BLASTX 7.6.2
Query= UN59052 /QuerySize=677
(676 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297830280|ref|XP_002883022.1| hypothetical protein ARALYDRAFT... 273 2e-071
gi|21593806|gb|AAM65773.1| putative RING zinc finger protein [Ar... 272 3e-071
gi|15228302|ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabid... 269 3e-070
gi|3873408|gb|AAC77829.1| putative zinc finger protein [Arabidop... 267 1e-069
gi|337733634|gb|AEI72266.1| ring zinc finger transcription facto... 210 2e-052
gi|255551823|ref|XP_002516957.1| ring finger protein, putative [... 208 9e-052
gi|224130500|ref|XP_002328624.1| predicted protein [Populus tric... 200 1e-049
gi|224110402|ref|XP_002315508.1| predicted protein [Populus tric... 197 1e-048
gi|225431782|ref|XP_002271253.1| PREDICTED: hypothetical protein... 191 7e-047
gi|57117314|gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus... 190 3e-046
gi|225431784|ref|XP_002271292.1| PREDICTED: hypothetical protein... 188 8e-046
gi|297821176|ref|XP_002878471.1| hypothetical protein ARALYDRAFT... 172 6e-041
gi|4928401|gb|AAD33583.1|AF132015_1 RING-H2 zinc finger protein ... 169 4e-040
gi|15228830|ref|NP_191828.1| RING-H2 finger protein ATL5 [Arabid... 168 8e-040
gi|297804618|ref|XP_002870193.1| hypothetical protein ARALYDRAFT... 158 6e-037
gi|2244955|emb|CAB10376.1| regulatory protein [Arabidopsis thali... 151 8e-035
gi|21537244|gb|AAM61585.1| unknown [Arabidopsis thaliana] 128 7e-028
gi|186511856|ref|NP_567480.2| RING-H2 finger protein ATL17 [Arab... 127 2e-027
gi|68565206|sp|Q8LF65.2|ATL17_ARATH RecName: Full=RING-H2 finger... 121 1e-025
gi|226499734|ref|NP_001148308.1| RING-H2 finger protein ATL2K [Z... 101 1e-019
>gi|297830280|ref|XP_002883022.1| hypothetical protein ARALYDRAFT_479140
[Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 273 bits (697), Expect = 2e-071
Identities = 144/197 (73%), Positives = 156/197 (79%), Gaps = 10/197 (5%)
Frame = +2
Query: 98 MNSNDQYRMGTPDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 277
MN+ND + S+TYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR
Sbjct: 1 MNTNDPDPIPFNRPEDNISGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVA---AASRGLDPAVIKSLPVFAFSESTHKDLLTE 448
RRH RRRSRNRR+TMVFF ADPST A ASRGLDP VIKSLPVF FS+ THKD + E
Sbjct: 61 RRHLRRRSRNRRATMVFF-TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-E 118
Query: 449 CAVCLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP-----EVTATVE 613
CAVCLSEFEE ESGRVLP CKHTFHVDCIDMWFHSHSTCPLCRSLV+P + AT E
Sbjct: 119 CAVCLSEFEESESGRVLPNCKHTFHVDCIDMWFHSHSTCPLCRSLVEPLAGIELMEATTE 178
Query: 614 EQVVITVSPEPVSAVEP 664
+VVI + +PVSA+EP
Sbjct: 179 GEVVIAIGSDPVSAIEP 195
>gi|21593806|gb|AAM65773.1| putative RING zinc finger protein [Arabidopsis
thaliana]
Length = 304
Score = 272 bits (695), Expect = 3e-071
Identities = 143/197 (72%), Positives = 154/197 (78%), Gaps = 10/197 (5%)
Frame = +2
Query: 98 MNSNDQYRMGTPDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 277
MNSNDQ + E S+TYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR
Sbjct: 1 MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVA---AASRGLDPAVIKSLPVFAFSESTHKDLLTE 448
RRH RRRSRNRR+TMVFF ADPST A ASRGLDP VIKSLPVF FS+ THKD + E
Sbjct: 61 RRHLRRRSRNRRATMVFF-TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-E 118
Query: 449 CAVCLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP-----EVTATVE 613
CAVCLSEFEE E+GRVLP C+HTFHVDCIDMWFHSHSTCPLCRSLV+P A E
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVEPLAGIESTAAARE 178
Query: 614 EQVVITVSPEPVSAVEP 664
+VVI V +PV +EP
Sbjct: 179 REVVIAVDSDPVLVIEP 195
>gi|15228302|ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabidopsis
thaliana]
Length = 304
Score = 269 bits (687), Expect = 3e-070
Identities = 142/197 (72%), Positives = 153/197 (77%), Gaps = 10/197 (5%)
Frame = +2
Query: 98 MNSNDQYRMGTPDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 277
MNSNDQ + E S+TYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR
Sbjct: 1 MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVA---AASRGLDPAVIKSLPVFAFSESTHKDLLTE 448
RRH RRRSRNRR+TMVFF ADPST A ASRGLDP VIKSLPVF FS+ THKD + E
Sbjct: 61 RRHLRRRSRNRRATMVFF-TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-E 118
Query: 449 CAVCLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVK-----PEVTATVE 613
CAVCLSEFEE E+GRVLP C+HTFHVDCIDMWFHSHSTCPLCRSLV+ A E
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 178
Query: 614 EQVVITVSPEPVSAVEP 664
+VVI V +PV +EP
Sbjct: 179 REVVIAVDSDPVLVIEP 195
>gi|3873408|gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]
Length = 304
Score = 267 bits (681), Expect = 1e-069
Identities = 141/197 (71%), Positives = 152/197 (77%), Gaps = 10/197 (5%)
Frame = +2
Query: 98 MNSNDQYRMGTPDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 277
MNSNDQ + E S+TYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR
Sbjct: 1 MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVA---AASRGLDPAVIKSLPVFAFSESTHKDLLTE 448
RRH RRRSRNRR+TMVFF ADP T A ASRGLDP VIKSLPVF FS+ THKD + E
Sbjct: 61 RRHLRRRSRNRRATMVFF-TADPFTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-E 118
Query: 449 CAVCLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVK-----PEVTATVE 613
CAVCLSEFEE E+GRVLP C+HTFHVDCIDMWFHSHSTCPLCRSLV+ A E
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 178
Query: 614 EQVVITVSPEPVSAVEP 664
+VVI V +PV +EP
Sbjct: 179 REVVIAVDSDPVLVIEP 195
>gi|337733634|gb|AEI72266.1| ring zinc finger transcription factor [Citrus
trifoliata]
Length = 234
Score = 210 bits (533), Expect = 2e-052
Identities = 113/184 (61%), Positives = 137/184 (74%), Gaps = 9/184 (4%)
Frame = +2
Query: 134 DETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRR 313
D ++ +R YA+SG+IMLS+IVILFFVVILMV LHLYARWYL++ARRR RR R+RR
Sbjct: 6 DPRGSNSDNRGYALSGRIMLSSIVILFFVVILMVCLHLYARWYLVQARRRQVRRH-RHRR 64
Query: 314 STMVFFAAADPSTVAA-ASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESG 490
+ VF+ DP+ +A +SRGLD +V+KSLPVF +S TH D + +CAVCLSEFEE ESG
Sbjct: 65 TQFVFY--VDPTNPSATSSRGLDSSVLKSLPVFVYSSKTHADAM-DCAVCLSEFEENESG 121
Query: 491 RVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQVVITVSPEP--VSAVEP 664
RVLPGC H+FH+ CIDMWFHSHSTCPLCR+ V E+ E V +P P VS EP
