BLASTX 7.6.2
Query= UN59838 /QuerySize=641
(640 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32650.1 | Symbols: | FUNCTIONS IN: molecular... 250 9e-067
TAIR9_protein||AT2G32650.2 | Symbols: | FUNCTIONS IN: molecular... 250 9e-067
TAIR9_protein||AT2G32180.1 | Symbols: PTAC18 | PTAC18 (PLASTID T... 248 2e-066
TAIR9_protein||AT2G27402.1 | Symbols: | FUNCTIONS IN: molecular... 66 1e-011
TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular... 63 2e-010
TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular... 60 8e-010
>TAIR9_protein||AT2G32650.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown
function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll
fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has
169 Blast hits to 169 proteins in 46 species: Archae - 0; Bacteria -
71; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes
- 17 (source: NCBI BLink). | chr2:13851547-13851966 FORWARD
Length = 140
Score = 250 bits (636), Expect = 9e-067
Identities = 123/141 (87%), Positives = 128/141 (90%), Gaps = 3/141 (2%)
Frame = +1
Query: 127 MASLIMATPFPAYSLTQSKKMNKVSVQRAFKVTSMQT--PLEELYNVKVERKVSQRRLEE 300
MASLIM TPFP S+T KK N +SVQRAFKVT MQT PLEELYNVKVERKVSQ+RLEE
Sbjct: 1 MASLIMTTPFPG-SVTACKKTNNLSVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEE 59
Query: 301 LGVSKWSVWKTVKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 480
LGVS+WSVWKT KCKLPWDWQVDQLVYIE+GEVRVVPEGSKRYMQFLAGDLVRYPKWLEA
Sbjct: 60 LGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 119
Query: 481 DLFFNAPYRERYCFKAYGDD* 543
DLFFNAPY ERYCFKAYGDD*
Sbjct: 120 DLFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G32650.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown
function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll
fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has
169 Blast hits to 169 proteins in 46 species: Archae - 0; Bacteria -
71; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes
- 17 (source: NCBI BLink). | chr2:13851547-13851966 FORWARD
Length = 140
Score = 250 bits (636), Expect = 9e-067
Identities = 123/141 (87%), Positives = 128/141 (90%), Gaps = 3/141 (2%)
Frame = +1
Query: 127 MASLIMATPFPAYSLTQSKKMNKVSVQRAFKVTSMQT--PLEELYNVKVERKVSQRRLEE 300
MASLIM TPFP S+T KK N +SVQRAFKVT MQT PLEELYNVKVERKVSQ+RLEE
Sbjct: 1 MASLIMTTPFPG-SVTACKKTNNLSVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEE 59
Query: 301 LGVSKWSVWKTVKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 480
LGVS+WSVWKT KCKLPWDWQVDQLVYIE+GEVRVVPEGSKRYMQFLAGDLVRYPKWLEA
Sbjct: 60 LGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 119
Query: 481 DLFFNAPYRERYCFKAYGDD* 543
DLFFNAPY ERYCFKAYGDD*
Sbjct: 120 DLFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G32180.1 | Symbols: PTAC18 | PTAC18 (PLASTID
TRANSCRIPTIONALLY ACTIVE 18) | chr2:13672362-13672781 REVERSE
Length = 140
Score = 248 bits (633), Expect = 2e-066
Identities = 122/141 (86%), Positives = 128/141 (90%), Gaps = 3/141 (2%)
Frame = +1
Query: 127 MASLIMATPFPAYSLTQSKKMNKVSVQRAFKVTSMQT--PLEELYNVKVERKVSQRRLEE 300
MASLIM TPFP S+T KK N +SVQRAF+VT MQT PLEELYNVKVERKVSQ+RLEE
Sbjct: 1 MASLIMTTPFPG-SVTTCKKTNNLSVQRAFRVTCMQTEKPLEELYNVKVERKVSQKRLEE 59
Query: 301 LGVSKWSVWKTVKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 480
LGVS+WSVWKT KCKLPWDWQVDQLVYIE+GEVRVVPEGSKRYMQFLAGDLVRYPKWLEA
Sbjct: 60 LGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEA 119
Query: 481 DLFFNAPYRERYCFKAYGDD* 543
DLFFNAPY ERYCFKAYGDD*
Sbjct: 120 DLFFNAPYIERYCFKAYGDD* 140
>TAIR9_protein||AT2G27402.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) (TAIR:AT2G32180.1); Has 15
Blast hits to 15 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:11724031-11724189 FORWARD
Length = 53
Score = 66 bits (160), Expect = 1e-011
Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Frame = +1
Query: 142 MATPFPAYSLTQSKKMNKVSVQRAFKVTSMQT--PLEELYNVKVERKVSQRRL 294
M T FP S+T KK N +SVQRAF+VT MQT PLEELYNVKVERKVS++RL
Sbjct: 1 MTTSFPG-SVTTCKKTNNLSVQRAFRVTCMQTEKPLEELYNVKVERKVSKKRL 52
>TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10280.1); Has 242 Blast hits to 242 proteins
in 52 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). |
chr4:6379958-6381720 REVERSE
Length = 121
Score = 63 bits (151), Expect = 2e-010
Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +1
Query: 247 ELYNVKVERKVSQRRLEELGVSKWSVWKTVKCKLPWDWQVDQLVYIEEGEVRVVPEGSKR 426
E++ VKV R+ S +L ELGV+ W +W+++ K PW ++ + +Y EG+++V E +
Sbjct: 16 EIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHK 75
Query: 427 ---YMQFLAGDLVRYPKWLEADLFFNAPYRERY 516
++F+AGDLV +P+ + + ++RY
Sbjct: 76 EGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108
>TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10300.1); Has 364 Blast hits to 364 proteins
in 91 species: Archae - 0; Bacteria - 191; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr3:1140318-1140723 FORWARD
Length = 97
Score = 60 bits (145), Expect = 8e-010
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 NVKVERKVSQRRLEELGVSKWSVWKTVKCKLPWDWQVDQLVYIEEGEVRVVPEGSKRYMQ 435
N+ +E S RRL +LGV W W K ++ + Y+ +G+V+V P+GS +++
Sbjct: 2 NIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFVE 61
Query: 436 FLAGDLVRYPKWL----EADLFFNAPYR 507
F AGDLV PK L + LF + Y+
Sbjct: 62 FGAGDLVTIPKGLSCTWDVSLFIDKHYK 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,247,013
Number of Sequences: 33410
Number of Extensions: 27357247013
Number of Successful Extensions: 899867250
Number of sequences better than 0.0: 0
|
