BLASTX 7.6.2
Query= UN58273 /QuerySize=716
(715 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13230.1 | Symbols: | RNA binding | chr3:4270... 319 2e-087
>TAIR9_protein||AT3G13230.1 | Symbols: | RNA binding | chr3:4270423-4271070
FORWARD
Length = 216
Score = 319 bits (815), Expect = 2e-087
Identities = 164/204 (80%), Positives = 178/204 (87%), Gaps = 2/204 (0%)
Frame = +2
Query: 104 NTQMEVEIATTEAAAPLPAKPIFKPLKAHEMSDGKVQFRKIPVPPNRYTPLKKAWLDIYT 283
+TQMEVE A TE PLP KP FKPLKAHEMSDGKVQFRKI VPPNRY+PLKKAWLDIYT
Sbjct: 4 STQMEVETA-TEGTVPLPPKPTFKPLKAHEMSDGKVQFRKIAVPPNRYSPLKKAWLDIYT 62
Query: 284 PVYDQMKVDIRMNLKSRKVELKTRADTPDVSNLQKSADFVHAFMLGFDIPDAVALLRMDE 463
P+YDQMKVDIRMNLK+RKVELKTRADTPD+SNLQKSADFVHAFMLGFDIPDA++LLRMDE
Sbjct: 63 PIYDQMKVDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDIPDAISLLRMDE 122
Query: 464 LYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKTRFAIENSTKTRIVIADTRF-IYWVLLL 640
LYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKT+FAIENSTKTRIVIADTR I
Sbjct: 123 LYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTRIHILGAFSN 182
Query: 641 ILRLRGALFAVLLWVPCWQVYSSL 712
I R +L ++++ P +VYS L
Sbjct: 183 IKVARSSLCSLIMGSPAGKVYSKL 206
Score = 48 bits (113), Expect = 5e-006
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1
Query: 616 IHILGAFTNIKVARSSLCSLIMGS 687
IHILGAF+NIKVARSSLCSLIMGS
Sbjct: 174 IHILGAFSNIKVARSSLCSLIMGS 197
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,807,724,921
Number of Sequences: 33410
Number of Extensions: 26807724921
Number of Successful Extensions: 872894636
Number of sequences better than 0.0: 0
|