BLASTX 7.6.2
Query= UN59561 /QuerySize=565
(564 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15242287|ref|NP_197043.1| tRNA/rRNA methyltransferase (SpoU) ... 143 2e-032
gi|297807561|ref|XP_002871664.1| tRNA/rRNA methyltransferase fam... 143 2e-032
gi|34393586|dbj|BAC83213.1| putative rRNA methylase [Oryza sativ... 61 9e-008
gi|218199964|gb|EEC82391.1| hypothetical protein OsI_26737 [Oryz... 61 9e-008
>gi|15242287|ref|NP_197043.1| tRNA/rRNA methyltransferase (SpoU) family protein
[Arabidopsis thaliana]
Length = 350
Score = 143 bits (359), Expect = 2e-032
Identities = 93/148 (62%), Positives = 104/148 (70%), Gaps = 13/148 (8%)
Frame = +3
Query: 120 MNSCKTLFRASLSSSPLVRLPKPNPSITLVSFRAFSSPSSVLRPNPSPHSIGPPRCALHE 299
MNSCK+L RAS+SS P V LP PN SIT +S RAF SP SVL PN S I R H
Sbjct: 1 MNSCKSLIRASISSFPFVPLPNPNFSITFISVRAF-SPLSVLHPNSS--CIVTARRTFHG 57
Query: 300 SASLPALETLTENPPVDLTVSVKELLTTNRNDASSMMKMERRRSSFIGSGGGGDRTRGSS 479
+ +L + E+LTE P D +VK LLTTNR +ASS+MKMERR S S G GD RG S
Sbjct: 58 AVAL-SPESLTEESPKD---TVKGLLTTNRGEASSLMKMERRCSL---SNGEGD-CRG-S 108
Query: 480 WFPYEDRFRCGDDVHLSSREVLEAVSPH 563
WFPYEDRFRCG +VHLSSREVLEAVSPH
Sbjct: 109 WFPYEDRFRCG-EVHLSSREVLEAVSPH 135
>gi|297807561|ref|XP_002871664.1| tRNA/rRNA methyltransferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 350
Score = 143 bits (358), Expect = 2e-032
Identities = 93/149 (62%), Positives = 106/149 (71%), Gaps = 14/149 (9%)
Frame = +3
Query: 120 MNSCKTLFRASLSSSPLVRLPKPNPSIT-LVSFRAFSSPSSVLRPNPSPHSIGPPRCALH 296
MNSCK++ RAS+SS P V LP PN SIT ++ RAF P SVL PNPS IG R H
Sbjct: 1 MNSCKSIIRASISSFPFVPLPNPNSSITFILPVRAF-PPLSVLHPNPS--CIGTARRTFH 57
Query: 297 ESASLPALETLTENPPVDLTVSVKELLTTNRNDASSMMKMERRRSSFIGSGGGGDRTRGS 476
A+L + E+LTE+ P D +VK+LLTTNR DASSMMKMERR S S G GD RG
Sbjct: 58 GVAAL-SPESLTEDSPKD---TVKDLLTTNRGDASSMMKMERRCSL---SDGEGD-CRG- 108
Query: 477 SWFPYEDRFRCGDDVHLSSREVLEAVSPH 563
SWFPYEDRFRC +VHLSSREVLEAV+PH
Sbjct: 109 SWFPYEDRFRCA-EVHLSSREVLEAVTPH 136
>gi|34393586|dbj|BAC83213.1| putative rRNA methylase [Oryza sativa Japonica
Group]
Length = 343
Score = 61 bits (146), Expect = 9e-008
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Frame = +3
Query: 225 SSPSSVLRPNPSPHSIGPPRCALHESASLPALETLTENPPVDLTVSVKELLTTNRNDASS 404
S+ +S+ RP P P PP + S A ++ D +V++LL T +SS
Sbjct: 13 SAFASIPRPRPPP----PPPSRIRASPLSTAAAAASDGDAADGVDTVEQLLVTKPPASSS 68
Query: 405 -----------MMKMERRRSSFIGSGGGGDRTRGSSWFPYEDRFRCGDDVHLSSREVLEA 551
+MK++RR GG G R WFPY D FR V L+SREVLE
Sbjct: 69 SSSAGRGRIDRLMKLQRRADGDFPPGGAGRR-----WFPYLDAFRAAGGVELTSREVLEV 123
Query: 552 VSPH 563
+ PH
Sbjct: 124 LEPH 127
>gi|218199964|gb|EEC82391.1| hypothetical protein OsI_26737 [Oryza sativa Indica
Group]
Length = 343
Score = 61 bits (146), Expect = 9e-008
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Frame = +3
Query: 225 SSPSSVLRPNPSPHSIGPPRCALHESASLPALETLTENPPVDLTVSVKELLTTNRNDASS 404
S+ +S+ RP P P PP + S A ++ D +V++LL T +SS
Sbjct: 13 SAFASIPRPRPPP----PPPSRIRASPLSTAAAAASDGDAADGVDTVEQLLVTKPPASSS 68
Query: 405 -----------MMKMERRRSSFIGSGGGGDRTRGSSWFPYEDRFRCGDDVHLSSREVLEA 551
+MK++RR GG G R WFPY D FR V L+SREVLE
Sbjct: 69 SSSAGRGRIDRLMKLQRRADGDFPPGGAGRR-----WFPYLDAFRAAGGVELTSREVLEV 123
Query: 552 VSPH 563
+ PH
Sbjct: 124 LEPH 127
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,122,805,816
Number of Sequences: 15229318
Number of Extensions: 6079122805816
Number of Successful Extensions: 1432667303
Number of sequences better than 0.0: 0
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