BLASTX 7.6.2
Query= UN60476 /QuerySize=477
(476 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53930.1 | Symbols: | unknown protein | chr5:... 127 4e-030
TAIR9_protein||AT5G49400.1 | Symbols: | zinc knuckle (CCHC-type... 67 5e-012
TAIR9_protein||AT5G53800.1 | Symbols: | unknown protein | chr5:... 64 4e-011
TAIR9_protein||AT3G49601.1 | Symbols: | FUNCTIONS IN: molecular... 62 1e-010
TAIR9_protein||AT1G70620.1 | Symbols: | cyclin-related | chr1:2... 60 6e-010
TAIR9_protein||AT2G28910.1 | Symbols: CXIP4 | CXIP4 (CAX INTERAC... 60 7e-010
TAIR9_protein||AT1G70620.2 | Symbols: | cyclin-related | chr1:2... 57 4e-009
TAIR9_protein||AT4G02720.1 | Symbols: | unknown protein | chr4:... 57 6e-009
TAIR9_protein||AT5G23080.1 | Symbols: TGH | TGH (TOUGH); RNA bin... 52 2e-007
TAIR9_protein||AT5G23080.2 | Symbols: TGH | TGH (TOUGH); RNA bin... 52 2e-007
TAIR9_protein||AT3G59800.1 | Symbols: | unknown protein | chr3:... 47 4e-006
>TAIR9_protein||AT5G53930.1 | Symbols: | unknown protein |
chr5:21894387-21896283 REVERSE
Length = 530
Score = 127 bits (318), Expect = 4e-030
Identities = 82/146 (56%), Positives = 101/146 (69%), Gaps = 18/146 (12%)
Frame = +3
Query: 57 KSSSSSKKLKRSKEDPSKLRSVKKKKTK-TKRRKIRRIKDSSDDSESDSSFYSSSSSSSE 233
KSSSSSK +K S +KLRSVKKKK+K K +KIRRIKD S+ S SDSS Y SSSE
Sbjct: 3 KSSSSSKIIKDSS---NKLRSVKKKKSKRNKSKKIRRIKDESESSGSDSSLY----SSSE 55
Query: 234 EDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKK------ 395
+DYRR+K+RRSKLSKK+ R+ S D +D ++ KKRSKRKD++V KK
Sbjct: 56 DDYRRKKKRRSKLSKKRSRKRYSSSESDDDSDDDRLLKKKKRSKRKDENVGKKKKKVVSR 115
Query: 396 KRRRRDTSSSSTSSDEN----SESSD 461
KRR+RD SSSSTSS+++ SES D
Sbjct: 116 KRRKRDLSSSSTSSEQSDNDGSESDD 141
>TAIR9_protein||AT5G49400.1 | Symbols: | zinc knuckle (CCHC-type) family
protein | chr5:20031154-20031981 FORWARD
Length = 276
Score = 67 bits (162), Expect = 5e-012
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Frame = +3
Query: 84 KRSKEDPSKLRSVKKKKTKTKRRKIRRIKDSSDDSES-------------DSSFYSSSSS 224
+ + D + ++ +K++K +RK R DS DSE+ SS YSSSS
Sbjct: 151 EEERPDATNGKAEVEKRSKKSKRKHRSKSDSESDSEASVFETDSDGSSGESSSEYSSSSD 210
Query: 225 SSEEDYRREKQRRSKLSKKKKRESRKRYSSSDSEGED-----DDIRVKKRSKRKDKHVMT 389
S +E RR K ++SK +K+++E R+RYSSS SE + D + RS+RK K
Sbjct: 211 SEDERRRRRKAKKSKKKQKQRKERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRH 270
Query: 390 KKKRR 404
KRR
Sbjct: 271 SNKRR 275
>TAIR9_protein||AT5G53800.1 | Symbols: | unknown protein |
chr5:21848180-21849935 FORWARD
Length = 352
Score = 64 bits (154), Expect = 4e-011
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Frame = +3
Query: 12 RRKRKQIH*GGSTMG---KSSSSSKKLKRSKEDPSKLRSVKKKKTKTKRRKIRRIKDSSD 182
+R+ K + GS G S S ++ +RS++D K +S +K+ RR+ R SS
Sbjct: 51 KRRTKDGNDSGSESGLESGSESEKEERRRSRKDRGKRKS--DRKSSRSRRRRRDYSSSSS 108
Query: 183 DSESDS-SFYSSSSSSSEEDYRREKQRRSKLSKKKKRESRKRYSSSDSE---GEDDDIRV 350
DSES+S S YS S S ED RR ++R+ K +++++E ++R D + D D
