Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN58580


BLASTX 7.6.2

Query= UN58580 /QuerySize=793
        (792 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|312282863|dbj|BAJ34297.1| unnamed protein product [Thellungie...    199   6e-049
gi|15220971|ref|NP_175794.1| ethylene-responsive transcription f...    198   1e-048
gi|21593779|gb|AAM65746.1| AP2 domain containing protein, putati...    198   1e-048
gi|2281649|gb|AAC49778.1| AP2 domain containing protein RAP2.12 ...    198   1e-048
gi|145325427|ref|NP_001077718.1| ethylene-responsive transcripti...    198   1e-048
gi|297847798|ref|XP_002891780.1| hypothetical protein ARALYDRAFT...    185   7e-045

>gi|312282863|dbj|BAJ34297.1| unnamed protein product [Thellungiella halophila]

          Length = 359

 Score =  199 bits (504), Expect = 6e-049
 Identities = 111/164 (67%), Positives = 125/164 (76%), Gaps = 24/164 (14%)
 Frame = -3

Query: 718 SHKPVAKP--NPNPASFQN----FDNMCFMEDTQQGNNNNN---NNSFGAGGGNGYHQYF 566
           S KPVAKP  NP+PA  QN    FDNMCF+E+  Q N+NN     N+    GGNGYHQYF
Sbjct: 197 SQKPVAKPNSNPSPALVQNFDNSFDNMCFVEEKHQVNSNNQFGLKNTIDV-GGNGYHQYF 255

Query: 565 SSDQGSNS-----FGWSDQAPITPEISSAFI---NNNNSALFVEDA--SKKLKSMDFETP 416
           SSDQGSNS     FGWS QAPITPEISSAFI   NNNNSA+FVE+A  +KKLKSMDFETP
Sbjct: 256 SSDQGSNSFDCSEFGWSGQAPITPEISSAFINNNNNNNSAVFVEEANPAKKLKSMDFETP 315

Query: 415 ----EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
               EW+SSLDFL+GD V T++NG NPM+LWSIDEI+SMIGGVF
Sbjct: 316 YNNTEWESSLDFLNGDGVATQDNGLNPMDLWSIDEIDSMIGGVF 359

>gi|15220971|ref|NP_175794.1| ethylene-responsive transcription factor RAP2-12
        [Arabidopsis thaliana]

          Length = 358

 Score =  198 bits (501), Expect = 1e-048
 Identities = 113/161 (70%), Positives = 124/161 (77%), Gaps = 24/161 (14%)
 Frame = -3

Query: 712 KPVAKPNPN--PASFQN----FDNMCFMEDTQQGNNNNNN-----NSFGAGGGNGYHQYF 566
           KPVAKPNPN  PA  QN    F+NMCFME+  Q +NNNNN     NS  A G NGY QYF
Sbjct: 200 KPVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDA-GCNGY-QYF 257

Query: 565 SSDQGSNS-----FGWSDQAPITPEISSAFINNNNSALFVEDA--SKKLKSMDFETP--- 416
           SSDQGSNS     FGWSDQAPITP+ISSA INNNNSALF E+A  +KKLKSMDFETP   
Sbjct: 258 SSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEANPAKKLKSMDFETPYNN 317

Query: 415 -EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
            EWD+SLDFL+ DAV T++NGANPM+LWSIDEI SMIGGVF
Sbjct: 318 TEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358

>gi|21593779|gb|AAM65746.1| AP2 domain containing protein, putative [Arabidopsis
        thaliana]

          Length = 358

 Score =  198 bits (501), Expect = 1e-048
 Identities = 113/161 (70%), Positives = 124/161 (77%), Gaps = 24/161 (14%)
 Frame = -3

Query: 712 KPVAKPNPN--PASFQN----FDNMCFMEDTQQGNNNNNN-----NSFGAGGGNGYHQYF 566
           KPVAKPNPN  PA  QN    F+NMCFME+  Q +NNNNN     NS  A G NGY QYF
Sbjct: 200 KPVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDA-GCNGY-QYF 257

Query: 565 SSDQGSNS-----FGWSDQAPITPEISSAFINNNNSALFVEDA--SKKLKSMDFETP--- 416
           SSDQGSNS     FGWSDQAPITP+ISSA INNNNSALF E+A  +KKLKSMDFETP   
Sbjct: 258 SSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEANPAKKLKSMDFETPYNN 317

Query: 415 -EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
            EWD+SLDFL+ DAV T++NGANPM+LWSIDEI SMIGGVF
Sbjct: 318 TEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358

