Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN58992


BLASTX 7.6.2

Query= UN58992 /QuerySize=446
        (445 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297824831|ref|XP_002880298.1| cytochrome c oxidase subunit VC...    124   5e-027
gi|297797083|ref|XP_002866426.1| hypothetical protein ARALYDRAFT...    123   8e-027
gi|15226582|ref|NP_182260.1| putative cytochrome c oxidase subun...    122   2e-026
gi|297789530|ref|XP_002862722.1| cytochrome c oxidase subunit VC...    122   2e-026
gi|48428165|sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c o...    120   5e-026
gi|15240222|ref|NP_200939.1| putative cytochrome c oxidase subun...    120   7e-026
gi|119720800|gb|ABL97970.1| cytochrome-c oxidase [Brassica rapa]       117   3e-025
gi|284433760|gb|ADB85086.1| cytochrome c oxidase polypeptide Vc ...    112   1e-023
gi|255548451|ref|XP_002515282.1| Cytochrome c oxidase polypeptid...    111   2e-023
gi|48428106|sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c o...    110   7e-023
gi|255631107|gb|ACU15919.1| unknown [Glycine max]                      108   3e-022
gi|115489068|ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japo...    107   4e-022
gi|2493852|sp|Q42841.3|COX5C_HORVU RecName: Full=Cytochrome c ox...    107   5e-022
gi|194693600|gb|ACF80884.1| unknown [Zea mays]                         106   1e-021
gi|195640058|gb|ACG39497.1| cytochrome c oxidase polypeptide Vc ...    105   2e-021
gi|48428107|sp|Q8VY40.1|CX5C1_HELAN RecName: Full=Cytochrome c o...    105   2e-021
gi|224068528|ref|XP_002302765.1| predicted protein [Populus tric...    105   2e-021
gi|224101779|ref|XP_002334244.1| predicted protein [Populus tric...    105   2e-021
gi|242085866|ref|XP_002443358.1| hypothetical protein SORBIDRAFT...    105   2e-021
gi|224128314|ref|XP_002320297.1| predicted protein [Populus tric...    104   5e-021

>gi|297824831|ref|XP_002880298.1| cytochrome c oxidase subunit VC family protein
        [Arabidopsis lyrata subsp. lyrata]

          Length = 64

 Score =  124 bits (309), Expect = 5e-027
 Identities = 59/64 (92%), Positives = 60/64 (93%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHKV HATLKGPSVVKELVIGLALGLA+GGLWKMHHWNEQRKTR FYDLLERGEISVV
Sbjct:   1 MAGHKVAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 AAEE 64

>gi|297797083|ref|XP_002866426.1| hypothetical protein ARALYDRAFT_496289
        [Arabidopsis lyrata subsp. lyrata]

          Length = 64

 Score =  123 bits (307), Expect = 8e-027
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHK+ HATLKGPSVVKELVIGLALGLA+GGLWKMHHWNEQRKTRAFYDLLERGEI VV
Sbjct:   1 MAGHKIAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRAFYDLLERGEIGVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 VAEE 64

>gi|15226582|ref|NP_182260.1| putative cytochrome c oxidase subunit 5C-1
        [Arabidopsis thaliana]

          Length = 64

 Score =  122 bits (304), Expect = 2e-026
 Identities = 58/64 (90%), Positives = 59/64 (92%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHKV HATLKGPSVVKEL IGLALGLA+GGLWKMHHWNEQRKTR FYDLLERGEISVV
Sbjct:   1 MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 AAEE 64

>gi|297789530|ref|XP_002862722.1| cytochrome c oxidase subunit VC family protein
        [Arabidopsis lyrata subsp. lyrata]

          Length = 64

 Score =  122 bits (304), Expect = 2e-026
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHKV HATLKGPSVVKEL+IGL LGLA+GGLWKMHHWNEQRKTR FYDLLERGEISVV
Sbjct:   1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 AAEE 64

>gi|48428165|sp|Q9LZQ0.1|CX5C2_ARATH RecName: Full=Cytochrome c oxidase subunit
        5C-2; AltName: Full=Cytochrome c oxidase polypeptide Vc-2

          Length = 64

 Score =  120 bits (300), Expect = 5e-026
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHKV HATLKGPSVVKEL+IGL LGLA+GGLWKMHHWNEQRKTR FYDLLERGEI VV
Sbjct:   1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEIGVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 ASEE 64

>gi|15240222|ref|NP_200939.1| putative cytochrome c oxidase subunit 5C-3
        [Arabidopsis thaliana]

          Length = 64

 Score =  120 bits (299), Expect = 7e-026
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHK+ HATLKGPSVVKELVIGL LGLA+GGLWKMHHWNEQRKTR FYDLLERGEI VV
Sbjct:   1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 VTEE 64

>gi|119720800|gb|ABL97970.1| cytochrome-c oxidase [Brassica rapa]

          Length = 63

 Score =  117 bits (293), Expect = 3e-025
 Identities = 55/63 (87%), Positives = 59/63 (93%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAGHK+ HATLKGPSVVKELVIGLALGLA+GGLWKMHHWNEQRKTRAFYDLL++ EISVV
Sbjct:   1 MAGHKIAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRAFYDLLDKDEISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VAE 63

>gi|284433760|gb|ADB85086.1| cytochrome c oxidase polypeptide Vc [Jatropha
        curcas]

