BLASTX 7.6.2
Query= UN60375 /QuerySize=569
(568 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13190.1 | Symbols: | RNA recognition motif (... 161 3e-040
TAIR9_protein||AT5G55670.1 | Symbols: | RNA recognition motif (... 64 6e-011
TAIR9_protein||AT5G23080.1 | Symbols: TGH | TGH (TOUGH); RNA bin... 50 8e-007
TAIR9_protein||AT5G23080.2 | Symbols: TGH | TGH (TOUGH); RNA bin... 50 8e-007
TAIR9_protein||AT3G03340.1 | Symbols: UNE6 | UNE6 (unfertilized ... 49 1e-006
TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary fact... 47 9e-006
>TAIR9_protein||AT1G13190.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:4499633-4501354 FORWARD
Length = 574
Score = 161 bits (406), Expect = 3e-040
Identities = 83/96 (86%), Positives = 87/96 (90%), Gaps = 5/96 (5%)
Frame = +1
Query: 1 EDENQEKEEKQPSREKERATTERDWSESSGGDRRHKSHREEKDSHREY---RHRDSEEYD 171
EDE QEKEEK PSR+KERATTERDWSE+S GDRRHKSHREEKDSHREY R RDS+E+D
Sbjct: 481 EDETQEKEEK-PSRDKERATTERDWSENS-GDRRHKSHREEKDSHREYKQQRDRDSDEFD 538
Query: 172 RGQSSSKSRSRSRMSEDDHRSRSRDADYGKRRRGD* 279
RGQSS KSRSRSRMSEDDHRSRSRDADYGKRRRGD*
Sbjct: 539 RGQSSLKSRSRSRMSEDDHRSRSRDADYGKRRRGD* 574
>TAIR9_protein||AT5G55670.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22544669-22546801 REVERSE
Length = 711
Score = 64 bits (154), Expect = 6e-011
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +1
Query: 13 QEKEEKQPSREKERATTERDWSESSGGDRRHKSHREEKDSHREYRHRD----SEEYDRGQ 180
+E+E + +++ER+ E RH+ RE RHRD EE++RG+
Sbjct: 617 REREREHHHKDRERSREHVRDRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGR 676
Query: 181 SSSKSRSRSRMS-EDDHRSRSRDADYGKRRR 270
SS+ ++SR+S ED+HRS+SRD DYGKRRR
Sbjct: 677 -SSRGHNKSRLSREDNHRSKSRDTDYGKRRR 706
>TAIR9_protein||AT5G23080.1 | Symbols: TGH | TGH (TOUGH); RNA binding / protein
binding | chr5:7743226-7748889 REVERSE
Length = 931
Score = 50 bits (118), Expect = 8e-007
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 EDENQEKEEKQPSREKERATTERDWSESSGGDRRHKSHREEKDSHREYRHRDSEEYDRGQ 180
E+++++K EK P K + SESSG +RR K + +KD HR DS +
Sbjct: 817 EEKSRKKREKSPG--KRSGGNDLSSSESSGDERRRKRY-NKKDRHRNDSESDSSSDYHSR 873
Query: 181 SSSKSRSRSRMSEDDHRSRSRDADYGKRRR 270
SRSRS+ E RS + K RR
Sbjct: 874 DKQGSRSRSKRRESSREKRSSHKKHSKHRR 903
>TAIR9_protein||AT5G23080.2 | Symbols: TGH | TGH (TOUGH); RNA binding / protein
binding | chr5:7743226-7748889 REVERSE
Length = 901
Score = 50 bits (118), Expect = 8e-007
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 EDENQEKEEKQPSREKERATTERDWSESSGGDRRHKSHREEKDSHREYRHRDSEEYDRGQ 180
E+++++K EK P K + SESSG +RR K + +KD HR DS +
Sbjct: 787 EEKSRKKREKSPG--KRSGGNDLSSSESSGDERRRKRY-NKKDRHRNDSESDSSSDYHSR 843
Query: 181 SSSKSRSRSRMSEDDHRSRSRDADYGKRRR 270
SRSRS+ E RS + K RR
Sbjct: 844 DKQGSRSRSKRRESSREKRSSHKKHSKHRR 873
>TAIR9_protein||AT3G03340.1 | Symbols: UNE6 | UNE6 (unfertilized embryo sac 6) |
chr3:786439-789762 FORWARD
Length = 403
Score = 49 bits (116), Expect = 1e-006
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 13 QEKEEKQPSREKERATTERDWSESSGGDRRHKSHR-EEKDSHREYRHRDSEEYDRGQSSS 189
+E+ +++ S+E+E + E+S RR R ++D H + +YDR S S
Sbjct: 317 KERSKERNSKERESSKDREKEQETSREHRRDYDRRSRDRDRHHDRDREQDRDYDRSHSRS 376
Query: 190 KSRSRSRMSEDDHRSRSRDADYGKRRR 270
+ RSRSR RSR R DY + RR
Sbjct: 377 RRRSRSR-----SRSRDRPRDYDRHRR 398
>TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary factor large
subunit, putative | chr1:22424008-22427806 FORWARD
Length = 590
Score = 47 bits (109), Expect = 9e-006
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 10 NQEKEEKQPSREKERATTERDWSESSGGDRRHKSHREEKDSHREYRH-RDSEEYDRGQSS 186
++ ++ R +ER+ D + R + R +D RE RH R S R +S
Sbjct: 101 DRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSE 160
Query: 187 SKSRSRSR-MSEDDHRSRSRDADYGKRRRGD*NRTSHVLRASSLLFDASKQIP 342
+SRS R SE RSRSR KRR G +L A+++ A+ Q+P
Sbjct: 161 RRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFDMAPPDMLAATAVA--AAGQVP 211
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,482,002,814
Number of Sequences: 33410
Number of Extensions: 27482002814
Number of Successful Extensions: 899913489
Number of sequences better than 0.0: 0
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