>gi|2281649|gb|AAC49778.1| AP2 domain containing protein RAP2.12 [Arabidopsis
        thaliana]

          Length = 317

 Score =  198 bits (501), Expect = 1e-048
 Identities = 113/161 (70%), Positives = 124/161 (77%), Gaps = 24/161 (14%)
 Frame = -3

Query: 712 KPVAKPNPN--PASFQN----FDNMCFMEDTQQGNNNNNN-----NSFGAGGGNGYHQYF 566
           KPVAKPNPN  PA  QN    F+NMCFME+  Q +NNNNN     NS  A G NGY QYF
Sbjct: 159 KPVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDA-GCNGY-QYF 216

Query: 565 SSDQGSNS-----FGWSDQAPITPEISSAFINNNNSALFVEDA--SKKLKSMDFETP--- 416
           SSDQGSNS     FGWSDQAPITP+ISSA INNNNSALF E+A  +KKLKSMDFETP   
Sbjct: 217 SSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEANPAKKLKSMDFETPYNN 276

Query: 415 -EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
            EWD+SLDFL+ DAV T++NGANPM+LWSIDEI SMIGGVF
Sbjct: 277 TEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 317

>gi|145325427|ref|NP_001077718.1| ethylene-responsive transcription factor
        RAP2-12 [Arabidopsis thaliana]

          Length = 356

 Score =  198 bits (501), Expect = 1e-048
 Identities = 113/161 (70%), Positives = 124/161 (77%), Gaps = 24/161 (14%)
 Frame = -3

Query: 712 KPVAKPNPN--PASFQN----FDNMCFMEDTQQGNNNNNN-----NSFGAGGGNGYHQYF 566
           KPVAKPNPN  PA  QN    F+NMCFME+  Q +NNNNN     NS  A G NGY QYF
Sbjct: 198 KPVAKPNPNPSPALVQNSNISFENMCFMEEKHQVSNNNNNQFGMTNSVDA-GCNGY-QYF 255

Query: 565 SSDQGSNS-----FGWSDQAPITPEISSAFINNNNSALFVEDA--SKKLKSMDFETP--- 416
           SSDQGSNS     FGWSDQAPITP+ISSA INNNNSALF E+A  +KKLKSMDFETP   
Sbjct: 256 SSDQGSNSFDCSEFGWSDQAPITPDISSAVINNNNSALFFEEANPAKKLKSMDFETPYNN 315

Query: 415 -EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
            EWD+SLDFL+ DAV T++NGANPM+LWSIDEI SMIGGVF
Sbjct: 316 TEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 356

>gi|297847798|ref|XP_002891780.1| hypothetical protein ARALYDRAFT_892441
        [Arabidopsis lyrata subsp. lyrata]

          Length = 345

 Score =  185 bits (469), Expect = 7e-045
 Identities = 108/177 (61%), Positives = 122/177 (68%), Gaps = 29/177 (16%)
 Frame = -3

Query: 766 RGSKAKVNFPVESLTVSHKPVAKPNPNPASFQN----FDNMCFMEDTQQGNNNNNNNSFG 599
           R  KA +  PV       KP   PNP+PA  QN    FDNMCFME+ +    NNNNN FG
Sbjct: 178 RSVKANLQKPVA------KP--SPNPSPALVQNLNNSFDNMCFMEEEKHQQVNNNNNQFG 229

Query: 598 A-----GGGNGYHQYFSSDQGSNS-----FGWSDQAPITPEISSAFINNNNSALFVEDA- 452
                  G NGY QYFSSDQGSNS     FGWSDQAPITP+ISSA IN+NNS LF E+A 
Sbjct: 230 LTNSVDAGCNGY-QYFSSDQGSNSFDCSEFGWSDQAPITPDISSALINSNNSGLFFEEAN 288

Query: 451 -SKKLKSMDFETP----EWDSSLDFLSGDAVVTEENGANPMELWSIDEIESMIGGVF 296
            +KKLKSM+FETP    EWD+SLDFL+ DAV T++N  NPM+LWSIDEI SMIGGVF
Sbjct: 289 PAKKLKSMEFETPYNNTEWDASLDFLNEDAVTTQDNCVNPMDLWSIDEIHSMIGGVF 345

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,993,367,703,379
Number of Sequences: 15229318
Number of Extensions: 5993367703379
Number of Successful Extensions: 1421579614
Number of sequences better than 0.0: 0