          Length = 63

 Score =  112 bits (279), Expect = 1e-023
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG K+ HATLKGPSVVKE+ IG+ALGLA+GGLWKMHHWNEQRK RAFYDLLE+GEISVV
Sbjct:   1 MAGGKIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VDE 63

>gi|255548451|ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putative
        [Ricinus communis]

          Length = 63

 Score =  111 bits (277), Expect = 2e-023
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG ++ HATLKGPSVVKE+ IG+ALGLA+GGLWKMHHWNEQRK RAFYDLLE+GEISVV
Sbjct:   1 MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 AEE 63

>gi|48428106|sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subunit
        5C-2; AltName: Full=Cytochrome c oxidase polypeptide Vc-2

          Length = 64

 Score =  110 bits (273), Expect = 7e-023
 Identities = 52/64 (81%), Positives = 55/64 (85%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           M G +V H  LKGPSVVKELVIG  LGLA+GGLWKMHHWNEQRKTRAFYDLLE+GEISVV
Sbjct:   1 MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 251 HPEE 262
             EE
Sbjct:  61 VDEE 64

>gi|255631107|gb|ACU15919.1| unknown [Glycine max]

          Length = 64

 Score =  108 bits (268), Expect = 3e-022
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG ++ HATL+GPSVVKE++IG+ LGLA+G +WKMHHWNEQRKTR FYDLLE+GEISVV
Sbjct:   1 MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60

Query: 251 HPEE 262
             E+
Sbjct:  61 AEEQ 64

>gi|115489068|ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japonica Group]

          Length = 63

 Score =  107 bits (267), Expect = 4e-022
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG ++ HATLKGPSVVKE+ IGL LGL +GGLWKMHHWNEQRKTR+FYD+LE+G+ISVV
Sbjct:   1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

>gi|2493852|sp|Q42841.3|COX5C_HORVU RecName: Full=Cytochrome c oxidase subunit
        5C; AltName: Full=Cytochrome c oxidase polypeptide Vc

          Length = 63

 Score =  107 bits (266), Expect = 5e-022
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V HATLKGPSVVKE+ IGL LGL +GG+WKMHHWNEQRKTR+FYD+LE+G+ISVV
Sbjct:   1 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

>gi|194693600|gb|ACF80884.1| unknown [Zea mays]

          Length = 63

 Score =  106 bits (262), Expect = 1e-021
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V HATLKGPSVVKE+ IGL LGL +GG+WKMHHWNEQRKTR+FYD+L++G+ISVV
Sbjct:   1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

>gi|195640058|gb|ACG39497.1| cytochrome c oxidase polypeptide Vc [Zea mays]

          Length = 77

 Score =  105 bits (261), Expect = 2e-021
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V HATLKGPSVVKE+ IGL LGL +GG+WKMHHWNEQRKTR+FYD+L++G+ISVV
Sbjct:   1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60

>gi|48428107|sp|Q8VY40.1|CX5C1_HELAN RecName: Full=Cytochrome c oxidase subunit
        5C-1; AltName: Full=Cytochrome c oxidase polypeptide Vc-1

          Length = 63

 Score =  105 bits (260), Expect = 2e-021
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           M G +V H  LKGPS VKEL+IG  LGLA+GGLWKMHHWNEQRKTRAFYDLLE+GEISVV
Sbjct:   1 MVGGRVAHPVLKGPSEVKELIIGSVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VQE 63

>gi|224068528|ref|XP_002302765.1| predicted protein [Populus trichocarpa]

          Length = 63

 Score =  105 bits (260), Expect = 2e-021
 Identities = 48/63 (76%), Positives = 54/63 (85%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V H TLKGPSVVKE+ IG+ALGLA+G LWKMHHWNEQRK R+FYDLLE+GEI VV
Sbjct:   1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

>gi|224101779|ref|XP_002334244.1| predicted protein [Populus trichocarpa]

          Length = 63

 Score =  105 bits (260), Expect = 2e-021
 Identities = 48/63 (76%), Positives = 54/63 (85%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V H TLKGPSVVKE+ IG+ALGLA+G LWKMHHWNEQRK R+FYDLLE+GEI VV
Sbjct:   1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VKE 63

>gi|242085866|ref|XP_002443358.1| hypothetical protein SORBIDRAFT_08g018180
        [Sorghum bicolor]

          Length = 63

 Score =  105 bits (260), Expect = 2e-021
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V HATLKGPSVVKE+ IG+ LGL +GG+WKMHHWNEQRKTR+FYD+L++G+ISVV
Sbjct:   1 MAGGRVAHATLKGPSVVKEIFIGMTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

>gi|224128314|ref|XP_002320297.1| predicted protein [Populus trichocarpa]

          Length = 63

 Score =  104 bits (257), Expect = 5e-021
 Identities = 48/63 (76%), Positives = 53/63 (84%)
 Frame = +2

Query:  71 MAGHKVVHATLKGPSVVKELVIGLALGLASGGLWKMHHWNEQRKTRAFYDLLERGEISVV 250
           MAG +V H TLKGPSVV+EL IG ALGL +G LWKMHHWNEQRK R+FYDLLE+GEISVV
Sbjct:   1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVV 60

Query: 251 HPE 259
             E
Sbjct:  61 VEE 63

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,122,805,816
Number of Sequences: 15229318
Number of Extensions: 6079122805816
Number of Successful Extensions: 1432667303
Number of sequences better than 0.0: 0