Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN60578


BLASTX 7.6.2

Query= UN60578 /QuerySize=644
        (643 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces ...     65   3e-010
sp|Q75JC9|Y8484_DICDI Uncharacterized protein DDB_G0271670 OS=Di...     64   7e-010
sp|Q17RH7|TPRXL_HUMAN Putative protein TPRXL OS=Homo sapiens GN=...     61   6e-009
sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 pr...     60   1e-008

>sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces cerevisiae
        GN=SRP40 PE=1 SV=2

          Length = 406

 Score =  65 bits (157), Expect = 3e-010
 Identities = 39/79 (49%), Positives = 50/79 (63%)
 Frame = -1

Query: 358 ASSPSSESSSSTSSTSAARGESSCSSPSETESSSSSSSEPCETASSDSDCSDSACSDSGS 179
           +SS SS SSSS+SS+S++ GESS SS S + SSSS SS+  ++ SS S  S S+ S S S
Sbjct:  31 SSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSS 90

Query: 178 ESEEKQEESDPLSLSPCSS 122
           +SE   E     S S  SS
Sbjct:  91 DSESSSESDSSSSGSSSSS 109

>sp|Q75JC9|Y8484_DICDI Uncharacterized protein DDB_G0271670 OS=Dictyostelium
        discoideum GN=DDB_G0271670 PE=4 SV=1

          Length = 374

 Score =  64 bits (154), Expect = 7e-010
 Identities = 45/102 (44%), Positives = 54/102 (52%)
 Frame = -1

Query: 427 SSSSSGGSSKPYCIDVFSYLPP*ASSPSSESSSSTSSTSAARGESSCSSPSETESSSSSS 248
           SSSSS  SS        S     +SS SS SSSS+SS+S++   SS SS S + SSSSSS
Sbjct:  66 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 125

Query: 247 SEPCETASSDSDCSDSACSDSGSESEEKQEESDPLSLSPCSS 122
           S    ++SS S  S S+ S S S S      S   S S  SS
Sbjct: 126 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 167


 Score =  59 bits (142), Expect = 2e-008
 Identities = 37/79 (46%), Positives = 46/79 (58%)
 Frame = -1

Query: 358 ASSPSSESSSSTSSTSAARGESSCSSPSETESSSSSSSEPCETASSDSDCSDSACSDSGS 179
           +SS SS SSSS+SS+S++   SS SS S + SSSSSSS    ++SS S  S S+ S S S
Sbjct:  66 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 125

Query: 178 ESEEKQEESDPLSLSPCSS 122
            S      S   S S  SS
Sbjct: 126 SSSSSSSSSSSSSSSSSSS 144

>sp|Q17RH7|TPRXL_HUMAN Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5
        SV=2

          Length = 258

 Score =  61 bits (146), Expect = 6e-009
 Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
 Frame = -1

Query: 427 SSSSSGGSSKPYCIDVFSYLPP*ASSPSSESSSSTSSTSAARGESSCSSPSETESSSSSS 248
           S SSS  +S P            +SS SS SSS++SS+S++   SS SS S +  SSSSS
Sbjct:  82 SPSSSSSTSSPSSSSS-------SSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSS 134

Query: 247 SEPCETASSDSDCSDSACSDSGSESEEKQEESDPLSLSPCSS 122
           S    ++SS S  S S+ S S S S      S P S SP SS
Sbjct: 135 SPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 176

>sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo
        sapiens GN=TNRC18 PE=1 SV=3

          Length = 2968

 Score =  60 bits (143), Expect = 1e-008
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = -1

Query:  358 ASSPSSESSSSTSSTSAARGESSCSSPSETESSSSSSSEPCETASSDSDCSDSACSDSGS 179
            A+SP+S SSSS+SS+S++   SS SS S + SSSSSSS    ++SS S  S S+ S S S
Sbjct: 2609 AASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2668

Query:  178 ESEEKQEES 152
             S    E+S
Sbjct: 2669 SSSTTDEDS 2677

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,036,011,446
Number of Sequences: 518415
Number of Extensions: 212036011446
Number of Successful Extensions: 1301713192
Number of sequences better than 0.0: 0