BLASTX 7.6.2
Query= UN59357 /QuerySize=665
(664 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)... 295 1e-080
TAIR9_protein||AT2G17670.1 | Symbols: | pentatricopeptide (PPR)... 59 2e-009
TAIR9_protein||AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO ... 57 1e-008
TAIR9_protein||AT5G18950.1 | Symbols: | pentatricopeptide (PPR)... 55 3e-008
TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)... 53 2e-007
TAIR9_protein||AT5G64320.1 | Symbols: | pentatricopeptide (PPR)... 53 2e-007
TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)... 52 2e-007
TAIR9_protein||AT5G61990.1 | Symbols: | pentatricopeptide (PPR)... 52 3e-007
TAIR9_protein||AT3G59040.2 | Symbols: | pentatricopeptide (PPR)... 51 5e-007
TAIR9_protein||AT3G59040.1 | Symbols: | pentatricopeptide (PPR)... 51 5e-007
TAIR9_protein||AT1G63130.1 | Symbols: | pentatricopeptide (PPR)... 51 6e-007
TAIR9_protein||AT1G63320.1 | Symbols: | pentatricopeptide (PPR)... 50 8e-007
TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological... 50 1e-006
TAIR9_protein||AT5G12100.1 | Symbols: | pentatricopeptide (PPR)... 49 2e-006
TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)... 48 5e-006
TAIR9_protein||AT5G21222.1 | Symbols: | protein kinase family p... 48 5e-006
>TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:1390049-1393760 FORWARD
Length = 953
Score = 295 bits (755), Expect = 1e-080
Identities = 141/172 (81%), Positives = 160/172 (93%), Gaps = 5/172 (2%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DMNRATQTI+EMEA+GVKPN+KTYTTLIKGWARASLPEKAL+CYEEMKA+G+KPDKAVYH
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIEGSGGELTET 303
CL+TSLLSRAS+AE YIYSGVM+ICKEMVEAGLIVDMGTAV WS+CLCKIE SGGELTET
Sbjct: 839 CLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTET 898
Query: 302 LQKTFPPDWSSHHHHHRSYLDQVSDLDSEDDDVE----DSDDDVDLVSGILS 159
LQKTFPPDWSSHHHHH +LDQVSD+DS++DDV+ + D+DV+ VS +LS
Sbjct: 899 LQKTFPPDWSSHHHHH-GFLDQVSDVDSDEDDVDGEDGEDDEDVNSVSDLLS 949
Score = 51 bits (120), Expect = 6e-007
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D+ A IQ+M+ GVKP++ TYT+ I ++A +A EEM+A+G+KP+ Y
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVD 375
L+ +RAS+ E +S +EM G+ D
Sbjct: 804 TLIKG-WARASLPE-----KALSCYEEMKAMGIKPD 833
>TAIR9_protein||AT2G17670.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:7674420-7675811 FORWARD
Length = 464
Score = 59 bits (142), Expect = 2e-009
Identities = 33/99 (33%), Positives = 50/99 (50%)
Frame = -3
Query: 650 ATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMT 471
A ++EMEA G PN TY TL+ G +A L +K + YE MK+ G+K + Y L+
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 470 SLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRW 354
SL+ +AE Y K + +A + T ++W
Sbjct: 414 SLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKW 452
>TAIR9_protein||AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)
| chr5:15895729-15897972 FORWARD
Length = 748
Score = 57 bits (135), Expect = 1e-008
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D++ A + +EM G+KP+ TY++LI+G+ ++A + YEEM VGL PD+ Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGT 366
L+ + + + + + EMVE G++ D+ T
Sbjct: 525 ALINAYCMEGDLEK------ALQLHNEMVEKGVLPDVVT 557
Score = 49 bits (116), Expect = 2e-006
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
+MNRA + + +M G+ PN +TYTTL+ G+++ +A EM G P Y+
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDM 372
L+ M + +++ ++M E GL D+
Sbjct: 420 ALINGHCVTGKMED------AIAVLEDMKEKGLSPDV 450
>TAIR9_protein||AT5G18950.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:6328519-6329970 REVERSE
Length = 484
Score = 55 bits (131), Expect = 3e-008
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
+ A + + M GV PN TY LIKG+ + + EK L Y+E+KA+GLKP Y L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 476 MTSLLSRASMA 444
+ +L S+A
Sbjct: 465 VRNLKMSDSVA 475
>TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:16915860-16918238 FORWARD
Length = 710
Score = 53 bits (125), Expect = 2e-007
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM R + +M++ G+ PNV T+TTL+ + ++ A+ C EEMK+VGLKP +Y+
Sbjct: 532 DMKR---LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 482 CLMTSLLSR 456
L+ + R
Sbjct: 589 ALINAYAQR 597
Score = 51 bits (120), Expect = 6e-007
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
N A + ++EM+++G+KP+ Y LI +A+ L E+A+N + M + GLKP + L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 476 MTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIE 330
+ + AE + ++ + M E G+ D+ T + L +++
Sbjct: 626 INAFGEDRRDAEAF------AVLQYMKENGVKPDVVTYTTLMKALIRVD 668
>TAIR9_protein||AT5G64320.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:25723247-25725439 REVERSE
Length = 731
Score = 53 bits (125), Expect = 2e-007
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = -3
Query: 650 ATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMT 471
A + + +M G KPNV +YT L+ G+ + ++A N EM A GLKP+ ++CL++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 470 SLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGTAVRWSRCLCKIE 330
+ + E + I +EM G D+ T LC+++
Sbjct: 468 AFCKEHRIPE------AVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
>TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:654102-656561 FORWARD
Length = 820
Score = 52 bits (124), Expect = 2e-007
