BLASTX 7.6.2
Query= UN59908 /QuerySize=737
(736 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase,... 235 4e-062
TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase,... 193 2e-049
TAIR9_protein||AT5G54910.1 | Symbols: | DEAD/DEAH box helicase,... 104 6e-023
TAIR9_protein||AT5G08610.1 | Symbols: | DEAD box RNA helicase (... 101 8e-022
TAIR9_protein||AT5G63630.1 | Symbols: | DEAD box RNA helicase, ... 97 1e-020
TAIR9_protein||AT1G77030.1 | Symbols: | ATP binding / ATP-depen... 88 4e-018
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 78 6e-015
TAIR9_protein||AT4G09730.1 | Symbols: | DEAD/DEAH box helicase,... 77 7e-015
TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase,... 75 3e-014
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 74 6e-014
TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEA... 74 1e-013
TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEA... 74 1e-013
TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, ... 70 1e-012
TAIR9_protein||AT3G01540.2 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 70 1e-012
TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mito... 70 1e-012
TAIR9_protein||AT3G01540.1 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 70 1e-012
TAIR9_protein||AT3G01540.3 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 70 1e-012
TAIR9_protein||AT3G01540.4 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 70 1e-012
TAIR9_protein||AT1G16280.1 | Symbols: | DEAD/DEAH box helicase,... 70 2e-012
>TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:6399724-6403007 REVERSE
Length = 569
Score = 235 bits (597), Expect = 4e-062
Identities = 130/198 (65%), Positives = 153/198 (77%), Gaps = 6/198 (3%)
Frame = +3
Query: 141 KKSVRK-RNRAKKNDHPKQEEEEEEEVENADEIQNKMEKKVKNVKKKLQGRGKTHEEKQE 317
K SV + + R +K K+ E+++ E + +N E + K+ KK + RGK EE+++
Sbjct: 6 KSSVEELKKRVRKRSRGKKNEQQKAEEKTHTVEENADETQKKSEKKVKKVRGKIEEEEEK 65
Query: 318 EEVEAKGEEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQAGSIP 497
E GE +E+ +V+VGKGIMTN TF+SLDLS+ T AIK MGF++MTQIQAGSI
Sbjct: 66 VEAMEDGE----DEKNIVIVGKGIMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQ 121
Query: 498 PLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVA 677
PLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVA
Sbjct: 122 PLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVA 181
Query: 678 EELLKHHHSLTVSMVIGG 731
EELLK HHS TVSMVIGG
Sbjct: 182 EELLK-HHSQTVSMVIGG 198
Score = 75 bits (184), Expect = 3e-014
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +3
Query: 105 MVELEKNSSEELKKSVRKRNRAKKNDHPKQEEEEEEEVENADEIQNKMEKKVKNVKKKLQ 284
MVE +K+S EELKK VRKR+R KKN+ K EE+ ENADE Q K EKKVK V
Sbjct: 1 MVESDKSSVEELKKRVRKRSRGKKNEQQKAEEKTHTVEENADETQKKSEKKVKKV----- 55
Query: 285 GRGKTHEEKQEEEVEAKGEEVVN 353
RGK EE+++ E GE+ N
Sbjct: 56 -RGKIEEEEEKVEAMEDGEDEKN 77
>TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:26358328-26361244 FORWARD
Length = 634
Score = 193 bits (488), Expect = 2e-049
Identities = 112/215 (52%), Positives = 147/215 (68%), Gaps = 23/215 (10%)
Frame = +3
Query: 132 EELKKSVRKRNR-----------AKKNDHPKQEEEEEEEVENA----DEIQNKMEKKVKN 266
EE KK +K+N+ A + PK+++++ ++++ DE + ++ +
Sbjct: 57 EEPKKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIAEEEEP 116
Query: 267 VKKKLQGRGKTHEEKQEEEVEAKGEEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAI 446
KKK + R T + +EEEVE K EE EE IMTN+TFESL LSD+T+ +I
Sbjct: 117 KKKKKKQRKDTEAKSEEEEVEDKEEEKKLEE-------TSIMTNKTFESLSLSDNTYKSI 169
Query: 447 KSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGV 626
K MGF MTQIQA +IPPL+ G+DVLGAARTGSGKTLAFLIPAVELL++ +F+PRNGTGV
Sbjct: 170 KEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGV 229
