Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN58941


BLASTX 7.6.2

Query= UN58941 /QuerySize=738
        (737 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G18580.1 | Symbols:  | single-strand-binding f...    349   1e-096
TAIR9_protein||AT4G11060.1 | Symbols: MTSSB | MTSSB (mitochondri...    107   1e-023

>TAIR9_protein||AT3G18580.1 | Symbols:  | single-strand-binding family protein |
        chr3:6396940-6398068 REVERSE

          Length = 218

 Score =  349 bits (895), Expect = 1e-096
 Identities = 184/220 (83%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
 Frame = +1

Query:  52 MANSSMATLSRRLYRSLLSNPRLSQQASMSFSTTNNNNNNISDLSDTEYPLETKASGSKD 231
           MAN SMATLSRRLYRSLLSNPR+S QASMSF T N  +   SD  + E P+E KAS    
Sbjct:   1 MAN-SMATLSRRLYRSLLSNPRIS-QASMSFCTNNITSPEDSDFDELESPIEPKASDPVS 58

Query: 232 R---EERVMEERPLENGLDYGVFKAILVGQVGQLPLQKKLKNGRTVTLFSVGTGGMRNNR 402
           R   EERVMEERPLENGLD G+FKAILVGQVGQLPLQKKLK+GRTVTLFSVGTGG+RNNR
Sbjct:  59 RFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNR 118

Query: 403 RPLINEDPREYANRSEVQWHRVSVYPERLAELVLKNVEPGTLVYLEGNLETKIFSDPVTG 582
           RPLINEDPREYA+RS VQWHRVSVYPERLA+LVLKNVEPGT++YLEGNLETKIF+DPVTG
Sbjct: 119 RPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTG 178

Query: 583 LVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY* 702
           LVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY*
Sbjct: 179 LVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY* 218

>TAIR9_protein||AT4G11060.1 | Symbols: MTSSB | MTSSB (mitochondrially targeted
        single-stranded DNA binding protein); single-stranded DNA binding |
        chr4:6754820-6756230 REVERSE

          Length = 202

 Score =  107 bits (265), Expect = 1e-023
 Identities = 59/161 (36%), Positives = 97/161 (60%), Gaps = 14/161 (8%)
 Frame = +1

Query: 226 KDREERVMEERPLE-NGLD-------YGVFKAILVGQVGQLPLQKKLKNGRTVTLFSVGT 381
           +D EE V E   L+ +G+D        GV +AI+ G+VGQ PLQK L+NGRTVT+F+VGT
Sbjct:  43 EDFEENVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGT 102

Query: 382 GGMRNNRRPLINEDPREYANRSEVQWHRVSVYPERLAELVLKNVEPGTLVYLEGNLETKI 561
           GGM + R       P+        QWHR++V+ E L    ++ +   + VY+EG++ET++
Sbjct: 103 GGMFDQRLVGATNQPK------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRV 156

Query: 562 FSDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELR 684
           ++D ++  V+ I E+ +RR+G++  +     + + S  EL+
Sbjct: 157 YNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELK 197

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,083,635,444
Number of Sequences: 33410
Number of Extensions: 27083635444
Number of Successful Extensions: 888921353
Number of sequences better than 0.0: 0