BLASTX 7.6.2
Query= UN59357 /QuerySize=665
(664 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protei... 295 2e-079
sp|Q84J71|PP161_ARATH Pentatricopeptide repeat-containing protei... 59 2e-008
sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protei... 57 1e-007
sp|Q8GYM2|PP393_ARATH Pentatricopeptide repeat-containing protei... 55 4e-007
sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protei... 53 2e-006
sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protei... 53 2e-006
sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protei... 52 2e-006
sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protei... 52 3e-006
sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa s... 52 4e-006
sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protei... 51 5e-006
sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protei... 51 7e-006
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 295 bits (755), Expect = 2e-079
Identities = 141/172 (81%), Positives = 160/172 (93%), Gaps = 5/172 (2%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DMNRATQTI+EMEA+GVKPN+KTYTTLIKGWARASLPEKAL+CYEEMKA+G+KPDKAVYH
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIEGSGGELTET 303
CL+TSLLSRAS+AE YIYSGVM+ICKEMVEAGLIVDMGTAV WS+CLCKIE SGGELTET
Sbjct: 839 CLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTET 898
Query: 302 LQKTFPPDWSSHHHHHRSYLDQVSDLDSEDDDVE----DSDDDVDLVSGILS 159
LQKTFPPDWSSHHHHH +LDQVSD+DS++DDV+ + D+DV+ VS +LS
Sbjct: 899 LQKTFPPDWSSHHHHH-GFLDQVSDVDSDEDDVDGEDGEDDEDVNSVSDLLS 949
Score = 51 bits (120), Expect = 7e-006
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D+ A IQ+M+ GVKP++ TYT+ I ++A +A EEM+A+G+KP+ Y
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVD 375
L+ +RAS+ E +S +EM G+ D
Sbjct: 804 TLIKG-WARASLPE-----KALSCYEEMKAMGIKPD 833
>sp|Q84J71|PP161_ARATH Pentatricopeptide repeat-containing protein At2g17670
OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1
Length = 463
Score = 59 bits (142), Expect = 2e-008
Identities = 33/99 (33%), Positives = 50/99 (50%)
Frame = -3
Query: 650 ATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMT 471
A ++EMEA G PN TY TL+ G +A L +K + YE MK+ G+K + Y L+
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 470 SLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRW 354
SL+ +AE Y K + +A + T ++W
Sbjct: 414 SLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKW 452
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 57 bits (135), Expect = 1e-007
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D++ A + +EM G+KP+ TY++LI+G+ ++A + YEEM VGL PD+ Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGT 366
L+ + + + + + EMVE G++ D+ T
Sbjct: 525 ALINAYCMEGDLEK------ALQLHNEMVEKGVLPDVVT 557
>sp|Q8GYM2|PP393_ARATH Pentatricopeptide repeat-containing protein At5g18950
OS=Arabidopsis thaliana GN=At5g18950 PE=2 SV=2
Length = 483
Score = 55 bits (131), Expect = 4e-007
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
+ A + + M GV PN TY LIKG+ + + EK L Y+E+KA+GLKP Y L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 476 MTSLLSRASMA 444
+ +L S+A
Sbjct: 465 VRNLKMSDSVA 475
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1
Length = 709
Score = 53 bits (125), Expect = 2e-006
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM R + +M++ G+ PNV T+TTL+ + ++ A+ C EEMK+VGLKP +Y+
Sbjct: 532 DMKR---LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 482 CLMTSLLSR 456
L+ + R
Sbjct: 589 ALINAYAQR 597
Score = 51 bits (120), Expect = 7e-006
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
N A + ++EM+++G+KP+ Y LI +A+ L E+A+N + M + GLKP + L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 476 MTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIE 330
+ + AE + ++ + M E G+ D+ T + L +++
Sbjct: 626 INAFGEDRRDAEAF------AVLQYMKENGVKPDVVTYTTLMKALIRVD 668
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1
Length = 730
Score = 53 bits (125), Expect = 2e-006
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = -3
Query: 650 ATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMT 471
A + + +M G KPNV +YT L+ G+ + ++A N EM A GLKP+ ++CL++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 470 SLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIE 330
+ + E + I +EM G D+ T LC+++
Sbjct: 468 AFCKEHRIPE------AVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 52 bits (124), Expect = 2e-006
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
N+ T +++M++ G+ P+ TY TLI R SL ++A +EEMKA G DK Y+ L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 476 M 474
+
Sbjct: 321 L 321
Score = 52 bits (124), Expect = 2e-006
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = -3
Query: 659 MNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHC 480
++ A + +M G KP+V TYTTL+ G+ RA E A++ +EEM+ G KP+ ++
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 479 LMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGT 366
+ +R E +M I E+ GL D+ T
Sbjct: 425 FIKMYGNRGKFTE------MMKIFDEINVCGLSPDIVT 456
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1
Length = 974
Score = 52 bits (123), Expect = 3e-006
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D++ A ++EM A G +PNV YTTLIK + + S A+ +EMK G+ PD Y+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGL 384
L+ L M E S EMVE GL
Sbjct: 492 SLIIGLSKAKRMDE------ARSFLVEMVENGL 518
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica
GN=Rf1 PE=2 SV=1
Length = 791
Score = 52 bits (122), Expect = 4e-006
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = -3
Query: 629 MEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRAS 450
M IGVKPNV TY TLI G+ A ++A+ M +VGLKP+ Y L+ +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 449 MAEGYIYSGVMSICKEMVEAGLIVDMGT 366
M + + + KEM +G+ D+ T
Sbjct: 562 MEDALV------LFKEMESSGVSPDIIT 583
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 51 bits (121), Expect = 5e-006
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM A + + ++ G +PN+ TY TLIKG+A+A+ EK + YE+M+ G+K ++ +
Sbjct: 399 DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI-- 456
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVD 375
+T+++ + + + + KEM G+ D
Sbjct: 457 --LTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 488
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1
Length = 630
Score = 51 bits (120), Expect = 7e-006
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 617 GVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRASMAEG 438
GVKPNV TYTT++ G+ R L E+A + EMK G PD Y+ L+ + L A
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 437 YIYSGVMSICKEMVEA---GLIVDM 372
M C+ + +A GL+ +M
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNM 615
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,982,208,808
Number of Sequences: 518415
Number of Extensions: 210982208808
Number of Successful Extensions: 1289689628
Number of sequences better than 0.0: 0
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