Query: 627 IVICPTRELAIQTKNVAEELLKHHHSLTVSMVIGG 731
+VICPTRELAIQ+ VA+ELLK +HS TV VIGG
Sbjct: 230 LVICPTRELAIQSYGVAKELLK-YHSQTVGKVIGG 263
>TAIR9_protein||AT5G54910.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:22298668-22301719 REVERSE
Length = 740
Score = 104 bits (259), Expect = 6e-023
Identities = 54/109 (49%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Frame = +3
Query: 405 FESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVEL 584
F L +SD T +K + MT +Q+ +IP L G+D+LGAARTGSGKTLAF+IP +E
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 585 LFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVSMVIGG 731
L +ER+SP +G G I+I PTRELA QT V ++ K H + ++IGG
Sbjct: 133 LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGK-FHKFSAGLLIGG 180
>TAIR9_protein||AT5G08610.1 | Symbols: | DEAD box RNA helicase (RH26) |
chr5:2790341-2794059 FORWARD
Length = 851
Score = 101 bits (249), Expect = 8e-022
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Frame = +3
Query: 210 EEVENADEIQNKMEKKVKNVKKKLQGRGKTHEEKQEEE------VEAKGEEVVNEEEKMV 371
EE +++D+ +N++ + N+ L + E+ + +E AK + + V
Sbjct: 316 EEEDSSDDDENRV--GLGNI-DDLPSEDSSDEDDENDEPLIKKAASAKAVQTDKPTGEHV 372
Query: 372 VVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGK 551
++ F+ LS + AIK GFE MT +Q ++P +L+GKDVL A+TG+GK
Sbjct: 373 KTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGK 432
Query: 552 TLAFLIPAVELLFKERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHHSLTVSM 719
T+AFL+PA+E + K + R+ V+V+CPTRELA Q A LLK+H S+ V +
Sbjct: 433 TVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQV 492
Query: 720 VI 725
VI
Sbjct: 493 VI 494
>TAIR9_protein||AT5G63630.1 | Symbols: | DEAD box RNA helicase, putative |
chr5:25472598-25475196 REVERSE
Length = 523
Score = 97 bits (239), Expect = 1e-020
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Frame = +3
Query: 339 EEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKD 518
+E V E +K +T F+ LS + AIK G+E MT +Q ++P +L+GKD
Sbjct: 34 KENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKD 93
Query: 519 VLGAARTGSGKTLAFLIPAVELLFKE-RFSPRNGTG---VIVICPTRELAIQTKNVAEEL 686
VL A+TG+GKT+AFL+P++E++ K SP N +VICPTRELA Q A L
Sbjct: 94 VLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTL 153
Query: 687 LKHHHSLTVSMVI 725
LK+H S+ V +VI
Sbjct: 154 LKYHPSIGVQVVI 166
>TAIR9_protein||AT1G77030.1 | Symbols: | ATP binding / ATP-dependent helicase/
RNA binding / helicase/ hydrolase, acting on acid anhydrides, in
phosphorus-containing anhydrides / nucleic acid binding |
chr1:28947492-28951526 REVERSE
Length = 892
Score = 88 bits (217), Expect = 4e-018
Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
Frame = +3
Query: 324 VEAKGEEV-----VNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQAG 488
VE KG V ++ +EK GK + FESL+L + F+AIK G++ T IQ
Sbjct: 2 VEGKGFLVSSVTELHRKEKQKKKGK----SGGFESLNLGPNVFNAIKKKGYKVPTPIQRK 57
Query: 489 SIPPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTK 668
++P +L G DV+ ARTGSGKT AFLIP +E L ++ P+ G +++ PTR+LA QT
Sbjct: 58 TMPLILSGVDVVAMARTGSGKTAAFLIPMLEKL--KQHVPQGGVRALILSPTRDLAEQTL 115
Query: 669 NVAEELLKHHHSLTVSMVIGG 731
+EL K L VS+++GG
Sbjct: 116 KFTKELGK-FTDLRVSLLVGG 135
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 78 bits (190), Expect = 6e-015
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Frame = +3
Query: 342 EVVNEEEKMVVVGKGIMTNE-TFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKD 518
E+ ++ ++ G+ I TFES L + S GF T IQA + P L+ +D
Sbjct: 415 EIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRD 474
Query: 519 VLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHH 698
++ A+TGSGKTL +LIPA LL R RNG V+++ PTRELA Q + +E L+
