BLASTX 7.6.2
Query= UN59751 /QuerySize=798
(797 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G01220.1 | Symbols: | FUNCTIONS IN: molecular... 323 1e-088
TAIR9_protein||AT4G01220.2 | Symbols: | FUNCTIONS IN: molecular... 323 1e-088
TAIR9_protein||AT4G01770.1 | Symbols: RGXT1 | RGXT1 (rhamnogalac... 268 3e-072
TAIR9_protein||AT4G01750.1 | Symbols: RGXT2 | RGXT2 (rhamnogalac... 268 3e-072
TAIR9_protein||AT1G56550.1 | Symbols: | UDP-xylosyltransferase ... 251 4e-067
>TAIR9_protein||AT4G01220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1
(rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase
(TAIR:AT4G01770.1); Has 188 Blast hits to 185 proteins in 17 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 165; Viruses
- 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr4:513431-515648
REVERSE
Length = 361
Score = 323 bits (826), Expect = 1e-088
Identities = 171/220 (77%), Positives = 181/220 (82%), Gaps = 8/220 (3%)
Frame = +3
Query: 153 MAQQQFLHQRPIK----NPFSSSPLSNSSLSNRPISLLSRNGLLLLLALLVILGVFLPWA 320
MAQQ+FLHQRPI+ NPFSSSPLS SS+SNRPISLLSRNGLLLLLALLVILGVFLPWA
Sbjct: 1 MAQQKFLHQRPIQNPFTNPFSSSPLSTSSISNRPISLLSRNGLLLLLALLVILGVFLPWA 60
Query: 321 GSPLFPFPNTFSSSSHSKWRDYSLAQAVSFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 500
GSPLFP PN S S SKWRDYSL QAV FVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ
Sbjct: 61 GSPLFPSPNKL-SPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 119
Query: 501 NHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRSRSICCK 680
HQD+VLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFT+R +
Sbjct: 120 KHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLE 179
Query: 681 LWS-*VTVYVHDVDMVWLQDPFTI--WRDMMLLRDDVTAI 791
+ V +DVDMVWLQDPF + DD+TAI
Sbjct: 180 ILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAI 219
>TAIR9_protein||AT4G01220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RGXT1
(rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase
(TAIR:AT4G01770.1); Has 153 Blast hits to 150 proteins in 16 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses
- 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr4:514146-515648
REVERSE
Length = 300
Score = 323 bits (826), Expect = 1e-088
Identities = 171/220 (77%), Positives = 181/220 (82%), Gaps = 8/220 (3%)
Frame = +3
Query: 153 MAQQQFLHQRPIK----NPFSSSPLSNSSLSNRPISLLSRNGLLLLLALLVILGVFLPWA 320
MAQQ+FLHQRPI+ NPFSSSPLS SS+SNRPISLLSRNGLLLLLALLVILGVFLPWA
Sbjct: 1 MAQQKFLHQRPIQNPFTNPFSSSPLSTSSISNRPISLLSRNGLLLLLALLVILGVFLPWA 60
Query: 321 GSPLFPFPNTFSSSSHSKWRDYSLAQAVSFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 500
GSPLFP PN S S SKWRDYSL QAV FVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ
Sbjct: 61 GSPLFPSPNKL-SPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQ 119
Query: 501 NHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTSRSRSICCK 680
HQD+VLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFT+R +
Sbjct: 120 KHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLE 179
Query: 681 LWS-*VTVYVHDVDMVWLQDPFTI--WRDMMLLRDDVTAI 791
+ V +DVDMVWLQDPF + DD+TAI
Sbjct: 180 ILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAI 219
>TAIR9_protein||AT4G01770.1 | Symbols: RGXT1 | RGXT1 (rhamnogalacturonan
