BLASTX 7.6.2
Query= UN59616 /QuerySize=789
(788 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q16G71|MED10_AEDAE Mediator of RNA polymerase II transcriptio... 98 6e-020
sp|Q7Q5R5|MED10_ANOGA Mediator of RNA polymerase II transcriptio... 97 1e-019
sp|Q9GYU7|MED10_DROME Mediator of RNA polymerase II transcriptio... 80 1e-014
sp|Q54GE5|MED10_DICDI Putative mediator of RNA polymerase II tra... 69 3e-011
sp|P45966|MED10_CAEEL Mediator of RNA polymerase II transcriptio... 59 3e-008
sp|Q61Z20|MED10_CAEBR Mediator of RNA polymerase II transcriptio... 57 1e-007
sp|Q4PDA7|MED10_USTMA Mediator of RNA polymerase II transcriptio... 54 1e-006
>sp|Q16G71|MED10_AEDAE Mediator of RNA polymerase II transcription subunit 10
OS=Aedes aegypti GN=MED10 PE=3 SV=1
Length = 130
Score = 98 bits (242), Expect = 6e-020
Identities = 44/123 (35%), Positives = 77/123 (62%)
Frame = +1
Query: 265 LNQVINSIQKTLGLLHQLHLTVSSFTPASQLHLLQRLNSLVSELNSMAKLSEKCNIQVPM 444
L + N ++ + + Q+ + VS F P Q L Q++ SLV+ L + KL + ++ VP+
Sbjct: 5 LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64
Query: 445 EVISLIDDGKNPDEFTRDVINSCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYR 624
EV ID G+NP +T+D I+ + +N+ KGK D+++ + ++++EL+ETFP E+ KY+
Sbjct: 65 EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124
Query: 625 EIR 633
IR
Sbjct: 125 AIR 127
>sp|Q7Q5R5|MED10_ANOGA Mediator of RNA polymerase II transcription subunit 10
OS=Anopheles gambiae GN=MED10 PE=3 SV=2
Length = 130
Score = 97 bits (240), Expect = 1e-019
Identities = 44/123 (35%), Positives = 76/123 (61%)
Frame = +1
Query: 265 LNQVINSIQKTLGLLHQLHLTVSSFTPASQLHLLQRLNSLVSELNSMAKLSEKCNIQVPM 444
L + N ++ + + Q+ + VS F P Q L Q++ SLV+ L + KL + ++ VP+
Sbjct: 5 LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64
Query: 445 EVISLIDDGKNPDEFTRDVINSCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYR 624
EV ID G+NP +T+D I+ + +N+ KGK D+++ + ++++EL ETFP E+ KY+
Sbjct: 65 EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124
Query: 625 EIR 633
IR
Sbjct: 125 AIR 127
>sp|Q9GYU7|MED10_DROME Mediator of RNA polymerase II transcription subunit 10
OS=Drosophila melanogaster GN=MED10 PE=1 SV=1
Length = 133
Score = 80 bits (196), Expect = 1e-014
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 307 LHQLHLTVSSFTPASQLHLLQRLNSLVSELNSMAKL-SEKCNIQVPMEV-ISLIDDGKNP 480
+ Q+ + VS F P Q L Q++NSLV+ L + KL S+ ++ VP EV ID KNP
Sbjct: 19 VRQIRIIVSDFQPQGQNVLNQKINSLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNP 78
Query: 481 DEFTRDVINSCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIRAAS 642
+T+D + +A+N+ KGK + K + ++L EL +TFP+E++ YR R S
Sbjct: 79 QLYTKDCVEKALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYRKDS 132
>sp|Q54GE5|MED10_DICDI Putative mediator of RNA polymerase II transcription
