BLASTX 7.6.2
Query= UN59734 /QuerySize=782
(781 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G18470.1 | Symbols: | zinc finger (C3HC4-type... 321 3e-088
TAIR9_protein||AT1G18470.2 | Symbols: | zinc finger (C3HC4-type... 321 3e-088
TAIR9_protein||AT1G73950.1 | Symbols: | zinc finger (C3HC4-type... 279 2e-075
TAIR9_protein||AT1G68820.1 | Symbols: | membrane protein, putat... 243 9e-065
>TAIR9_protein||AT1G18470.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6356407-6360057 REVERSE
Length = 468
Score = 321 bits (822), Expect = 3e-088
Identities = 151/167 (90%), Positives = 159/167 (95%)
Frame = +1
Query: 211 MSCRRVLKSIQALSAHTLLFCFTLFLVLKLDHTLSSSWWMVFLPLWGFHAVVARGRFSLP 390
MSCRRVLKSIQAL+AH+LLFCFTL LVLKLDHT+SSSWWMVF PLW FHAVVARGRFSLP
Sbjct: 1 MSCRRVLKSIQALAAHSLLFCFTLLLVLKLDHTVSSSWWMVFFPLWAFHAVVARGRFSLP 60
Query: 391 APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYGSWPPAVSLKVASLPLLAFEVTI 570
APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSY WPPAVSLK+A LPLLAFE+TI
Sbjct: 61 APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYARWPPAVSLKIAFLPLLAFELTI 120
Query: 571 LIDNLRMCRALMPGDDDSTNDEAIWEALPHFWVAVSMVFTLAATFFT 711
L+DNLRMCRALMPGDDDS D+AIWEALPHFWVA+SMVFTLAATFFT
Sbjct: 121 LVDNLRMCRALMPGDDDSITDDAIWEALPHFWVAISMVFTLAATFFT 167
>TAIR9_protein||AT1G18470.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6356972-6360057 REVERSE
Length = 424
Score = 321 bits (822), Expect = 3e-088
Identities = 151/167 (90%), Positives = 159/167 (95%)
Frame = +1
Query: 211 MSCRRVLKSIQALSAHTLLFCFTLFLVLKLDHTLSSSWWMVFLPLWGFHAVVARGRFSLP 390
MSCRRVLKSIQAL+AH+LLFCFTL LVLKLDHT+SSSWWMVF PLW FHAVVARGRFSLP
Sbjct: 1 MSCRRVLKSIQALAAHSLLFCFTLLLVLKLDHTVSSSWWMVFFPLWAFHAVVARGRFSLP 60
Query: 391 APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYGSWPPAVSLKVASLPLLAFEVTI 570
APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSY WPPAVSLK+A LPLLAFE+TI
Sbjct: 61 APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYARWPPAVSLKIAFLPLLAFELTI 120
Query: 571 LIDNLRMCRALMPGDDDSTNDEAIWEALPHFWVAVSMVFTLAATFFT 711
L+DNLRMCRALMPGDDDS D+AIWEALPHFWVA+SMVFTLAATFFT
Sbjct: 121 LVDNLRMCRALMPGDDDSITDDAIWEALPHFWVAISMVFTLAATFFT 167
>TAIR9_protein||AT1G73950.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27800126-27804476 REVERSE
Length = 467
Score = 279 bits (712), Expect = 2e-075
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +1
Query: 211 MSCRRVLKSIQALSAHTLLFCFTLFLVLKLDHTLSSSWWMVFLPLWGFHAVVARGRFSLP 390
M+C RVLKS+QA AH LF FTL LVLKLDH+++ SWW+V LPLW FHAVVARGRFSLP
Sbjct: 1 MNCWRVLKSVQASVAHCFLFSFTLALVLKLDHSITYSWWVVCLPLWAFHAVVARGRFSLP 60
Query: 391 APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYGSWPPAVSLKVASLPLLAFEVTI 570
AP+APRNRHWAPCHA+V+TPLL+AFELLLC+YLE++Y PPAVSLK+ LPLLAFEV I
Sbjct: 61 APIAPRNRHWAPCHAIVSTPLLIAFELLLCVYLETAYADSPPAVSLKIVFLPLLAFEVII 120
Query: 571 LIDNLRMCRALMPGDDDSTNDEAIWEALPHFWVAVSMVFTLAATFFT 711
L+DN RMCRALMPGD++S NDEA+WEALPHFWVA+SMVF LAAT FT
Sbjct: 121 LVDNARMCRALMPGDEESVNDEAVWEALPHFWVAISMVFFLAATVFT 167
>TAIR9_protein||AT1G68820.1 | Symbols: | membrane protein, putative |
chr1:25865852-25868800 FORWARD
Length = 469
Score = 243 bits (620), Expect = 9e-065
Identities = 116/168 (69%), Positives = 134/168 (79%), Gaps = 5/168 (2%)
Frame = +1
Query: 208 IMSCRRVLKSIQALSAHTLLFCFTLFLVLKLDHTLSSSWWMVFLPLWGFHAVVARGRFSL 387
+MS RRV KS QA SAH LLF FTL L LKLDH +S SWW VF PLW FHAV+ARGRFSL
Sbjct: 7 VMSWRRVWKSFQAASAHCLLFSFTLLLALKLDHVVSHSWWFVFAPLWLFHAVIARGRFSL 66
Query: 388 PAPVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYGSWPPAVSLKVASLPLLAFEVT 567
PAP P +RHWAP H+V+ATPLLVAFE+LLC++LE Y V LK+ LPLLAFEV
Sbjct: 67 PAPSMPHDRHWAPFHSVMATPLLVAFEILLCVHLEDKY-----VVDLKIVFLPLLAFEVA 121
Query: 568 ILIDNLRMCRALMPGDDDSTNDEAIWEALPHFWVAVSMVFTLAATFFT 711
ILIDN+RMCR LMPGD+++ +DEAIWE LPHFWV++SMVF +AAT FT
Sbjct: 122 ILIDNVRMCRTLMPGDEETMSDEAIWETLPHFWVSISMVFFIAATTFT 169
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,247,013
Number of Sequences: 33410
Number of Extensions: 27357247013
Number of Successful Extensions: 899867250
Number of sequences better than 0.0: 0
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