BLASTX 7.6.2
Query= UN59733 /QuerySize=730
(729 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular... 319 2e-087
TAIR9_protein||AT1G19290.1 | Symbols: | LOCATED IN: mitochondri... 73 1e-013
TAIR9_protein||AT4G26680.1 | Symbols: | pentatricopeptide (PPR)... 72 3e-013
TAIR9_protein||AT4G13885.1 | Symbols: | 3'-5' exonuclease-relat... 69 3e-012
TAIR9_protein||AT1G09820.1 | Symbols: | pentatricopeptide (PPR)... 58 5e-009
>TAIR9_protein||AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 18933 Blast hits to 5737 proteins in
174 species: Archae - 4; Bacteria - 8; Metazoa - 352; Fungi - 335;
Plants - 17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 611
Score = 319 bits (815), Expect = 2e-087
Identities = 160/219 (73%), Positives = 182/219 (83%), Gaps = 4/219 (1%)
Frame = +3
Query: 81 SSSSLQLIPRCDDPPKPILLNPLYNLLPNTQNPNRIVDVICSSLN-QQRDFLPSNLHNSV 257
SS S ++PRC + PKPI LNPLYNLLP +QNP++IVDVICS+LN L NL + V
Sbjct: 12 SSYSSSIVPRCSNIPKPI-LNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEV 70
Query: 258 KSLIPHLGHREISRALLRFQSDATRALSFFNWVKSDSGLTPNVGNYCLLLHVLAWSKKFP 437
KSLIPHLG+ EISR LLRFQSDA+RA++FF WVK D G PNVGNYCLLLH+L SKKFP
Sbjct: 71 KSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFP 130
Query: 438 LAMQFLCELIELLAKEE--DVFSVLVSATEECNWDPVVFDMLVKAYLKLGLVEEGYSVFR 611
LAMQFLCELIEL +K+E DVF VLVSAT+ECNWDPVVFDMLVK YLKLGLVEEG+ VFR
Sbjct: 131 LAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFR 190
Query: 612 KVIAFGFRVSVVTCNHLLNGLLKLDLTDDCWRVYQVVCR 728
+V+ GF VSVVTCNHLLNGLLKLDL +DCW+VY V+CR
Sbjct: 191 EVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCR 229
>TAIR9_protein||AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED
IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT5G55840.1); Has 31003 Blast hits to
6161 proteins in 194 species: Archae - 6; Bacteria - 22; Metazoa - 935;
Fungi - 736; Plants - 27904; Viruses - 0; Other Eukaryotes - 1400
(source: NCBI BLink). | chr1:6666249-6668963 FORWARD
Length = 905
Score = 73 bits (178), Expect = 1e-013
Identities = 38/130 (29%), Positives = 68/130 (52%)
Frame = +3
Query: 291 ISRALLRFQSDATRALSFFNWVKSDSGLTPNVGNYCLLLHVLAWSKKFPLAMQFLCELIE 470
++ L R + + L FN P+ YC ++H+L+ ++ + +LCEL+
Sbjct: 73 LNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVA 132
Query: 471 LLAKEEDVFSVLVSATEECNWDPVVFDMLVKAYLKLGLVEEGYSVFRKVIAFGFRVSVVT 650
L V+ LV +E ++ P VFDM++K Y + GLV+ VF + +G S+++
Sbjct: 133 LNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLS 192
Query: 651 CNHLLNGLLK 680
CN LL+ L++
Sbjct: 193 CNSLLSNLVR 202
>TAIR9_protein||AT4G26680.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:13454853-13456418 FORWARD
Length = 522
Score = 72 bits (175), Expect = 3e-013
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Frame = +3
Query: 249 NSVKSLIPHLGHREISRALLRFQSDATRALSFFNWVKSDSGLTPNVGNYCLLLHVLAWSK 428
+ + L HL + LL+ Q D +L FFNW K+ + + ++ + ++LH L ++
Sbjct: 70 DKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNR 129
Query: 429 KFPLAMQFLCEL-----IELLAKEEDVFSVLVSATEECNWDPVVFDMLVKAYLKLGLVEE 593
KF A L ++ ++L AK VF L+ + EC+ P VFD L K + L
Sbjct: 130 KFKSAESILRDVLVNGGVDLPAK---VFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRN 186
Query: 594 GYSVFRKVIAFGFRVSVVTCNHLLNGLLKLDLTDDCWRVYQ 716
F ++ +GF +V +CN ++ LL D R Y+
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
>TAIR9_protein||AT4G13885.1 | Symbols: | 3'-5' exonuclease-related |
chr4:8028911-8030754 REVERSE
Length = 264
Score = 69 bits (166), Expect = 3e-012
Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Frame = +3
Query: 282 HREISRALLRFQSDATRALSFFNWVKSDSGLTP--NVGNYCLLLHVLAWSKKFPLAMQFL 455
H E R LL +D SF L P +VGNYCLLLH+L SKKF LAMQFL
Sbjct: 76 HSETLRCLLPKLTDQPIGSSFLL-------LRPFRDVGNYCLLLHILPSSKKFTLAMQFL 128
Query: 456 CELIELLAK-EEDVFSVLVSATEE 524
CELI+ +K EEDVF VLV A++E
Sbjct: 129 CELIDSTSKEEEDVFRVLVYASDE 152
>TAIR9_protein||AT1G09820.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:3190594-3192414 REVERSE
Length = 607
Score = 58 bits (139), Expect = 5e-009
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Frame = +3
Query: 267 IPHLGHREISRALLRFQSDATRALSFFNWVKSDSGLTPNVGNYCLLLHVLAWSKKFPLAM 446
+ + E+ R L+ + D L +++W+ +S ++ ++ LLH LA +K++
Sbjct: 62 VTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIR 121
Query: 447 QFLCELIELLAKEEDVFSVL--VSATEECNWDPVVFDMLVKAYLKLGLVEEGYSVFRKVI 620
FL + + V S+ +S + + ++ DMLV AY E G+ F++
Sbjct: 122 SFLDGFVR-NGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180
Query: 621 AFGFRVSVVTCNHLLNGLLKLDLTDDCWRVYQVVCR 728
+G+++S ++C L+ LLK + + D VY+ + R
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,247,013
Number of Sequences: 33410
Number of Extensions: 27357247013
Number of Successful Extensions: 899867250
Number of sequences better than 0.0: 0
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