xylosyltransferase 1); UDP-xylosyltransferase | chr4:764564-766596
FORWARD
Length = 362
Score = 268 bits (685), Expect = 3e-072
Identities = 142/191 (74%), Positives = 156/191 (81%), Gaps = 6/191 (3%)
Frame = +3
Query: 189 KNPFSSSPLSNSSLSNRPISLLSRNG-LLLLLALLVILGVFLPWAGSPLFPFPNTFSS-- 359
++ FSSSP S SS+S+RPISLLSRNG LLLLLAL+++LGV LPW GSPLF FPN SS
Sbjct: 10 QSTFSSSPSSYSSISDRPISLLSRNGLLLLLLALVLLLGVLLPWPGSPLFLFPNRLSSSL 69
Query: 360 --SSHSKWRDYSLAQAVSFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQNHQDKVLVIAE 533
S SKWRDY+LAQA FVAKNGTVIVCAVS P+LPFLNNWLISVSRQ HQDKVLVIAE
Sbjct: 70 SPSPQSKWRDYTLAQAARFVAKNGTVIVCAVSSPFLPFLNNWLISVSRQKHQDKVLVIAE 129
Query: 534 DYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTS-RSRSICCKLWS*VTVYVH 710
DY TLYKVNEKWPGHAVLIPPALDS+TA FGSQGFFNFT+ R + + L V +
Sbjct: 130 DYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYN 189
Query: 711 DVDMVWLQDPF 743
DVDMVWLQDPF
Sbjct: 190 DVDMVWLQDPF 200
>TAIR9_protein||AT4G01750.1 | Symbols: RGXT2 | RGXT2 (rhamnogalacturonan
xylosyltransferase 2); UDP-xylosyltransferase | chr4:756534-758364
FORWARD
Length = 368
Score = 268 bits (684), Expect = 3e-072
Identities = 147/209 (70%), Positives = 163/209 (77%), Gaps = 15/209 (7%)
Frame = +3
Query: 153 MAQ-QQFLHQRPIKNPFSSSPLSNSSLSNRPISLLSRNGLLL-LLALLVILGVFLPWAGS 326
MAQ QQ LHQ + PFSSSP S SS+SNRPI LLSRNGLLL LLAL ++LGVFLPW GS
Sbjct: 1 MAQKQQTLHQ---QRPFSSSPRSYSSISNRPIFLLSRNGLLLVLLALFLLLGVFLPWPGS 57
Query: 327 PLFPFPNTFSSSSH---------SKWRDYSLAQAVSFVAKNGTVIVCAVSYPYLPFLNNW 479
PL FPN SS S+ S+WR+Y+LAQA FVA NGTVIVCAVS P+LPFLNNW
Sbjct: 58 PLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVCAVSSPFLPFLNNW 117
Query: 480 LISVSRQNHQDKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTS- 656
LISVSRQ HQ+KVLVIAEDY TLYKVNEKWPGHAVLIPPALDS+TA+ FGSQGFFNFT+
Sbjct: 118 LISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAYSFGSQGFFNFTAR 177
Query: 657 RSRSICCKLWS*VTVYVHDVDMVWLQDPF 743
R + + L V +DVDMVWLQDPF
Sbjct: 178 RPQHLLQILELGYNVMYNDVDMVWLQDPF 206
>TAIR9_protein||AT1G56550.1 | Symbols: | UDP-xylosyltransferase |
chr1:21185836-21188070 REVERSE
Length = 384
Score = 251 bits (640), Expect = 4e-067
Identities = 137/186 (73%), Positives = 146/186 (78%), Gaps = 10/186 (5%)
Frame = +3
Query: 216 SNSSLSNRPISLLSRNG--LLLLLALLVILGVFLPWAGSPLFPFPNTFSSS-------SH 368
S +SNR ISLL+RNG LLLLLAL VILGVFLP S LF FPNT SSS S
Sbjct: 5 SQRPISNRHISLLNRNGLILLLLLALFVILGVFLPLTKSSLFMFPNTTSSSLSPSSSLSV 64
Query: 369 SKWRDYSLAQAVSFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQNHQDKVLVIAEDYATL 548
S WRDYSLAQAV FVAKN TVIVCAVSYP+LPFLNNWLIS+SRQ HQ+KVLVIAEDYATL
Sbjct: 65 SDWRDYSLAQAVKFVAKNETVIVCAVSYPFLPFLNNWLISISRQKHQEKVLVIAEDYATL 124
Query: 549 YKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTS-RSRSICCKLWS*VTVYVHDVDMV 725
YKVNEKWPGHAVLIPPALD Q+AHKFGSQGFFN TS R + + L V +DVDMV
Sbjct: 125 YKVNEKWPGHAVLIPPALDPQSAHKFGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMV 184
Query: 726 WLQDPF 743
WLQDPF
Sbjct: 185 WLQDPF 190
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,247,013
Number of Sequences: 33410
Number of Extensions: 27357247013
Number of Successful Extensions: 899867250
Number of sequences better than 0.0: 0
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