Sbjct: 122 RVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV--ELVTAQPEDPVQPDNPVPVRVSVHEP 179
Query: 665 GSSS 676
GSSS
Sbjct: 180 GSSS 183
>gi|255551823|ref|XP_002516957.1| ring finger protein, putative [Ricinus
communis]
Length = 292
Score = 208 bits (527), Expect = 9e-052
Identities = 103/158 (65%), Positives = 122/158 (77%), Gaps = 7/158 (4%)
Frame = +2
Query: 128 TPDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRN 307
+PD T++ YA+SGKIMLSAI+ILFFVVI+MV LHLYARWYLL ARRR RR+RN
Sbjct: 5 SPDADNEYSTTKGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQ-HRRARN 63
Query: 308 RRSTMVFFAAADPS---TVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEE 478
RR+ ++F+ DPS V SRGLD AV+ +LPVFA+S TH D + ECAVCLSEFEE
Sbjct: 64 RRAHLIFY--VDPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPI-ECAVCLSEFEE 120
Query: 479 GESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP 592
E GR LP C H+FH++CIDMWFHSHSTCPLCRS V+P
Sbjct: 121 NERGRTLPKCNHSFHIECIDMWFHSHSTCPLCRSAVEP 158
>gi|224130500|ref|XP_002328624.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 200 bits (508), Expect = 1e-049
Identities = 103/153 (67%), Positives = 119/153 (77%), Gaps = 5/153 (3%)
Frame = +2
Query: 167 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF--AAA 340
YA+SGKIMLSAIVILFFVVILMVFLHLYARWYL RAR+R RR RNRR+ +VF+ +A
Sbjct: 16 YALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQV-RRVRNRRTHLVFYVDSAQ 74
Query: 341 DPSTVAA-ASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKHT 517
DP+ V + +RGL+ V SLPVF +S TH+D + ECAVCLSEFEE E GRVLP C H+
Sbjct: 75 DPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSI-ECAVCLSEFEENERGRVLPKCNHS 133
Query: 518 FHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEE 616
FH +CIDMWFHSHSTCPLCRS V+P V E
Sbjct: 134 FHTECIDMWFHSHSTCPLCRSPVEPVAENPVPE 166
>gi|224110402|ref|XP_002315508.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 197 bits (500), Expect = 1e-048
Identities = 96/153 (62%), Positives = 121/153 (79%), Gaps = 5/153 (3%)
Frame = +2
Query: 167 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF--AAA 340
+A+SGKIMLSA+VILF V+ILMV LH YARWYL+RARRRH R +RNRR+ +VF+ +A
Sbjct: 1 FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHI-RHARNRRNHLVFYVDSAH 59
Query: 341 DPSTVAA-ASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKHT 517
+P+ V +RGL+ V+KSLPVF +SE TH+D + ECAVCLSEF+E E+GR LP C H+
Sbjct: 60 NPTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDSM-ECAVCLSEFQENETGRTLPKCNHS 118
Query: 518 FHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEE 616
FH+ CIDMWFHSHSTCPLCRS V+P V++
Sbjct: 119 FHIGCIDMWFHSHSTCPLCRSPVEPVTENPVQD 151
>gi|225431782|ref|XP_002271253.1| PREDICTED: hypothetical protein isoform 1
[Vitis vinifera]
Length = 317
Score = 191 bits (485), Expect = 7e-047
Identities = 100/186 (53%), Positives = 126/186 (67%), Gaps = 11/186 (5%)
Frame = +2
Query: 131 PDETTTSGTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNR 310
P++ + + + YA+SGKIMLSAIVILF VV+LMV LH+YARWYL R RRRH R R
Sbjct: 8 PEDWSANNAATGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHAR--ARR 65