Sbjct: 475 IVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQ---IQDEALRFG 531
Query: 699 HSLTVS 716
S +S
Sbjct: 532 RSSRIS 537
>TAIR9_protein||AT4G09730.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:6136333-6139510 FORWARD
Length = 622
Score = 77 bits (189), Expect = 7e-015
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Frame = +3
Query: 300 HEEKQEEEVEAKGEEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQI 479
H ++ + + + VV EE+ + K E F+ L LS+ A++ + E T+I
Sbjct: 79 HLKESAKPPQQRPSSVVGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEI 138
Query: 480 QAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKE------RFSPRNGTGVIVICP 641
Q IP ++E K V+ + TGSGKTLA+L+P V+L+ ++ + PR +V+CP
Sbjct: 139 QCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRR-PRTVVLCP 197
Query: 642 TRELAIQTKNVAEELLKH 695
TREL+ Q VA+ + H
Sbjct: 198 TRELSEQVYRVAKSISHH 215
>TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH16) | chr4:16631661-16634834 FORWARD
Length = 627
Score = 75 bits (184), Expect = 3e-014
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Frame = +3
Query: 306 EKQEEEVEAKGEEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQA 485
EK EE E + + EE+K K +FE L L A+ G E T IQ
Sbjct: 21 EKAEEVEEQRNDREQEEEQKEEEAPK------SFEELGLDSRLIRALTKKGIEKPTLIQQ 74
Query: 486 GSIPPLLEGKDVLGAARTGSGKTLAFLIPAVELLF------KERFSPRNGTGVIVICPTR 647
+IP +LEGKDV+ A+TGSGKTLA+L+P ++ LF K++ +P ++ P+R
Sbjct: 75 SAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLAP----SAFILVPSR 130
Query: 648 ELAIQTKNVAEELLK 692
EL Q L++
Sbjct: 131 ELCQQVYTEVSSLIE 145
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 74 bits (181), Expect = 6e-014
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +3
Query: 399 ETFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAV 578
+TFE S AIK +E T IQ ++P +L G+DV+G A+TGSGKT AF++P +
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 579 ELLFKERFSPRNGTGVIVIC-PTRELAIQTKNVAEELLKHHHSLTVSMVIGGI 734
+ + R+ + VIC PTRELA Q A++ K + L VS V GG+
Sbjct: 288 VHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSK-AYGLRVSAVYGGM 339
>TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25318967-25322071 REVERSE
Length = 592
Score = 74 bits (179), Expect = 1e-013
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 405 FESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPA-VE 581
F+ + D+ AI +GF T IQA P L+G+D++G A TGSGKTLA+L+PA V
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQ 662
+ + R +G V+++ PTRELA+Q
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQ 253
>TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25319798-25322071 REVERSE
Length = 485
Score = 74 bits (179), Expect = 1e-013
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 405 FESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPA-VE 581
F+ + D+ AI +GF T IQA P L+G+D++G A TGSGKTLA+L+PA V
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQ 662
+ + R +G V+++ PTRELA+Q
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQ 253
>TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, putative (RH20)
| chr1:20574634-20577141 FORWARD
Length = 502
Score = 70 bits (170), Expect = 1e-012
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Frame = +3
Query: 324 VEAKGEEVVNEEEKM---VVVGKGI-MTNETFESLDLSDHTFHAIKSMGFEHMTQIQAGS 491
V A + V E K+ V GK I ++F + D+ +K GF T IQ+
Sbjct: 70 VAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQG 129
Query: 492 IPPLLEGKDVLGAARTGSGKTLAFLIPA-VELLFKERFSPRNGTGVIVICPTRELAIQTK 668
P ++G+D++G A TGSGKTL++L+PA V + + + +G V+V+ PTRELA+Q +
Sbjct: 130 WPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQ 189
Query: 669 NVAEELLKHHHSLTVSMVIGGI 734
A + + + + GG+
