BLASTX 7.6.2
Query= UN60522 /QuerySize=809
(808 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G25500.1 | Symbols: | choline transporter-rel... 236 1e-062
TAIR9_protein||AT1G25500.2 | Symbols: | choline transporter-rel... 236 1e-062
TAIR9_protein||AT1G25500.3 | Symbols: | choline transporter-rel... 106 2e-023
>TAIR9_protein||AT1G25500.1 | Symbols: | choline transporter-related |
chr1:8955595-8957793 REVERSE
Length = 433
Score = 236 bits (602), Expect = 1e-062
Identities = 115/118 (97%), Positives = 116/118 (98%), Gaps = 1/118 (0%)
Frame = +1
Query: 298 MSDSTNSVSPSSDYASISSGDQSLQRSSRRSGDGNRAIVRESRHWHDVFWSAILVIHLIC 477
MSDSTNSVSPSSDYASISSGDQSLQR SRRSGDGNRA+VRESRHWHDVFWSAI VIHLIC
Sbjct: 1 MSDSTNSVSPSSDYASISSGDQSLQR-SRRSGDGNRAVVRESRHWHDVFWSAIFVIHLIC 59
Query: 478 LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 651
LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS
Sbjct: 60 LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 117
Score = 106 bits (263), Expect = 2e-023
Identities = 51/63 (80%), Positives = 53/63 (84%), Gaps = 7/63 (11%)
Frame = +3
Query: 618 WHWCLHQLGLVVLLGSYANEMMKVSVHILTTYLAVVSVLCFWCRQFFWGGAFAIGALLQF 797
W W L LLGSYANEMMKVSVHILTTYLAVVSVLCFWCR FFWGGAFA+G+LLQF
Sbjct: 114 WVWSL-------LLGSYANEMMKVSVHILTTYLAVVSVLCFWCRLFFWGGAFAVGSLLQF 166
Query: 798 LYV 806
LYV
Sbjct: 167 LYV 169
>TAIR9_protein||AT1G25500.2 | Symbols: | choline transporter-related |
chr1:8955437-8957793 REVERSE
Length = 489
Score = 236 bits (602), Expect = 1e-062
Identities = 115/118 (97%), Positives = 116/118 (98%), Gaps = 1/118 (0%)
Frame = +1
Query: 298 MSDSTNSVSPSSDYASISSGDQSLQRSSRRSGDGNRAIVRESRHWHDVFWSAILVIHLIC 477
MSDSTNSVSPSSDYASISSGDQSLQR SRRSGDGNRA+VRESRHWHDVFWSAI VIHLIC
Sbjct: 1 MSDSTNSVSPSSDYASISSGDQSLQR-SRRSGDGNRAVVRESRHWHDVFWSAIFVIHLIC 59
Query: 478 LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 651
LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS
Sbjct: 60 LGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 117
Score = 106 bits (263), Expect = 2e-023
Identities = 51/63 (80%), Positives = 53/63 (84%), Gaps = 7/63 (11%)
Frame = +3
Query: 618 WHWCLHQLGLVVLLGSYANEMMKVSVHILTTYLAVVSVLCFWCRQFFWGGAFAIGALLQF 797
W W L LLGSYANEMMKVSVHILTTYLAVVSVLCFWCR FFWGGAFA+G+LLQF
Sbjct: 114 WVWSL-------LLGSYANEMMKVSVHILTTYLAVVSVLCFWCRLFFWGGAFAVGSLLQF 166
Query: 798 LYV 806
LYV
Sbjct: 167 LYV 169
>TAIR9_protein||AT1G25500.3 | Symbols: | choline transporter-related |
chr1:8955437-8957294 REVERSE
Length = 431
Score = 106 bits (263), Expect = 2e-023
Identities = 51/63 (80%), Positives = 53/63 (84%), Gaps = 7/63 (11%)
Frame = +3
Query: 618 WHWCLHQLGLVVLLGSYANEMMKVSVHILTTYLAVVSVLCFWCRQFFWGGAFAIGALLQF 797
W W L LLGSYANEMMKVSVHILTTYLAVVSVLCFWCR FFWGGAFA+G+LLQF
Sbjct: 56 WVWSL-------LLGSYANEMMKVSVHILTTYLAVVSVLCFWCRLFFWGGAFAVGSLLQF 108
Query: 798 LYV 806
LYV
Sbjct: 109 LYV 111
Score = 97 bits (241), Expect = 8e-021
Identities = 43/43 (100%)
Frame = +1
Query: 523 SDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 651
SDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS
Sbjct: 17 SDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWS 59
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,574,999,316
Number of Sequences: 33410
Number of Extensions: 27574999316
Number of Successful Extensions: 905091795
Number of sequences better than 0.0: 0
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