BLASTX 7.6.2
Query= UN58478 /QuerySize=833
(832 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 262 3e-070
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 257 1e-068
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 58 7e-009
TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY O... 49 3e-006
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 262 bits (668), Expect = 3e-070
Identities = 142/170 (83%), Positives = 143/170 (84%), Gaps = 16/170 (9%)
Frame = -3
Query: 797 TYMGGGGGSTSGNNTLSGPFG----NWGAPGGGGGNNAVVGSNENVKFGYGGNGESGFGL 630
TYM GGS+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGL
Sbjct: 338 TYM---GGSSSGNNTLSGPFGNSGVNWGAP--GGGNNAV--SNENVKFGYGGNGESGFGL 390
Query: 629 GTGGYAARNIGPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSP 450
GTGGYAARN P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSP
Sbjct: 391 GTGGYAARN---PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSP 445
Query: 449 TPETEGPASFSYGIGGGGPSSDVSGRSSSPGYVGSYSVNKRQPNRGIAT* 300
TPETEGPA FSYGIGGG PSSDVS RSSSPGYVGSYSVNKRQPNRGIAT*
Sbjct: 446 TPETEGPAPFSYGIGGGVPSSDVSARSSSPGYVGSYSVNKRQPNRGIAT* 495
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 257 bits (654), Expect = 1e-068
Identities = 139/166 (83%), Positives = 140/166 (84%), Gaps = 16/166 (9%)
Frame = -3
Query: 797 TYMGGGGGSTSGNNTLSGPFG----NWGAPGGGGGNNAVVGSNENVKFGYGGNGESGFGL 630
TYM GGS+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGL
Sbjct: 338 TYM---GGSSSGNNTLSGPFGNSGVNWGAP--GGGNNAV--SNENVKFGYGGNGESGFGL 390
Query: 629 GTGGYAARNIGPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSP 450
GTGGYAARN P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSP
Sbjct: 391 GTGGYAARN---PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSP 445
Query: 449 TPETEGPASFSYGIGGGGPSSDVSGRSSSPGYVGSYSVNKRQPNRG 312
TPETEGPA FSYGIGGG PSSDVS RSSSPGYVGSYSVNKRQPNRG
Sbjct: 446 TPETEGPAPFSYGIGGGVPSSDVSARSSSPGYVGSYSVNKRQPNRG 491
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 58 bits (138), Expect = 7e-009
Identities = 50/174 (28%), Positives = 60/174 (34%), Gaps = 23/174 (13%)
Frame = -3
Query: 788 GGGGGSTSGNNTLSGPFGNWGAPGGGGGNNAVVGSNENVKFGYGGNGESGF-GLGTGGYA 612
GGGGG G+ G G +G GG GG G N GYGGN G+ G G GGY
Sbjct: 131 GGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSG--GGYGGNAAGGYGGSGAGGYG 188
Query: 611 ARNIGPPSKAAAAPSSSSF------------SSASAANNNIGYDGAGLAEFYG--NGAVY 474
G SS F +SA A + G G G A YG NG
Sbjct: 189 GDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVGDYNGSSGYGSANTYGSSNGGFA 248
Query: 473 SDPTWRSPTPETEGPASFSYGIGGGGPSSDVSGRSSSPGYVGSYSVNKRQPNRG 312
D + P S GG G+ GS ++ + G
Sbjct: 249 GDSQFGG------SPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETKMEDG 296
>TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY ORGANIZED
TRIBUTARIES 1) | chr2:15165468-15166235 FORWARD
Length = 256
Score = 49 bits (116), Expect = 3e-006
Identities = 45/157 (28%), Positives = 54/157 (34%), Gaps = 12/157 (7%)
Frame = -3
Query: 788 GGGGGSTSGNNTLSGPFGNWGAPGGGGGNNAVVGSNENVKFGYGGNGESGFGLGTGGYAA 609
GGGGG G G G G GGG G G G+GG G G G G GG
Sbjct: 82 GGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGAGGGGGGGGG 141
Query: 608 RNIGPPSKAAAAPSSSSFSSASAANN-------NIGYDGAGLAEFYGNGAVYSDPTWRSP 450
+ G A + + A + N G G G E +G Y
Sbjct: 142 AHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGA---GGG 198
Query: 449 TPETEGPASFSYGIGGGGPSSDVSGRSSSPGYVGSYS 339
E G + + G GGGG SG G G Y+
Sbjct: 199 AGEGYGGGAGAGGHGGGGGGGGGSGGGGGGG--GGYA 233
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,807,724,921
Number of Sequences: 33410
Number of Extensions: 26807724921
Number of Successful Extensions: 872894636
Number of sequences better than 0.0: 0
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