Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN60005


BLASTX 7.6.2

Query= UN60005 /QuerySize=761
        (760 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G52380.1 | Symbols:  | Ran-binding protein 1 d...    277   9e-075
TAIR9_protein||AT3G15970.1 | Symbols:  | Ran-binding protein 1 d...    230   1e-060
TAIR9_protein||AT5G58590.1 | Symbols: RANBP1 | RANBP1 (RAN BINDI...     52   4e-007
TAIR9_protein||AT2G30060.1 | Symbols:  | Ran-binding protein 1b ...     49   3e-006
TAIR9_protein||AT1G07140.1 | Symbols: SIRANBP | SIRANBP; Ran GTP...     49   4e-006

>TAIR9_protein||AT1G52380.1 | Symbols:  | Ran-binding protein 1
        domain-containing protein / RanBP1 domain-containing protein |
        chr1:19509979-19511301 FORWARD

          Length = 441

 Score =  277 bits (706), Expect = 9e-075
 Identities = 147/183 (80%), Positives = 160/183 (87%), Gaps = 11/183 (6%)
 Frame = -3

Query: 719 GSGSPFGLGLSTTNTPSLFGA---SIIKKS*GSGGFPSKEEVSTETGEENENAAFSADSI 549
           G+GS FG GL ++N+ S+FGA   SIIKKS GS GFP K+EVSTETGEENE  AFSADSI
Sbjct: 255 GTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGS-GFPPKQEVSTETGEENEKVAFSADSI 313

Query: 548 MFEYQDGGWRERGKGEVKVNVSSNGGKARLVMRAKGNYRLILNASLYPEMKLASMDKKGI 369
           MFEY DGGW+ERGKGE+KVNVSSN GKARLVMRAKGNYRLILNASLYPEMKLA+MDKKGI
Sbjct: 314 MFEYLDGGWKERGKGELKVNVSSNDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKGI 373

Query: 368 TFACVN--SEGKDGLSTFALKFKDPTIVEEFRVAVDKHKGSKPIE-----TAPPLKTPEN 210
           TFACVN  SEGK+GLSTFALKFKDPTIVEEFRVA+DKHK SKP+E     +A PLKTPEN
Sbjct: 374 TFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPEN 433

Query: 209 SPT 201
           SPT
Sbjct: 434 SPT 436

>TAIR9_protein||AT3G15970.1 | Symbols:  | Ran-binding protein 1
        domain-containing protein / RanBP1 domain-containing protein |
        chr3:5408982-5410379 REVERSE

          Length = 466

 Score =  230 bits (584), Expect = 1e-060
 Identities = 123/188 (65%), Positives = 143/188 (76%), Gaps = 11/188 (5%)
 Frame = -3

Query: 731 SFGDGS-GSPFGLGLSTTNTPSLFGASI-----IKKS*GSGGFPSKEEVSTETGEENENA 570
           S G GS  S F  G +     SLFGAS+      K +  +  FPSK++VS ETGEENE A
Sbjct: 274 STGSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKA 333

Query: 569 AFSADSIMFEYQDGGWRERGKGEVKVNVS-SNGGKARLVMRAKGNYRLILNASLYPEMKL 393
           AF+ADS+MFEY +GGW+ERGKGE+KVN+S +   KARLVMR+KGNYRL LNASLYPEMKL
Sbjct: 334 AFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKL 393

Query: 392 ASMDKKGITFACVN--SEGKDGLSTFALKFKDPTIVEEFRVAVDKHKGSKP--IETAPPL 225
           A MDKKGITFACVN  S+ KDGLST ALKFKDPT+VEEFR  +++HK SKP   E A PL
Sbjct: 394 AKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPL 453

Query: 224 KTPENSPT 201
           KTPENSP+
Sbjct: 454 KTPENSPS 461

>TAIR9_protein||AT5G58590.1 | Symbols: RANBP1 | RANBP1 (RAN BINDING PROTEIN 1);
        protein binding | chr5:23680319-23681714 REVERSE

          Length = 220

 Score =  52 bits (123), Expect = 4e-007
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
 Frame = -3

Query: 611 EEVSTETGEENENAAFSADSIMFEYQDGG--WRERGKGEVKVNVSSNGGKARLVMRAKGN 438
           EEV+  TGEE+E+A     S M+ +   G  W+ERG G VK+      GK RLVMR    
Sbjct:  34 EEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKT 93

Query: 437 YRLILNASLYPEMKL---ASMDKKGITFACVNSEGKDGLSTFALKFKD----PTIVEEFR 279
            ++  N  +   M +   +  +K  +  A   S+G+     F ++F       T +E+F 
Sbjct:  94 LKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFT 153

Query: 278 VAVDKHKGSK 249
              +  +  K
Sbjct: 154 EIAESQQVGK 163

>TAIR9_protein||AT2G30060.1 | Symbols:  | Ran-binding protein 1b (RanBP1b) |
        chr2:12827035-12828551 FORWARD

          Length = 218

 Score =  49 bits (115), Expect = 3e-006
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 611 EEVSTETGEENENAAFSADSIMFEYQDGG--WRERGKGEVKVNVSSNGGKARLVMRAKGN 438
           EEV+  TGEE+E+      S ++ +   G  W+ERG G VK       GK RLVMR    
Sbjct:  37 EEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKT 96

Query: 437 YRLILNASLYPEMKL---ASMDKKGITFACVNSEGKDGLSTFALKFKDPTIVEEFRVAVD 267
            ++  N  +   M +   A  DK  +  A   S+G+     F ++F     VE  +  + 
Sbjct:  97 LKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFAS---VENCKAFMQ 153

Query: 266 KHK 258
           K K
Sbjct: 154 KFK 156

>TAIR9_protein||AT1G07140.1 | Symbols: SIRANBP | SIRANBP; Ran GTPase binding |
        chr1:2192360-2193688 REVERSE

          Length = 229

 Score =  49 bits (114), Expect = 4e-006
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -3

Query: 611 EEVSTETGEENENAAFSADSIMFEYQDGG--WRERGKGEVKVNVSSNGGKARLVMRAKGN 438
           EEV+  TGEE+E+A     S ++ +      W+ERG G VK     N GK RLVMR    
Sbjct:  35 EEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKT 94

Query: 437 YRLILN 420
            ++  N
Sbjct:  95 LKICAN 100

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,440,306,640
Number of Sequences: 33410
Number of Extensions: 27440306640
Number of Successful Extensions: 899900151
Number of sequences better than 0.0: 0