BLASTX 7.6.2
Query= UN59888 /QuerySize=703
(702 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular... 148 5e-036
TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich gly... 91 8e-019
TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant ... 88 4e-018
TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich gly... 85 4e-017
>TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has
280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4;
Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes -
136 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE
Length = 432
Score = 148 bits (371), Expect = 5e-036
Identities = 87/109 (79%), Positives = 89/109 (81%), Gaps = 11/109 (10%)
Frame = +3
Query: 390 LHRLLPP-----FTNSALPSTAQSPNNSYLSLAANSSPVGGPSSSIYATGPYAHETQLVS 554
L L PP FTNSALPST QSP N YLSLAANS GGPSSS+YATGPYAHETQLVS
Sbjct: 66 LSLLAPPSSPASFTNSALPSTTQSP-NCYLSLAANSP--GGPSSSMYATGPYAHETQLVS 122
Query: 555 PPPVFSTFTTEPSTAPFTPPSELACHLTTPSSPDVPYARFLTSSSVDLK 701
PPVFSTFTTEPSTAPFTPP ELA LT PSSPDVPYARFLT SS+DLK
Sbjct: 123 -PPVFSTFTTEPSTAPFTPPPELA-RLTAPSSPDVPYARFLT-SSMDLK 168
Score = 82 bits (201), Expect = 3e-016
Identities = 49/76 (64%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = +1
Query: 208 GGCLRVFSCFKSQKGGKRIVPASRIPEGGGNVSSASQPN--QPGGVLTNQATGGGGVHFV 381
GGCL VFSCFKSQKGGKRIVPASRIPE GGNV SASQPN GVL NQA GG + +
Sbjct: 12 GGCLGVFSCFKSQKGGKRIVPASRIPE-GGNV-SASQPNGAHQAGVLNNQAAGGINLSLL 69
Query: 382 LLSSTVFSRPSQTLPS 429
S+ S + LPS
Sbjct: 70 APPSSPASFTNSALPS 85
>TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr5:21283093-21285045 REVERSE
Length = 439
Score = 91 bits (223), Expect = 8e-019
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +3
Query: 411 FTNSALPSTAQSPNNSYLSLAANSSPVGGPSSSIYATGPYAHETQLVSPPPVFSTFTTEP 590
F S S + SP LSL +N+ P S++ GPYA+ETQ V+ PPVFS F TEP
Sbjct: 97 FLQSDPSSVSHSPVGP-LSLTSNTFSPKEP-QSVFTVGPYANETQPVT-PPVFSAFITEP 153
Query: 591 STAPFTPPSELACHLTTPSSPDVPYARFLTSS 686
STAP+TPP E + H+TTPSSP+VP+A+ LTSS
Sbjct: 154 STAPYTPPPESSVHITTPSSPEVPFAQLLTSS 185
>TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species:
Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111;
Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink). |
chr1:23636122-23637348 REVERSE
Length = 359
Score = 88 bits (217), Expect = 4e-018
Identities = 56/112 (50%), Positives = 68/112 (60%), Gaps = 17/112 (15%)
Frame = +3
Query: 381 LT*LHRLLPP-----FTNSALPSTAQSPNN--SYLSLAANSSPVGGPSSSIYATGPYAHE 539
+T L + PP F S PS QSP S+ L N+ P SI+A GPYAHE
Sbjct: 87 ITTLPFIAPPSSPASFFQSEPPSATQSPVGILSFSPLPCNNRP------SIFAIGPYAHE 140
Query: 540 TQLVSPPPVFSTFTTEPSTAPFTPP---SELACHLTTPSSPDVPYARFLTSS 686
TQLVS PPVFST+TTEPS+AP TPP S + TTPSSP+VP+A+ S+
Sbjct: 141 TQLVS-PPVFSTYTTEPSSAPITPPLDDSSIYLTTTTPSSPEVPFAQLFNSN 191
>TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr4:13067447-13069296 REVERSE
Length = 450
Score = 85 bits (208), Expect = 4e-017
Identities = 50/93 (53%), Positives = 59/93 (63%), Gaps = 14/93 (15%)
Frame = +3
Query: 411 FTNSALPSTAQSPNNSYL-SLAANSSPVGGPSSSIYATGPYAHETQLVSPPPVFSTFTTE 587
F S PS + +P+ L SL N P S + GPYAHETQ V+ PPVFS FTTE
Sbjct: 97 FLPSGPPSASHTPDPGLLCSLTVNEPP------SAFTIGPYAHETQPVT-PPVFSAFTTE 149
Query: 588 PSTAPFTPPSELACHLTTPSSPDVPYARFLTSS 686
PSTAPFTPP E +PSSP+VP+A+ LTSS
Sbjct: 150 PSTAPFTPPPE------SPSSPEVPFAQLLTSS 176
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,398,759,699
Number of Sequences: 33410
Number of Extensions: 27398759699
Number of Successful Extensions: 899884991
Number of sequences better than 0.0: 0
|