Sbjct: 190 QEASK-FGSSSKIKTTCIYGGV 210
>TAIR9_protein||AT3G01540.2 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 70 bits (170), Expect = 1e-012
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +3
Query: 402 TFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVE 581
+FE+ + S GF T IQA S P ++G+D++ A+TGSGKTL +LIP
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVS 716
L + R R G ++V+ PTRELA Q + EE +K S +S
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQ---IQEEAVKFGRSSRIS 260
>TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mitochondrial RNA
helicase 2); ATP binding / ATP-dependent helicase/ helicase/ nucleic
acid binding | chr3:7892641-7895145 FORWARD
Length = 617
Score = 70 bits (170), Expect = 1e-012
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Frame = +3
Query: 324 VEAKGEEVVNEEEKMVVVGKGIMTNETFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPL 503
+ E V + E V G G+ +E L +S A+ S G E + IQ + P
Sbjct: 85 ISESSERRVGDSES--VGGDGLAISE----LGISPEIVKALSSKGIEKLFPIQKAVLEPA 138
Query: 504 LEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTG----VIVICPTRELAIQTKN 671
+EG+D++G ARTG+GKTLAF IP ++ + K ++ ++G G +V+ PTRELA +
Sbjct: 139 MEGRDMIGRARTGTGKTLAFGIPIIDKIIK--YNAKHGRGRNPLCLVLAPTRELA---RQ 193
Query: 672 VAEELLKHHHSLTVSMVIGG 731
V +E + SL + GG
Sbjct: 194 VEKEFRESAPSLDTICLYGG 213
>TAIR9_protein||AT3G01540.1 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 619
Score = 70 bits (170), Expect = 1e-012
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +3
Query: 402 TFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVE 581
+FE+ + S GF T IQA S P ++G+D++ A+TGSGKTL +LIP
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVS 716
L + R R G ++V+ PTRELA Q + EE +K S +S
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQ---IQEEAVKFGRSSRIS 260
>TAIR9_protein||AT3G01540.3 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 70 bits (170), Expect = 1e-012
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +3
Query: 402 TFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVE 581
+FE+ + S GF T IQA S P ++G+D++ A+TGSGKTL +LIP
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVS 716
L + R R G ++V+ PTRELA Q + EE +K S +S
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQ---IQEEAVKFGRSSRIS 260
>TAIR9_protein||AT3G01540.4 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 70 bits (170), Expect = 1e-012
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +3
Query: 402 TFESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVE 581
+FE+ + S GF T IQA S P ++G+D++ A+TGSGKTL +LIP
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 582 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVS 716
L + R R G ++V+ PTRELA Q + EE +K S +S
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQ---IQEEAVKFGRSSRIS 260
>TAIR9_protein||AT1G16280.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr1:5568482-5570487 REVERSE
Length = 492
Score = 70 bits (169), Expect = 2e-012
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = +3
Query: 405 FESLDLSDHTFHAIKSMGFEHMTQIQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVEL 584
FE L L++ K +G T +Q +P +L G+DVLG A+TGSGKT AF +P +
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119
Query: 585 LFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHHSLTVSMVIGGI 734
L ++ + G +V+ PTRELA Q + L +L S+++GG+
Sbjct: 120 LAEDPY----GVFALVVTPTRELAFQLAE-QFKALGSCLNLRCSVIVGGM 164
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,398,759,699
Number of Sequences: 33410
Number of Extensions: 27398759699
Number of Successful Extensions: 899884991
Number of sequences better than 0.0: 0
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