Query: 311 RSTMVFFAAADPSTVAAA----SRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEE 478
R +VF+ DP+ AA+ +RGLD +++ SLPVF +S TH D ++ECAVCLSEFEE
Sbjct: 66 RHHLVFY--VDPTNPAASVSSPTRGLDASILNSLPVFVYSSKTHTD-MSECAVCLSEFEE 122
Query: 479 GESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQVVITVSPEPVSAV 658
E GR LP C H+FH+ CIDMWFHSHSTCPLCRS V E + + V ++
Sbjct: 123 NEKGRRLPKCNHSFHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVI--SMAET 180
Query: 659 EPGSSS 676
E GS+S
Sbjct: 181 EGGSTS 186
>gi|57117314|gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x
Populus alba]
Length = 293
Score = 190 bits (480), Expect = 3e-046
Identities = 96/153 (62%), Positives = 116/153 (75%), Gaps = 5/153 (3%)
Frame = +2
Query: 167 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF--AAA 340
YA+SGKIMLSAI+ILFFV+I+MV LHLYARWYL RAR+R RR RNRR+ +VF+ +
Sbjct: 16 YALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQV-RRVRNRRTHLVFYVDSPQ 74
Query: 341 DPSTVAA-ASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKHT 517
+P+ V + +RGL+ V SLPVF + TH+D + ECAVCLSEFEE E GRVLP C H+
Sbjct: 75 NPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQDSI-ECAVCLSEFEENERGRVLPKCNHS 133
Query: 518 FHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEE 616
FH +CIDMWFHSHSTCPLCRS V+P V E
Sbjct: 134 FHTECIDMWFHSHSTCPLCRSPVEPVAENPVPE 166
>gi|225431784|ref|XP_002271292.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 320
Score = 188 bits (476), Expect = 8e-046
Identities = 99/174 (56%), Positives = 120/174 (68%), Gaps = 11/174 (6%)
Frame = +2
Query: 167 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFFAAADP 346
YA+SGKIMLSAIVILF VV+LMV LH+YARWYL R RRRH R RR +VF+ DP
Sbjct: 23 YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHAR--ARRRHHLVFY--VDP 78
Query: 347 STVAAA----SRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKH 514
+ AA+ +RGLD +++ SLPVF +S TH D ++ECAVCLSEFEE E GR LP C H
Sbjct: 79 TNPAASVSSPTRGLDASILNSLPVFVYSSKTHTD-MSECAVCLSEFEENEKGRRLPKCNH 137
Query: 515 TFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQVVITVSPEPVSAVEPGSSS 676
+FH+ CIDMWFHSHSTCPLCRS V E + + V ++ E GS+S
Sbjct: 138 SFHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVI--SMAETEGGSTS 189
>gi|297821176|ref|XP_002878471.1| hypothetical protein ARALYDRAFT_907844
[Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 172 bits (434), Expect = 6e-041
Identities = 89/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Frame = +2
Query: 152 GTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF 331
G+SR Y+++GKIML++++ILFF VIL++ H YARW R RR RR S + RS
Sbjct: 18 GSSR-YSLNGKIMLASVIILFFAVILILCFHSYARWLFRRQNRRIRRRISAHLRS---LA 73
Query: 332 AAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCK 511
AA DP+ +++ LDP V++ +P+F +S TH+ L EC+VCLSEFEE + GRVLP C
Sbjct: 74 AARDPTQSSSSLSPLDPTVLEKIPIFVYSAKTHESPLEECSVCLSEFEEDDEGRVLPKCG 133
Query: 512 HTFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQV-VITVSPEPVSAVEPGSSS 676
H FHVDCID WF S S+CPLCR+ V+P T E V + S +PV E GSSS
Sbjct: 134 HVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTESEPVAAVFPSVKPVEDTEAGSSS 189
