BLASTX 7.6.2
Query= UN59203 /QuerySize=778
(777 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 263 1e-070
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 263 1e-070
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 111 9e-025
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 103 2e-022
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 84 7e-017
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 75 5e-014
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 74 7e-014
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 74 7e-014
TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotei... 74 1e-013
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 62 5e-010
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 59 2e-009
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 57 1e-008
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 55 3e-008
TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (... 55 6e-008
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 54 7e-008
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 54 7e-008
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 263 bits (670), Expect = 1e-070
Identities = 145/199 (72%), Positives = 162/199 (81%), Gaps = 13/199 (6%)
Frame = +1
Query: 97 SFQSNP----HSSHSTPSPPPLCNLKPMHSLPRPKPFLLSPRATLETEEKP-ALDPNAES 261
SFQS H+ + S P +L S F+ P A ETEEKP ALDP++E+
Sbjct: 17 SFQSESFTPLHTRVNVFSSKPFPSLAGTFSRSSRTRFI--PYAVTETEEKPAALDPSSEA 74
Query: 262 SRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVI 441
+RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+
Sbjct: 75 ARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVV 134
Query: 442 EKLNGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSEDSAFVDSPYKVYVGNLAKSV 621
EKLNG T+EGRE+KVNITEKP+ +SSPDLS+LQSEDSAFVDSPYKVYVGNLAK+V
Sbjct: 135 EKLNGNTVEGREIKVNITEKPI------ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTV 188
Query: 622 TKEMLENLFSEKGKVLSAK 678
TKEMLENLFSEKGKV+SAK
Sbjct: 189 TKEMLENLFSEKGKVVSAK 207
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 263 bits (670), Expect = 1e-070
Identities = 145/199 (72%), Positives = 162/199 (81%), Gaps = 13/199 (6%)
Frame = +1
Query: 97 SFQSNP----HSSHSTPSPPPLCNLKPMHSLPRPKPFLLSPRATLETEEKP-ALDPNAES 261
SFQS H+ + S P +L S F+ P A ETEEKP ALDP++E+
Sbjct: 17 SFQSESFTPLHTRVNVFSSKPFPSLAGTFSRSSRTRFI--PYAVTETEEKPAALDPSSEA 74
Query: 262 SRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVI 441
+RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+
Sbjct: 75 ARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVV 134
Query: 442 EKLNGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSEDSAFVDSPYKVYVGNLAKSV 621
EKLNG T+EGRE+KVNITEKP+ +SSPDLS+LQSEDSAFVDSPYKVYVGNLAK+V
Sbjct: 135 EKLNGNTVEGREIKVNITEKPI------ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTV 188
Query: 622 TKEMLENLFSEKGKVLSAK 678
TKEMLENLFSEKGKV+SAK
Sbjct: 189 TKEMLENLFSEKGKVVSAK 207
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 111 bits (275), Expect = 9e-025
Identities = 57/153 (37%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Frame = +1
Query: 220 ETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFG 399
E EE+ + R+Y+GN+P T+T+ +L+++ E G V VQ++YDK + RSR FG
Sbjct: 101 EVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFG 160
Query: 400 FATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSEDSAFVD 579
F TM S+E+A ++ N + I GR VKVN E P + + ++ + ++VD
Sbjct: 161 FVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVP----RGGENEVMRTKIRDNNRSYVD 216
Query: 580 SPYKVYVGNLAKSVTKEMLENLFSEKGKVLSAK 678
SP+KVY GNL ++T + L++ F ++ VL AK
Sbjct: 217 SPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAK 249
Score = 59 bits (140), Expect = 4e-009
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 435
+S +VY GN+ +T++ L + V +V+Y++ +GRSR FGF + +S E+ +
Sbjct: 216 DSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQS 275
Query: 436 VIEKLNGTTIEGREVKVNIT---EKP 504
+ +NG +EGR +++N+ EKP
Sbjct: 276 ALATMNGVEVEGRALRLNLASEREKP 301
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 103 bits (255), Expect = 2e-022
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
Frame = +1
Query: 235 PALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMK 414
P + + + ++++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM
Sbjct: 81 PPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMS 140
Query: 415 SVEDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSED------SAFV 576
SV + A ++ NG ++GR ++VN P + S P S S +
Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGA 200
Query: 577 DSPYKVYVGNLAKSVTKEMLENLFSEKGKVLSAK 678
S +VYVGNL+ V LE+LFSE+GKV+ A+
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEAR 234
Score = 66 bits (160), Expect = 2e-011
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +1
Query: 253 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 432
A S RVY+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T S ++
Sbjct: 200 AGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQ 259
Query: 433 AVIEKLNGTTIEGREVKVNITE 498
I+ L+G ++GR+++V+ E
Sbjct: 260 NAIKSLDGADLDGRQIRVSEAE 281
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 84 bits (207), Expect = 7e-017
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +1
Query: 256 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 435
E + RVY+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 436 VIEKLNGTTIEGREVKVNITEK 501
I L+G +EGR ++VN+ E+
Sbjct: 301 AISALDGQNLEGRAIRVNVAEE 322
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 75 bits (182), Expect = 5e-014
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 KPALDPNA-ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFAT 408