Sbjct: 109 DSESESESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDK 168
Query: 351 KKRSKRKDKHVMTKK 395
K++ K+K K KK
Sbjct: 169 KRKEKKKKKSEKVKK 183
Score = 53 bits (126), Expect = 7e-008
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +3
Query: 132 KTKTKRRKIRRIKDSSDDSESDSSFYSSSSSSSEEDYRREKQRRSKLSKKKKRESRKRYS 311
K + + R IRR E S S + RRE +RR+K ES S
Sbjct: 14 KREVEDRDIRR----KSSREKPSGSGKDSGEEKDVSRRRESKRRTKDGNDSGSESGLE-S 68
Query: 312 SSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRRRDTSSSSTSSDENSES 455
S+SE E+ K R KRK ++ +RRRRD SSSS+ S+ SES
Sbjct: 69 GSESEKEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESESES 116
>TAIR9_protein||AT3G49601.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing
factor, Cwf21 (InterPro:IPR013170); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G37820.1); Has 58354 Blast hits to
32469 proteins in 1203 species: Archae - 56; Bacteria - 5471; Metazoa -
26539; Fungi - 6511; Plants - 2874; Viruses - 282; Other Eukaryotes -
16621 (source: NCBI BLink). | chr3:18387504-18389279 REVERSE
Length = 592
Score = 62 bits (149), Expect = 1e-010
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Frame = +3
Query: 120 VKKKKTKTKRRKIRRIKDSSD------DSESDSSFYSSSSSSSEEDYRREKQRRS-KLSK 278
V +K K K K +R D D + +S SS +++ R+++RRS K +K
Sbjct: 186 VDEKDAKVKESKKQRGGDDDDVDVVKRHKKKESKKRRHDDSSESDEHGRDRRRRSKKKAK 245
Query: 279 KKKRESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRRRDTSSSSTSSDENSESS 458
+K+ES SSSDSE + D KKR ++K T KKR RR S SS S + S+ S
Sbjct: 246 GRKQESESDSSSSDSESDSDSDDGKKRGRKKP--TKTTKKRSRRKRSVSSESEEVESDDS 303
Query: 459 DGMRMS 476
+R S
Sbjct: 304 KKLRKS 309
Score = 51 bits (121), Expect = 3e-007
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = +3
Query: 57 KSSSSSKKLKRSKEDPSKLRSVKKKKTKTKRRKIRRIKDSSDDSESDSSFYSSSSSSSEE 236
K + KR +D S+ + + +RR ++ K +SESDSS S S S S+
Sbjct: 211 KRHKKKESKKRRHDDSSESDEHGRDR---RRRSKKKAKGRKQESESDSS-SSDSESDSDS 266
Query: 237 DYRREKQRRSKLSKKKKRESRKRYSSSDSEG-EDDDIRVKKRSKRKDKHVMTKKKRRRRD 413
D +++ R+ KKR RKR SS+SE E DD + ++S +K + RD
Sbjct: 267 DDGKKRGRKKPTKTTKKRSRRKRSVSSESEEVESDDSKKLRKSHKKSLPSNRSGSKELRD 326
Query: 414 TSSSSTSSDENSESSD 461
+ + SD
Sbjct: 327 KHDEQSRAGRKRHDSD 342
Score = 50 bits (117), Expect = 8e-007
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Frame = +3
Query: 12 RRKRKQIH*GGSTMGKSSSSSKKLKRSKEDPSKLRSVKK--KKTKTKRRKIRRIKDSSDD 185
RR +K+ SSSS S D K R KK K TK + R+ R + S++
Sbjct: 238 RRSKKKAKGRKQESESDSSSSDSESDSDSDDGKKRGRKKPTKTTKKRSRRKRSVSSESEE 297
Query: 186 SESDSS--FYSSSSSSSEEDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVKKR 359
ESD S S S + K+ R K ++ R RKR+ S SE E +D + R
Sbjct: 298 VESDDSKKLRKSHKKSLPSNRSGSKELRDK-HDEQSRAGRKRHDSDVSEPESEDNKQPLR 356
Query: 360 SKRKDKHVMTKKKRRRRDTSS 422
K + K+KR D +
Sbjct: 357 KKEEAYRGGQKQKRDDEDVEA 377
>TAIR9_protein||AT1G70620.1 | Symbols: | cyclin-related |
chr1:26626634-26630755 FORWARD
Length = 898
