = 167/211 (79%), Gaps = 17/211 (8%)
Frame = +3
Query: 132 RSPAVILLLLLLLHPSMDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPG 311
RSPAV L P MDSDSS+SRIDQFYVSKKRKH SPNLKSGRNEKNVKVTGERSPG
Sbjct: 138 RSPAV-----TLFPPLMDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPG 192
Query: 312 DKGTLDNYLKPSLDDKSTSNSVLQARQEAFTKKLDLEVS-------IHPRLPKPVSSESS 470
DKGTLD+YLK SLDDKST+NS LQARQEAFT+KLDLEVS IHP LPKPVS +
Sbjct: 193 DKGTLDSYLKASLDDKSTTNSGLQARQEAFTRKLDLEVSASSVGQNIHPCLPKPVSFATF 252
Query: 471 RGAEGCLNLGGKSQVLTKEGVATAESHAPDVFLCANQKDNSELRDFATGFLSLYCSEVRS 650
+ CL G SQ L KEGVA AE+HA D LCANQKDNSELRDFAT FLSLYCS V+S
Sbjct: 253 K---ECLGQNG-SQDLHKEGVA-AETHATDGLLCANQKDNSELRDFATSFLSLYCSGVQS 307
Query: 651 VVGSLPHQKANELKRCGSSSLLAQDMQVSHK 743
VVGS PHQK NELKR SSS LAQD+Q+SHK
Sbjct: 308 VVGSPPHQKENELKRRSSSSSLAQDIQISHK 338
>gi|145334203|ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis
thaliana]
Length = 2154
Score = 270 bits (688), Expect = 2e-070
Identities = 150/195 (76%), Positives = 160/195 (82%), Gaps = 12/195 (6%)
Frame = +3
Query: 180 MDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKPSLDDK 359
MDSDSS+SRIDQFYVSKKRKH SPNLKSGRNEKNVKVTGERSPGDKGTLD+YLK SLDDK
Sbjct: 1 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDSYLKASLDDK 60
Query: 360 STSNSVLQARQEAFTKKLDLEVS-------IHPRLPKPVSSESSRGAEGCLNLGGKSQVL 518
ST+NS LQARQEAFT+KLDLEVS IHP LPKPVS + + CL G SQ L
Sbjct: 61 STTNSGLQARQEAFTRKLDLEVSASSVGQNIHPCLPKPVSFATFK---ECLGQNG-SQDL 116
Query: 519 TKEGVATAESHAPDVFLCANQKDNSELRDFATGFLSLYCSEVRSVVGSLPHQKANELKRC 698
KEGVA AE+HA D LCANQKDNSELRDFAT FLSLYCS V+SVVGS PHQK NELKR
Sbjct: 117 HKEGVA-AETHATDGLLCANQKDNSELRDFATSFLSLYCSGVQSVVGSPPHQKENELKRR 175
Query: 699 GSSSLLAQDMQVSHK 743
SSS LAQD+Q+SHK
Sbjct: 176 SSSSSLAQDIQISHK 190
>gi|297802740|ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 2147
Score = 263 bits (670), Expect = 3e-068
Identities = 147/195 (75%), Positives = 160/195 (82%), Gaps = 12/195 (6%)
Frame = +3
Query: 180 MDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKPSLDDK 359
MDSDSS+SRIDQFYVSKKRKH SPNLKSGRNEKNVKVTGERSPGDKGTLDNYLK SLDDK
Sbjct: 1 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKASLDDK 60
Query: 360 STSNSVLQARQEAFTKKLDLEVS-------IHPRLPKPVSSESSRGAEGCLNLGGKSQVL 518
ST+NS LQARQEAFT+KLDLEVS I+P LPKPV+ + + CL+ G S+ L
Sbjct: 61 STTNSGLQARQEAFTRKLDLEVSASSVGENINPCLPKPVTIATFK---ECLDQNG-SRDL 116
Query: 519 TKEGVATAESHAPDVFLCANQKDNSELRDFATGFLSLYCSEVRSVVGSLPHQKANELKRC 698
KEGVA AE+HA D CANQKDNSELRDFAT FLSLYCS ++SVVGS PHQKANELKR
Sbjct: 117 HKEGVA-AEAHATDGLHCANQKDNSELRDFATSFLSLYCSGLQSVVGSPPHQKANELKRR 175
Query: 699 GSSSLLAQDMQVSHK 743
SSS LAQD+Q SHK
Sbjct: 176 SSSSSLAQDIQSSHK 190
>gi|225430047|ref|XP_002281624.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 2100
Score = 108 bits (268), Expect = 1e-021
