BLASTX 7.6.2
Query= UN59616 /QuerySize=789
(788 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G26665.1 | Symbols: | FUNCTIONS IN: molecular... 270 1e-072
TAIR9_protein||AT1G26665.2 | Symbols: | FUNCTIONS IN: molecular... 265 2e-071
TAIR9_protein||AT5G41910.1 | Symbols: | RNA polymerase II media... 230 1e-060
>TAIR9_protein||AT1G26665.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: RNA polymerase II mediator complex protein-related
(TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species:
Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
chr1:9214510-9215426 FORWARD
Length = 190
Score = 270 bits (688), Expect = 1e-072
Identities = 138/171 (80%), Positives = 155/171 (90%), Gaps = 4/171 (2%)
Frame = +1
Query: 157 MDPAQNASAAGIGGSNGTTA-MGYDGTA--TASEDSKENLNQVINSIQKTLGLLHQLHLT 327
MDP QN S AGIGGSNGT DGT+ T ++DSKENL+QVINSI+KTLG+LHQLHLT
Sbjct: 1 MDPTQNTS-AGIGGSNGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQLHLT 59
Query: 328 VSSFTPASQLHLLQRLNSLVSELNSMAKLSEKCNIQVPMEVISLIDDGKNPDEFTRDVIN 507
V+SFTPASQLHLLQRLNSLV EL++M KLSEKCNIQ+PMEV++LIDDGKNPDEFT+DV+N
Sbjct: 60 VTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKDVLN 119
Query: 508 SCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIRAASAAEAKR 660
SC+ARNQVTKGKTDAFKDLRKHILEELE+ FPDEVD YREIRA+SAAEAKR
Sbjct: 120 SCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKR 170
>TAIR9_protein||AT1G26665.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: RNA polymerase II mediator complex protein-related
(TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species:
Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
chr1:9214510-9215426 FORWARD
Length = 190
Score = 265 bits (677), Expect = 2e-071
Identities = 136/171 (79%), Positives = 153/171 (89%), Gaps = 4/171 (2%)
Frame = +1
Query: 157 MDPAQNASAAGIGGSNGTTA-MGYDGTA--TASEDSKENLNQVINSIQKTLGLLHQLHLT 327
MDP QN S AGIGGSNGT DGT+ T ++DSKENL+QVINSI+KTLG+LHQLHLT
Sbjct: 1 MDPTQNTS-AGIGGSNGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQLHLT 59
Query: 328 VSSFTPASQLHLLQRLNSLVSELNSMAKLSEKCNIQVPMEVISLIDDGKNPDEFTRDVIN 507
V+SFTPASQLHLLQRLNSLV EL++M KLSEKCNIQ+PMEV++LIDDGKNPDEFT+DV+N
Sbjct: 60 VTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKDVLN 119
Query: 508 SCVARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIRAASAAEAKR 660
SC+ARNQVTKGKTDAFKDLRKHILEELE+ FPDEVD YREIRA+SAA KR
Sbjct: 120 SCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKR 170
>TAIR9_protein||AT5G41910.1 | Symbols: | RNA polymerase II mediator complex
protein-related | chr5:16778160-16779032 REVERSE
Length = 187
Score = 230 bits (584), Expect = 1e-060
Identities = 120/168 (71%), Positives = 142/168 (84%), Gaps = 3/168 (1%)
Frame = +1
Query: 160 DPAQNASAAGIGGSNGTTAMGYDGTATASEDSKENLNQVINSIQKTLGLLHQLHLTVSSF 339
D QN + AGIG NG+ + AT +DS E LNQ+INS QK L LLHQL LTVSSF
Sbjct: 2 DQTQN-TIAGIGEINGSIKTEINAIATV-DDSNEKLNQIINSNQKILELLHQLKLTVSSF 59
Query: 340 TPASQLHLLQRLNSLVSELNSMAKLSEKCNIQVPMEVISLIDDGKNPDEFTRDVIN-SCV 516
TPASQLHLLQRLNSLV EL++MAKLS+KCNIQVP+EV++LIDDGKNPDEFT+DV+N +C+
Sbjct: 60 TPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNKNCI 119
Query: 517 ARNQVTKGKTDAFKDLRKHILEELEETFPDEVDKYREIRAASAAEAKR 660
A+NQVTKGK+DAFK LRKH+LEELE+ FPDEVD+YR+IRA+ AAEAKR
Sbjct: 120 AKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKR 167
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,314,335,801
Number of Sequences: 33410
Number of Extensions: 27314335801
Number of Successful Extensions: 899824616
Number of sequences better than 0.0: 0
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