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -3
Query: 656 NRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCL 477
N+ T +++M++ G+ P+ TY TLI R SL ++A +EEMKA G DK Y+ L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 476 M 474
+
Sbjct: 321 L 321
Score = 52 bits (124), Expect = 2e-007
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = -3
Query: 659 MNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHC 480
++ A + +M G KP+V TYTTL+ G+ RA E A++ +EEM+ G KP+ ++
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 479 LMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVDMGT 366
+ +R E +M I E+ GL D+ T
Sbjct: 425 FIKMYGNRGKFTE------MMKIFDEINVCGLSPDIVT 456
>TAIR9_protein||AT5G61990.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:24900186-24903110 REVERSE
Length = 975
Score = 52 bits (123), Expect = 3e-007
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
D++ A ++EM A G +PNV YTTLIK + + S A+ +EMK G+ PD Y+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGL 384
L+ L M E S EMVE GL
Sbjct: 492 SLIIGLSKAKRMDE------ARSFLVEMVENGL 518
>TAIR9_protein||AT3G59040.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21821495-21823919 REVERSE
Length = 591
Score = 51 bits (121), Expect = 5e-007
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM A + + ++ G +PN+ TY TLIKG+A+A+ EK + YE+M+ G+K ++ +
Sbjct: 406 DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI-- 463
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVD 375
+T+++ + + + + KEM G+ D
Sbjct: 464 --LTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
>TAIR9_protein||AT3G59040.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21821495-21824233 REVERSE
Length = 584
Score = 51 bits (121), Expect = 5e-007
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM A + + ++ G +PN+ TY TLIKG+A+A+ EK + YE+M+ G+K ++ +
Sbjct: 399 DMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI-- 456
Query: 482 CLMTSLLSRASMAEGYIYSGVMSICKEMVEAGLIVD 375
+T+++ + + + + KEM G+ D
Sbjct: 457 --LTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 488
>TAIR9_protein||AT1G63130.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23412854-23414746 FORWARD
Length = 631
Score = 51 bits (120), Expect = 6e-007
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 617 GVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRASMAEG 438
GVKPNV TYTT++ G+ R L E+A + EMK G PD Y+ L+ + L A
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 437 YIYSGVMSICKEMVEA---GLIVDM 372
M C+ + +A GL+ +M
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNM 615
>TAIR9_protein||AT1G63320.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23488884-23489530 REVERSE
Length = 190
Score = 50 bits (119), Expect = 8e-007
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = -3
Query: 617 GVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRASMAEG 438
GVKPNV TYTT+I G+ + E+A + +MK G PD Y+ L+ + L A
Sbjct: 90 GVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 149
Query: 437 YIYSGVMSICKEMVEA---GLIVDM 372
M C+ +A GL+ DM
Sbjct: 150 AELIKEMRSCRFAGDASTYGLVTDM 174
>TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1);
Has 29147 Blast hits to 6292 proteins in 192 species: Archae - 8;
Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants - 25291; Viruses -
0; Other Eukaryotes - 1710 (source: NCBI BLink). |
chr1:23306534-23308423 FORWARD
Length = 630
Score = 50 bits (117), Expect = 1e-006
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = -3
Query: 617 GVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRASMAEG 438
GVKPNV YTT+I G+ R L E+A + EMK G P+ Y+ L+ + L A
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 437 YIYSGVMSICKEMVEAGLIVDMGT 366
+ KEM G + D T
Sbjct: 590 ------AELIKEMRSCGFVGDAST 607
>TAIR9_protein||AT5G12100.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:3911388-3913838 FORWARD
Length = 817
Score = 49 bits (116), Expect = 2e-006
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = -3
Query: 659 MNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHC 480
++ A + E+ G+KP+V TY +LI G+ A ++ + YEEMK G+KP YH
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 479 LMT 471
L++
Sbjct: 640 LIS 642
>TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23385324-23387167 REVERSE
Length = 591
Score = 48 bits (112), Expect = 5e-006
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -3
Query: 617 GVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYHCLMTSLLSRASMAEG 438
GVKPNV TYTT++ G+ R L E+A + EMK G P+ Y+ L+ RA + +G
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI-----RARLRDG 545
Query: 437 YIYSGVMSICKEMVEAGLIVDMGT 366
+ + KEM G D T
Sbjct: 546 -DEAASAELIKEMRSCGFAGDAST 568
>TAIR9_protein||AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 832
Score = 48 bits (112), Expect = 5e-006
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = -3
Query: 662 DMNRATQTIQEMEAIGVKPNVKTYTTLIKGWARASLPEKALNCYEEMKAVGLKPDKAVYH 483
DM R + +M G+ P++ ++ L KG+ARA PEKA +M+ G++P+ +Y
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 482 CLMTSLLSRASM 447
+++ S M
Sbjct: 676 QIISGWCSAGEM 687
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,180,101,359
Number of Sequences: 33410
Number of Extensions: 27180101359
Number of Successful Extensions: 894184999
Number of sequences better than 0.0: 0
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