+P P +++ R+Y+GN+P V + +L +L EHG V +V+ D+ +GRSR FGF
Sbjct: 195 RPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQ 254
Query: 409 MKSVEDANAVIEKLNGTTIEGREVKVNITEK 501
M + + N I L+G +EGR +KVN+ E+
Sbjct: 255 MSNENEVNVAIAALDGQNLEGRAIKVNVAEE 285
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 74 bits (181), Expect = 7e-014
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 268 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 447
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 448 LNGTTIEGREVKVNITEKPLELSSSSSSSP 537
NG EGR ++VN P + S S P
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGP 189
Score = 68 bits (164), Expect = 6e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 259 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 438
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 439 IEKLNGTTIEGREVKVNITE 498
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 74 bits (181), Expect = 7e-014
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 268 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 447
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 448 LNGTTIEGREVKVNITEKPLELSSSSSSSP 537
NG EGR ++VN P + S S P
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGP 189
Score = 68 bits (164), Expect = 6e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 259 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 438
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 439 IEKLNGTTIEGREVKVNITE 498
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 294
Score = 74 bits (179), Expect = 1e-013
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Frame = +1
Query: 271 VYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKL 450
+Y+ NIPR+ QL + + G V V+V + +G SR G+ TM S+ A I L
Sbjct: 110 LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASL 169
Query: 451 NGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSEDSAFVDSPYKVYVGNLAKSVTKE 630
+GT + GRE++V + ++++ + +P++ + +S +KVYVGNL +
Sbjct: 170 DGTEVGGREMRVRYS---VDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPD 226
Query: 631 MLENLFSEKGKVLSAK 678
L N FS+ G ++S +
Sbjct: 227 GLRNHFSKFGTIVSTR 242
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 62 bits (148), Expect = 5e-010
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 232 KPALDP-NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFAT 408
KP +P E+ ++++GN+ TVT+E L E G V +V++D +GRSR +GF
Sbjct: 165 KPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVC 224
Query: 409 MKSVEDANAVIEKLNGTTIEGREVKVNITE 498
S + +E L+G +EGR ++VN+ +
Sbjct: 225 YSSKAEMETALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 59 bits (142), Expect = 2e-009
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = +1
Query: 259 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 438
SS +++IG + ++ + L + ++G V +V+ D+ +GRSR FGF T S E A++
Sbjct: 38 SSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSA 97
Query: 439 IEKLNGTTIEGREVKVN 489
I+ L+G + GR VKVN
Sbjct: 98 IQALDGRDLHGRVVKVN 114
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 57 bits (135), Expect = 1e-008
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +1
Query: 250 NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDA 429
+ S +++G++ VT+ L + + +VM+D+ +GRSR FGF + ++ +DA
Sbjct: 139 DTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 198
Query: 430 NAVIEKLNGTTIEGREVKVNITEKPL-----ELSSSSSSSPDLSLLQSED 564
I ++NG + R+++ N K +LSS S +L+ SED
Sbjct: 199 QTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSED 248
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 55 bits (132), Expect = 3e-008
Identities = 27/110 (24%), Positives = 54/110 (49%)
Frame = +1
Query: 250 NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDA 429
+ S +++G++ VT+ L + +VM+D+ +GRSR FGF + ++ +DA
Sbjct: 143 DTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 202
Query: 430 NAVIEKLNGTTIEGREVKVNITEKPLELSSSSSSSPDLSLLQSEDSAFVD 579
I ++NG + R+++ N K SS S+++ + + D
Sbjct: 203 QTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSED 252
>TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:16225483-16227423 FORWARD
Length = 424
Score = 55 bits (130), Expect = 6e-008
Identities = 28/108 (25%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 223 TEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGF 402
T + ++ N ++++++G IP +V +++ + + G +++ Q+M D +GRSR FGF
Sbjct: 116 TIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGF 175
Query: 403 ATMKSVEDANAVIEKLNGTTIEGREVKVNITE--KPLELSSSSSSSPD 540
T +S + + ++ K N + G +V++ E KP +++ S D
Sbjct: 176 VTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGD 223
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 54 bits (129), Expect = 7e-008
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 253 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 432
+E R ++G + +E L + + G V +++ D+ SGRSR FGF T K +
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 433 AVIEKLNGTTIEGREVKVN 489
IE++NG ++GR + VN
Sbjct: 62 DAIEEMNGKELDGRVITVN 80
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 54 bits (129), Expect = 7e-008
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 253 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 432
+E R ++G + +E L + + G V +++ D+ SGRSR FGF T K +
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 433 AVIEKLNGTTIEGREVKVN 489
IE++NG ++GR + VN
Sbjct: 62 DAIEEMNGKELDGRVITVN 80
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,180,101,359
Number of Sequences: 33410
Number of Extensions: 27180101359
Number of Successful Extensions: 894184999
Number of sequences better than 0.0: 0
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