subunit 10 OS=Dictyostelium discoideum GN=med10 PE=3 SV=1
Length = 219
Score = 69 bits (167), Expect = 3e-011
Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 250 DSKENLNQVINSIQKTLGLLHQLHLTVSSFTPASQLHLLQRLNSLVSELNSMAKLSEKCN 429
+ K+ ++ ++++ + L + + V F SQ L +LN +++ + N
Sbjct: 46 NKKQEHLPLLQTVEELVEELRRSLIVVEEFQTPSQQLLFDKLNKIINLYEKIESNRHIVN 105
Query: 430 -IQVPMEVISLIDDGKNPDEFTRDVINSCVARNQVTKGKTDAFKDLRKHILEELEETFPD 606
+++P+E+ +ID KNPD + ++ + +C++ N+ TKGK ++ K+ +K + + E+F
Sbjct: 106 DVEIPLEIFRVIDQSKNPDLYVKETLQNCLSANEKTKGKIESIKNFKKELESHISESFAS 165
Query: 607 EVDKYREIRAASAAEAKRQRN 669
E +Y+ + E + Q+N
Sbjct: 166 EYAEYKLL--TQKKETQEQQN 184
>sp|P45966|MED10_CAEEL Mediator of RNA polymerase II transcription subunit 10
OS=Caenorhabditis elegans GN=mdt-10 PE=2 SV=1
Length = 173
Score = 59 bits (141), Expect = 3e-008
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 331 SSFTPASQLHLLQRLNSLVSELNSMAKLSEK-CNIQVPMEVISLIDDGKNPDEFTRDVIN 507
S+F Q L R+ +LV L + ++ + +VP++++ +DDGKNP +++ +
Sbjct: 66 SNFQTKYQDALNGRIYTLVRGLQDLDRMKGTFSDKKVPLDLLPYLDDGKNPCLYSKHCME 125
Query: 508 SCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIR 633
+ +N+ GK + +K R H+++E E PD V YR IR
Sbjct: 126 KTLEKNKAVNGKIEIYKKFRAHLMKEFSEEMPDLVMYYRSIR 167
>sp|Q61Z20|MED10_CAEBR Mediator of RNA polymerase II transcription subunit 10
OS=Caenorhabditis briggsae GN=mdt-10 PE=3 SV=1
Length = 173
Score = 57 bits (137), Expect = 1e-007
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 331 SSFTPASQLHLLQRLNSLVSELNSMAKLSEK-CNIQVPMEVISLIDDGKNPDEFTRDVIN 507
S+F Q L R+ +L+ L + ++ + VP++++ +DDGKNP +++ +
Sbjct: 70 SNFQTKYQDALNGRIYTLIRGLQDLDRMKGTFSDKNVPLDILPYLDDGKNPLLYSKHCME 129
Query: 508 SCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIR 633
+ +N+ GK + +K R H+++E E PD V +YR+ R
Sbjct: 130 KTLEKNKAVNGKIEMYKKFRAHLIKEFSEEMPDFVIEYRKER 171
>sp|Q4PDA7|MED10_USTMA Mediator of RNA polymerase II transcription subunit 10
OS=Ustilago maydis GN=NUT2 PE=3 SV=1
Length = 197
Score = 54 bits (128), Expect = 1e-006
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +1
Query: 241 ASEDSKENLNQVINSIQKTLGLLHQLHLTVSSFTPASQLHLLQRLNSLVSELNSMAKLSE 420
A+E + NL + S+ + LL+QL + + SQ + ++N + L ++ +
Sbjct: 64 AAEAVRINLETRVRSV---VDLLYQLAVCSADVQEGSQHLVANKVNECIQALAALDATKD 120
Query: 421 ---KCNIQVPMEVISLIDDGKNPDEFTRDVINSCVARNQVTKGKTDAFKDLRKHILEELE 591
+ ++ +P +V+ ++D GKNPD TR+ +N + NQ + G+ A + + + L+
Sbjct: 121 ELHRAHMMIPQDVLEMLDTGKNPDIHTRNFVNRLASENQYSYGQHRAVERYKATLDAALD 180
Query: 592 ETFPD 606
+ FP+
Sbjct: 181 QAFPE 185
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,982,208,808
Number of Sequences: 518415
Number of Extensions: 210982208808
Number of Successful Extensions: 1289689628
Number of sequences better than 0.0: 0
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