Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN59040


BLASTX 7.6.2

Query= UN59040 /QuerySize=820
        (819 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9LPC4|PPR1_ARATH Pentatricopeptide repeat-containing protein...    223   2e-057

>sp|Q9LPC4|PPR1_ARATH Pentatricopeptide repeat-containing protein At1g01970
        OS=Arabidopsis thaliana GN=At1g01970 PE=2 SV=1

          Length = 409

 Score =  223 bits (566), Expect = 2e-057
 Identities = 130/238 (54%), Positives = 164/238 (68%), Gaps = 21/238 (8%)
 Frame = +3

Query:  60 MGFYSSSAVLNSAF-FPCVSSGSLYFSPRRRRSPFFFVQESPLRFCR-KCTTTMV---VV 224
           MG YS SAVL+     P V +    +    RR+P   V+    R C  KC  ++    VV
Sbjct:   1 MGIYSCSAVLSFGLKCPLVIARHRLYHRMFRRNP-LLVESHLNRLCSCKCNASLAIGEVV 59

Query: 225 DKEE----KGPNWVDLNHHNHHQITEEQEEAISRIPVNMSKRCQALMKQIIICL---EDS 383
           +KE+    +  NW D+  +    +TEEQ+EAI+RIP+ MSKRCQALM+Q IIC    + S
Sbjct:  60 EKEDAEQSRSFNWADVGLN----LTEEQDEAITRIPIKMSKRCQALMRQ-IICFSPEKGS 114

Query: 384 FCCDDMLAAWVKRMKPIRADWLSLLKHLNTLDSPFYIKVAEYALLEDSFEANPRDYTKII 563
           FC  D+L AW++RM PIRADWLS+LK L  LDSPFYIKVAE++LL+DSFEAN RDYTKII
Sbjct: 115 FC--DLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKII 172

Query: 564 HYYGKLNQIQDAENTLVAMKNRGFLIDQVTLTAMLQSYSKSAITAWLRH-FHDVNCLG 734
           HYYGKLNQ++DAE TL++MKNRGFLIDQVTLTAM+Q YSK+         F+++  LG
Sbjct: 173 HYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLG 230

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,982,208,808
Number of Sequences: 518415
Number of Extensions: 210982208808
Number of Successful Extensions: 1289689628
Number of sequences better than 0.0: 0