BLASTX 7.6.2
Query= UN58835 /QuerySize=687
(686 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G39518.1 | Symbols: | FUNCTIONS IN: molecular... 270 5e-073
TAIR9_protein||AT2G39530.1 | Symbols: | integral membrane prote... 228 2e-060
>TAIR9_protein||AT2G39518.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised
protein family UPF0497, trans-membrane plant (InterPro:IPR006702),
Uncharacterised protein family UPF0497, trans-membrane plant subgroup
(InterPro:IPR006459); BEST Arabidopsis thaliana protein match is:
integral membrane protein, putative (TAIR:AT2G39530.1); Has 80 Blast
hits to 80 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr2:16496029-16496937 REVERSE
Length = 175
Score = 270 bits (690), Expect = 5e-073
Identities = 137/161 (85%), Positives = 148/161 (91%)
Frame = +3
Query: 105 APPLVSLRVALLYLRVLTVAFLVITVIILSTNSVTIVSQGNSMKFHFKDVYAYRYMFSAA 284
+PP VSL+V LL LRVLT FLVI +IILSTNSVTIVSQG+++KFHFKDVYAYRYM SAA
Sbjct: 7 SPPAVSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAA 66
Query: 285 IIGLIYAVIQLFFTISELATRTKNPFNYQLDFYGDKIISYLVATGSAAGFGVTKDLKDTF 464
+IGL+YAVIQLFFTISE AT KNPFNYQLDFYGDK+ISYLVATGSAAGFGVTKDLKDTF
Sbjct: 67 VIGLVYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTF 126
Query: 465 LALVVLDSTDPVDKLFSRGYASASMLLFAFFCLAVLSVFSS 587
LALV LDSTDPVDK FS+GYASAS+LLFAF CLAVLSVFSS
Sbjct: 127 LALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSS 167
>TAIR9_protein||AT2G39530.1 | Symbols: | integral membrane protein, putative |
chr2:16498659-16499401 REVERSE
Length = 179
Score = 228 bits (581), Expect = 2e-060
Identities = 113/161 (70%), Positives = 134/161 (83%)
Frame = +3
Query: 105 APPLVSLRVALLYLRVLTVAFLVITVIILSTNSVTIVSQGNSMKFHFKDVYAYRYMFSAA 284
APP V+LR LL LRVLT AFL+ITV+++STN+VT+ S+K F DVYAYRYM SAA
Sbjct: 7 APPSVTLRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAA 66
Query: 285 IIGLIYAVIQLFFTISELATRTKNPFNYQLDFYGDKIISYLVATGSAAGFGVTKDLKDTF 464
+IGL+YAV+QLF TIS+ AT +P YQ DFYGDK+ISYL+ATGSAAGFGV+KDLKDT+
Sbjct: 67 VIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTY 126
Query: 465 LALVVLDSTDPVDKLFSRGYASASMLLFAFFCLAVLSVFSS 587
+AL+ DSTDPVDK FS+GYASAS+LLFAF LAVLSVFSS
Sbjct: 127 IALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSS 167
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,989,008,774
Number of Sequences: 33410
Number of Extensions: 26989008774
Number of Successful Extensions: 883720788
Number of sequences better than 0.0: 0
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