BLASTX 7.6.2
Query= UN59834 /QuerySize=283
(282 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53570.1 | Symbols: | RabGAP/TBC domain-conta... 117 2e-027
TAIR9_protein||AT5G53570.2 | Symbols: | RabGAP/TBC domain-conta... 117 2e-027
TAIR9_protein||AT5G24390.1 | Symbols: | RabGAP/TBC domain-conta... 62 4e-011
TAIR9_protein||AT5G41940.1 | Symbols: | RabGAP/TBC domain-conta... 61 1e-010
TAIR9_protein||AT3G49350.1 | Symbols: | RAB GTPase activator | ... 58 1e-009
>TAIR9_protein||AT5G53570.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:21760924-21763082 REVERSE
Length = 551
Score = 117 bits (292), Expect = 2e-027
Identities = 68/96 (70%), Positives = 77/96 (80%), Gaps = 6/96 (6%)
Frame = +3
Query: 3 NEDVQLLPSFVYSSDEKKPEEEN-NNSCGENTS--PSPSPEIQVEVTVHEDFSTWQRIIR 173
NEDV LL SF + SDEKKPEE+N NN+ EN+S + + E+QVEV VHEDFSTWQRIIR
Sbjct: 231 NEDVLLLSSFAH-SDEKKPEEDNSNNNSEENSSLLVAAASEVQVEVAVHEDFSTWQRIIR 289
Query: 174 LDALRADSDWATYSSSSSSTAITETKARCLAESVGL 281
LDALRADS+WA Y S STAITE+KAR LAESVGL
Sbjct: 290 LDALRADSEWANY--SPYSTAITESKARRLAESVGL 323
>TAIR9_protein||AT5G53570.2 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:21760924-21763280 REVERSE
Length = 578
Score = 117 bits (292), Expect = 2e-027
Identities = 68/96 (70%), Positives = 77/96 (80%), Gaps = 6/96 (6%)
Frame = +3
Query: 3 NEDVQLLPSFVYSSDEKKPEEEN-NNSCGENTS--PSPSPEIQVEVTVHEDFSTWQRIIR 173
NEDV LL SF + SDEKKPEE+N NN+ EN+S + + E+QVEV VHEDFSTWQRIIR
Sbjct: 258 NEDVLLLSSFAH-SDEKKPEEDNSNNNSEENSSLLVAAASEVQVEVAVHEDFSTWQRIIR 316
Query: 174 LDALRADSDWATYSSSSSSTAITETKARCLAESVGL 281
LDALRADS+WA Y S STAITE+KAR LAESVGL
Sbjct: 317 LDALRADSEWANY--SPYSTAITESKARRLAESVGL 350
>TAIR9_protein||AT5G24390.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:8327004-8329238 REVERSE
Length = 529
Score = 62 bits (150), Expect = 4e-011
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Frame = +3
Query: 39 SSDEKKPEEEN----NNSCGENTSPSPSPEIQVEVTVHEDFSTWQRIIRLDALRADSDWA 206
SSD +E + SC S SP EDF TWQRIIRLDALRAD++W
Sbjct: 220 SSDSDSSDENDYVQVAPSCEGKDENSTSPSSIYISRTKEDFVTWQRIIRLDALRADTEWT 279
Query: 207 TYSSSSSSTAITETKARCLAESVGL 281
YS S + ++E +AR AE+VGL
Sbjct: 280 PYSQSQA--LVSENRARRAAEAVGL 302
>TAIR9_protein||AT5G41940.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:16782039-16785451 FORWARD
Length = 550
Score = 61 bits (146), Expect = 1e-010
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Frame = +3
Query: 36 YSSDEKKPEEENNNSCGENTSPSPSPEIQVEVTVHEDF-STWQRIIRLDALRADSDWATY 212
+ ++E+ N E +SPS P+ Q EDF STWQRIIRLDA+RA+ +W Y
Sbjct: 253 FLANEEVESHNTVNQEKEISSPSSKPKSQ---AADEDFMSTWQRIIRLDAVRANDEWVPY 309
Query: 213 SSSSSSTAITETKARCLAESVGL 281
S + + A++ETKAR +A VGL
Sbjct: 310 SPTQA--AVSETKARGIAIQVGL 330
>TAIR9_protein||AT3G49350.1 | Symbols: | RAB GTPase activator |
chr3:18297663-18299846 REVERSE
Length = 540
Score = 58 bits (138), Expect = 1e-009
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +3
Query: 39 SSDEKKPEEENNNSCGENTSPSPSPEIQVEVTVHEDFSTWQRIIRLDALRADSDWATYSS 218
SSDE + + +S + + S P EDF TWQRIIRLDA+RADS+W +YS
Sbjct: 238 SSDESEVVQVFQSSATPDVN-STYPASSSIPRTEEDFVTWQRIIRLDAVRADSEWTSYSP 296
Query: 219 SSSSTAITETKARCLAESVGL 281
S + I+E +A AE+VGL
Sbjct: 297 SQA--VISEDRACRAAEAVGL 315
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,247,013
Number of Sequences: 33410
Number of Extensions: 27357247013
Number of Successful Extensions: 899867250
Number of sequences better than 0.0: 0
|