Score = 60 bits (144), Expect = 6e-010
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Frame = +3
Query: 90 SKEDPSKLRSVKKKKTKTKRRKIRRIKDSSDDSESDSSFYSSSSSSSEEDYRREKQRRSK 269
SKED K K+K+ + +R + RR ++SS D S +S+ SS++ R+ + RR
Sbjct: 756 SKEDRGKR---KEKEKEEERSRHRRAENSSKDKRRRS---PTSNESSDDSKRKSRSRRRS 809
Query: 270 LSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRRRDTSSSSTSSDENS 449
+S R RKR S S E DD R K SKRK++ K RRR +S S S
Sbjct: 810 VSPSPVRSRRKRSSPSSDESSDDSKR-KSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQH 868
Query: 450 ESS 458
+++
Sbjct: 869 KNT 871
>TAIR9_protein||AT2G28910.1 | Symbols: CXIP4 | CXIP4 (CAX INTERACTING PROTEIN
4); nucleic acid binding / zinc ion binding | chr2:12415992-12416990
REVERSE
Length = 333
Score = 60 bits (143), Expect = 7e-010
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 26/124 (20%)
Frame = +3
Query: 129 KKTKTKRRKIRRIKDSSDDSESDS-------------SFYSSSSSSSEEDYRREKQRRSK 269
KKT + R+K +R+ D S DS+SDS S + S S ED E++ RSK
Sbjct: 173 KKTSSVRKKKKRVSDES-DSDSDSGDRKRRRRSMKKRSSHKRRSLSESED---EEEGRSK 228
Query: 270 LSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRRRDTSSSSTSSDENS 449
++K+R RKR E ED+D R KR RK+ KRRRR + S SD S
Sbjct: 229 --RRKERRGRKRDEDDSDESEDEDDRRVKRKSRKE-------KRRRRSRRNHSDDSDSES 279
Query: 450 ESSD 461
D
Sbjct: 280 SEDD 283
Score = 54 bits (127), Expect = 5e-008
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = +3
Query: 9 IRRKRKQIH*GGSTMGKSSSSSKKLKRS--KEDPSKLRSVKKKKTKTKRRKIRRIKDSSD 182
+R+K+K++ S S K+ +RS K K RS+ + + + + R RR +
Sbjct: 178 VRKKKKRVS-DESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGR 236
Query: 183 DSESDSSFYSSSSSSSEEDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVKKRS 362
+ D S S +ED RR K R+S+ K+++R R SDSE +DD R K+R+
Sbjct: 237 KRDED-----DSDESEDEDDRRVK-RKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRN 290
Query: 363 K 365
K
Sbjct: 291 K 291
>TAIR9_protein||AT1G70620.2 | Symbols: | cyclin-related |
chr1:26626634-26630307 FORWARD
Length = 885
Score = 57 bits (137), Expect = 4e-009
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Frame = +3
Query: 90 SKEDPSKLRSVKKKKTKTKRRKIRRIKDSSDDSESDSSFYSSSSSSSEEDYRREKQRRSK 269
SKED K K+K+ + +R + RR ++SS D S +S+ SS++ R+ + RR
Sbjct: 786 SKEDRGKR---KEKEKEEERSRHRRAENSSKDKRRRS---PTSNESSDDSKRKSRSRRRS 839
Query: 270 LSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRR 407
+S R RKR S S E DD R K SKRK++ K RRR
Sbjct: 840 VSPSPVRSRRKRSSPSSDESSDDSKR-KSSSKRKNRSPSPGKSRRR 884
>TAIR9_protein||AT4G02720.1 | Symbols: | unknown protein | chr4:1204545-1205813
REVERSE
Length = 423
Score = 57 bits (135), Expect = 6e-009
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Frame = +3
Query: 12 RRKRKQIH*GGSTMGKSSSSSKKLKRSKEDPSKLRSVKKKKTKTKRRKIRR---IKDSSD 182
RRKR S +S S + +R ++ SK + + ++ K+R RR DS +
Sbjct: 126 RRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDE 185
Query: 183 DSESDSSFYSSSSSSSEEDYRREKQRRSKL---SKKKKRESRKRYSSSDSEGEDDDIRVK 353