Identities = 76/193 (39%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +3
Query: 180 MDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKPSLDDK 359
M SDS R+RIDQF+ SKKRK LSP LK+GR EK+ K + SP KGTLDNYL DD
Sbjct: 1 MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60
Query: 360 STSNSVLQARQEAFTKKLDLEVSIHPRLPKPVSSESSRGAEGCLNLGGK-----SQVLTK 524
ST+ A + + L LE+++ + + S + G G+ S+ L++
Sbjct: 61 STARG-SSAGKGPVKRNLTLEINLPSKDENENALLSGQLGHGTTEAFGETHTENSRGLSQ 119
Query: 525 EGVATAESHAPDVFLCANQKDNSELRDFATGFLSLYCSEVRSVVGSLPHQKANELKRCGS 704
G D + A+ NSEL+ A FLSLYCSE S K N KRCGS
Sbjct: 120 MGGVGVGEQLKDCSVSAHGPVNSELKQIAADFLSLYCSEFPSSASLPSGLKVNVNKRCGS 179
Query: 705 SSLLAQDMQVSHK 743
SL ++S K
Sbjct: 180 PSLQDVKNEISKK 192
>gi|296081899|emb|CBI20904.3| unnamed protein product [Vitis vinifera]
Length = 2091
Score = 108 bits (268), Expect = 1e-021
Identities = 76/193 (39%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +3
Query: 180 MDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKPSLDDK 359
M SDS R+RIDQF+ SKKRK LSP LK+GR EK+ K + SP KGTLDNYL DD
Sbjct: 1 MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60
Query: 360 STSNSVLQARQEAFTKKLDLEVSIHPRLPKPVSSESSRGAEGCLNLGGK-----SQVLTK 524
ST+ A + + L LE+++ + + S + G G+ S+ L++
Sbjct: 61 STARG-SSAGKGPVKRNLTLEINLPSKDENENALLSGQLGHGTTEAFGETHTENSRGLSQ 119
Query: 525 EGVATAESHAPDVFLCANQKDNSELRDFATGFLSLYCSEVRSVVGSLPHQKANELKRCGS 704
G D + A+ NSEL+ A FLSLYCSE S K N KRCGS
Sbjct: 120 MGGVGVGEQLKDCSVSAHGPVNSELKQIAADFLSLYCSEFPSSASLPSGLKVNVNKRCGS 179
Query: 705 SSLLAQDMQVSHK 743
SL ++S K
Sbjct: 180 PSLQDVKNEISKK 192
>gi|255551068|ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus
communis]
Length = 2154
Score = 105 bits (260), Expect = 1e-020
Identities = 78/196 (39%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Frame = +3
Query: 180 MDSDSSRSRIDQFYVSKKRKHLSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKPSLDDK 359
M+SDSSR RI+QF+ SKKRK LSP LK G EK +T + SP KGTLDNYL S D
Sbjct: 1 MESDSSRIRINQFFASKKRKALSPGLKYG-IEKEATITSDGSPNAKGTLDNYLVNSQD-- 57
Query: 360 STSNSVLQARQEAFTKKLDLEVS-------IHPRLPKPVSSESSRGAEGCLNLGGKSQVL 518
N L +RQ++ + L LE++ + P + S++S GA G +
Sbjct: 58 --QNRGLLSRQDSVKRNLALEINELSKDEKMDPCSVAKLDSQNSEGA-------GTIKKE 108
Query: 519 TKEGVATAESHAPDVFLCANQK-DNSELRDFATGFLSLYCSEVRSVVGSLPHQKANELKR 695
T +G A A + Q ++SEL+ FA FLSLYCSE++S S K N+ KR
Sbjct: 109 TSQGSCNAGHVAVEGCSVPRQSAESSELKQFANDFLSLYCSELQSTATSPSKPKLNDHKR 168
Query: 696 CGSSSLLAQDMQVSHK 743
GS L+ + S K
Sbjct: 169 HGSPLLVDDRDKTSKK 184
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,993,367,703,379
Number of Sequences: 15229318
Number of Extensions: 5993367703379
Number of Successful Extensions: 1421579614
Number of sequences better than 0.0: 0
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