>gi|4928401|gb|AAD33583.1|AF132015_1 RING-H2 zinc finger protein ATL5
[Arabidopsis thaliana]
Length = 257
Score = 169 bits (427), Expect = 4e-040
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Frame = +2
Query: 152 GTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF 331
G+SR Y+++GKIML++++ILF VIL++ H YARW R RR RR S + RS
Sbjct: 18 GSSR-YSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRS---LA 73
Query: 332 AAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCK 511
AA DP+ +++ LDPAV++ +P+F +S TH+ L EC+VCLSEFEE + GRVLP C
Sbjct: 74 AARDPTQSSSSLSPLDPAVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCC 133
Query: 512 HTFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQV-VITVSPEPVSAVEPGSSS 676
H FHVDCID WF S S+CPLCR+ V+P T E V + S +P+ E GSSS
Sbjct: 134 HVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSS 189
>gi|15228830|ref|NP_191828.1| RING-H2 finger protein ATL5 [Arabidopsis
thaliana]
Length = 257
Score = 168 bits (424), Expect = 8e-040
Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 5/176 (2%)
Frame = +2
Query: 152 GTSRTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFF 331
G+SR Y+++GKIML++++ILF VIL++ H YARW R RR RR S + RS
Sbjct: 18 GSSR-YSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRS---LA 73
Query: 332 AAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCK 511
AA DP+ +++ LDP V++ +P+F +S TH+ L EC+VCLSEFEE + GRVLP C
Sbjct: 74 AARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCG 133
Query: 512 HTFHVDCIDMWFHSHSTCPLCRSLVKPEVTATVEEQV-VITVSPEPVSAVEPGSSS 676
H FHVDCID WF S S+CPLCR+ V+P T E V + S +P+ E GSSS
Sbjct: 134 HVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSS 189
>gi|297804618|ref|XP_002870193.1| hypothetical protein ARALYDRAFT_329916
[Arabidopsis lyrata subsp. lyrata]
Length = 242
Score = 158 bits (399), Expect = 6e-037
Identities = 81/147 (55%), Positives = 103/147 (70%), Gaps = 10/147 (6%)
Frame = +2
Query: 206 ILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFFAAADPSTVAAASRGLDPA 385
++ F+ ILMV LHL +RWYLLR+ R F R + + + FFA + V S GL+P+
Sbjct: 7 LILFIAILMVSLHLCSRWYLLRSSR--FNRTA----AALTFFANPSSTAVVTTSGGLNPS 60
Query: 386 VIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTC 565
VIKSLP+F FS +T + ECAVCLS F + ESGRVLP CKHTFHV CIDMWFHSHS+C
Sbjct: 61 VIKSLPIFTFSAATAQKNAIECAVCLSAFVDNESGRVLPNCKHTFHVHCIDMWFHSHSSC 120
Query: 566 PLCRSLVKP---EVTATVEEQVVITVS 637
PLCRSL++P V +T +E V I++S
Sbjct: 121 PLCRSLIEPFAGGVKSTTDE-VAISIS 146
>gi|2244955|emb|CAB10376.1| regulatory protein [Arabidopsis thaliana]
Length = 441
Score = 151 bits (381), Expect = 8e-035
Identities = 82/159 (51%), Positives = 108/159 (67%), Gaps = 17/159 (10%)
Frame = +2
Query: 182 KIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHFRRRSRNRRSTMVFFAAADPSTVAA 361
KIML+ +++ +VILMV LHLY RWYLLR+ S R+T DPS+
Sbjct: 205 KIMLTTTILILLIVILMVSLHLYYRWYLLRS--------SPFNRTTAASTFFTDPSSTPG 256
Query: 362 ASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCLSEFEEGESGRVLPGCKHTFHVDCIDM 541
GL+P++IKSLP+F FS T EC+VCLSEF++ ESGRV+P CKHTFHV CIDM