S+ DS S+SSS EE+ + K +R K S K+ + K S SDS+G ++D +++
Sbjct: 186 SSDEDSKAEISASSSGEEEDTKSKSKRRKKSSDSSSKRSKGEKTKSGSDSDGTEEDSKMQ 245
Score = 55 bits (132), Expect = 1e-008
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Frame = +3
Query: 180 DDSESDSSFYSSSSSSSEEDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVK-- 353
DD+ S S SE D R ++R+SK S+ K+R R S S+SEG + D +
Sbjct: 90 DDNSKGKERKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDR 149
Query: 354 --------KRSKRKDKHVMTKKKRRRRDT--SSSSTSSDENSES 455
KR K + KK+ RR T S S SSDE+S++
Sbjct: 150 RRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKA 193
>TAIR9_protein||AT5G23080.1 | Symbols: TGH | TGH (TOUGH); RNA binding / protein
binding | chr5:7743226-7748889 REVERSE
Length = 931
Score = 52 bits (122), Expect = 2e-007
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Frame = +3
Query: 66 SSSKKLKRSKEDPSKLRSVKKKKTK----TKRRKIRRIKDSSDDSESDSSFYSSSSSSSE 233
SS K+L R P V++K + ++ K R+ ++ S S + SSS SS +
Sbjct: 790 SSDKRLDR----PGLKEKVEEKTSSLTLGSEEEKSRKKREKSPGKRSGGNDLSSSESSGD 845
Query: 234 EDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRK-DKHVMTKKKRRRR 410
E R+ ++ + + +S Y S D +G + ++ S+ K H K RR +
Sbjct: 846 ERRRKRYNKKDRHRNDSESDSSSDYHSRDKQGSRSRSKRRESSREKRSSHKKHSKHRRTK 905
Query: 411 DTSSSSTSSDENSESS 458
+SSS SSDE + S
Sbjct: 906 KSSSSRYSSDEEQKES 921
>TAIR9_protein||AT5G23080.2 | Symbols: TGH | TGH (TOUGH); RNA binding / protein
binding | chr5:7743226-7748889 REVERSE
Length = 901
Score = 52 bits (122), Expect = 2e-007
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Frame = +3
Query: 66 SSSKKLKRSKEDPSKLRSVKKKKTK----TKRRKIRRIKDSSDDSESDSSFYSSSSSSSE 233
SS K+L R P V++K + ++ K R+ ++ S S + SSS SS +
Sbjct: 760 SSDKRLDR----PGLKEKVEEKTSSLTLGSEEEKSRKKREKSPGKRSGGNDLSSSESSGD 815
Query: 234 EDYRREKQRRSKLSKKKKRESRKRYSSSDSEGEDDDIRVKKRSKRK-DKHVMTKKKRRRR 410
E R+ ++ + + +S Y S D +G + ++ S+ K H K RR +
Sbjct: 816 ERRRKRYNKKDRHRNDSESDSSSDYHSRDKQGSRSRSKRRESSREKRSSHKKHSKHRRTK 875
Query: 411 DTSSSSTSSDENSESS 458
+SSS SSDE + S
Sbjct: 876 KSSSSRYSSDEEQKES 891
>TAIR9_protein||AT3G59800.1 | Symbols: | unknown protein |
chr3:22094597-22096174 REVERSE
Length = 187
Score = 47 bits (111), Expect = 4e-006
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 108 KLRSVKKKKTKTKRRKIRRIKDSSDDSESDSSFYSSSSSSSEEDYRREKQRRSKLSKKKK 287
K +KK + + K+ R + D+E + SS++ + +K R SK K KK
Sbjct: 63 KEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKSRKDKKDRDSKKKKSKK 122
Query: 288 RESRKRYSSSDSEGEDDDIRVKKRSKRKDKHVMTKKKRRRRDTSSSSTSSD 440
R+ SS S ED+ R + SKR K KK + RD SS + +
Sbjct: 123 RKHYSSSESSSSSDEDESRRSRSSSKRSKKE---KKHKSSRDKHSSKSKHE 170
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,574,999,316
Number of Sequences: 33410
Number of Extensions: 27574999316
Number of Successful Extensions: 905091795
Number of sequences better than 0.0: 0
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