Sbjct: 257 ---GLNPSIIKSLPIFTFSAVTAL-FAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDM 312
Query: 542 WFHSHSTCPLCRSLVKP---EVTATVEEQVVITVSPEPV 649
WFHSHS+CPLCRS ++P V ++++E V I++S +PV
Sbjct: 313 WFHSHSSCPLCRSQIEPFAGGVKSSMDE-VAISIS-DPV 349
>gi|21537244|gb|AAM61585.1| unknown [Arabidopsis thaliana]
Length = 235
Score = 128 bits (321), Expect = 7e-028
Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 9/127 (7%)
Frame = +2
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAV 457
R + R S R+T DPS+ GL+P++IKSLP+F FS T ++ + +C+V
Sbjct: 23 RWYLLRSSPFNRTTAASTFFTDPSSTPG---GLNPSIIKSLPIFTFSAVTAQNAM-KCSV 78
Query: 458 CLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP---EVTATVEEQVVI 628
CLSEF++ ESGRV+P CKHTFHVDCIDMWFHSHS+CPLCRSL++P V +T++E V I
Sbjct: 79 CLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEPFAGGVKSTMDE-VAI 137
Query: 629 TVSPEPV 649
++S +PV
Sbjct: 138 SIS-DPV 143
>gi|186511856|ref|NP_567480.2| RING-H2 finger protein ATL17 [Arabidopsis
thaliana]
Length = 235
Score = 127 bits (318), Expect = 2e-027
Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 9/127 (7%)
Frame = +2
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAV 457
R + R S R+T DPS+ GL+P++IKSLP+F FS T EC+V
Sbjct: 23 RWYLLRSSPFNRTTAASTFFTDPSSTPG---GLNPSIIKSLPIFTFSAVTAL-FAMECSV 78
Query: 458 CLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP---EVTATVEEQVVI 628
CLSEF++ ESGRV+P CKHTFHVDCIDMWFHSHS+CPLCRSL++P V +T++E V I
Sbjct: 79 CLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEPFAGGVKSTMDE-VAI 137
Query: 629 TVSPEPV 649
++S +PV
Sbjct: 138 SIS-DPV 143
>gi|68565206|sp|Q8LF65.2|ATL17_ARATH RecName: Full=RING-H2 finger protein ATL17
Length = 235
Score = 121 bits (301), Expect = 1e-025
Identities = 65/127 (51%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Frame = +2
Query: 278 RRHFRRRSRNRRSTMVFFAAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAV 457
R + R S R+T DPS+ GL+P++IKSLP+F FS T EC+V
Sbjct: 23 RWYLLRSSPFNRTTAASTFFTDPSSTPG---GLNPSIIKSLPIFTFSAVTAL-FAMECSV 78
Query: 458 CLSEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP---EVTATVEEQVVI 628
CLSEF++ ESGRV+P CKHTFHV CIDMWFHSHS+CPLCRS ++P V ++++E V I
Sbjct: 79 CLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDE-VAI 137
Query: 629 TVSPEPV 649
++S +PV
Sbjct: 138 SIS-DPV 143
>gi|226499734|ref|NP_001148308.1| RING-H2 finger protein ATL2K [Zea mays]
Length = 238
Score = 101 bits (250), Expect = 1e-019
Identities = 45/103 (43%), Positives = 62/103 (60%)
Frame = +2
Query: 284 HFRRRSRNRRSTMVFFAAADPSTVAAASRGLDPAVIKSLPVFAFSESTHKDLLTECAVCL 463
H RRR+R R + ++ A + AA RGLDPA + +LP + ++ D EC +CL
Sbjct: 58 HVRRRNRRRAAAVLPTTTAAAAAAAAPKRGLDPAAVAALPTVLYRDAGGADDGAECTICL 117
Query: 464 SEFEEGESGRVLPGCKHTFHVDCIDMWFHSHSTCPLCRSLVKP 592
+EGE R LP C H FHV C+D WF S S+CP+CR+ V+P
Sbjct: 118 GAVQEGELVRALPACGHVFHVPCVDTWFASSSSCPVCRAEVEP 160
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,122,805,816
Number of Sequences: 15229318
Number of Extensions: 6079122805816
Number of Successful Extensions: 1432667303
Number of sequences better than 0.0: 0
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