BLASTX 7.6.2
Query= UN60756 /QuerySize=713
(712 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 122 3e-028
TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 122 3e-028
TAIR9_protein||AT1G09140.1 | Symbols: | SF2/ASF-like splicing m... 96 1e-020
TAIR9_protein||AT1G09140.2 | Symbols: | SF2/ASF-like splicing m... 96 1e-020
TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 94 1e-019
TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 94 1e-019
TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 94 1e-019
TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing facto... 94 1e-019
TAIR9_protein||AT4G02430.1 | Symbols: | pre-mRNA splicing facto... 94 1e-019
TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich sp... 49 3e-006
TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RN... 47 8e-006
>TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334829 FORWARD
Length = 301
Score = 122 bits (304), Expect = 3e-028
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MSGRFSRSIYVGNLPGD RE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH+RDAE
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAE 59
>TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334617 FORWARD
Length = 298
Score = 122 bits (304), Expect = 3e-028
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MSGRFSRSIYVGNLPGD RE EIED+FYKYGRIVDIELKVPPRPPCYCFVEFEH+RDAE
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAE 59
>TAIR9_protein||AT1G09140.1 | Symbols: | SF2/ASF-like splicing modulator
(SRP30) | chr1:2942887-2945818 REVERSE
Length = 269
Score = 96 bits (238), Expect = 1e-020
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R++R+IYVGNLPGD R+ E+EDLFYKYG IVDI+LK+PPRPP Y FVEFE RDA+
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAD 59
>TAIR9_protein||AT1G09140.2 | Symbols: | SF2/ASF-like splicing modulator
(SRP30) | chr1:2943528-2945818 REVERSE
Length = 257
Score = 96 bits (238), Expect = 1e-020
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R++R+IYVGNLPGD R+ E+EDLFYKYG IVDI+LK+PPRPP Y FVEFE RDA+
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAD 59
>TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 94 bits (231), Expect = 1e-019
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R SR++YVGNLPGD RE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ ARDAE
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAE 59
>TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-628995 FORWARD
Length = 286
Score = 94 bits (231), Expect = 1e-019
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R SR++YVGNLPGD RE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ ARDAE
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAE 59
>TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 94 bits (231), Expect = 1e-019
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R SR++YVGNLPGD RE E+EDLF KYG +V I+LKVPPRPP Y FVEF+ ARDAE
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAE 59
>TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing factor, putative /
SR1 protein, putative | chr4:1069186-1071313 FORWARD
Length = 279
Score = 94 bits (231), Expect = 1e-019
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R SR+IYVGNLPGD RE E+EDLF KYG +V I+LK+PPRPP Y FVEFE ARDA+
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDAD 59
>TAIR9_protein||AT4G02430.1 | Symbols: | pre-mRNA splicing factor, putative /
SR1 protein, putative | chr4:1069186-1070543 FORWARD
Length = 179
Score = 94 bits (231), Expect = 1e-019
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +1
Query: 505 MSGRFSRSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
MS R SR+IYVGNLPGD RE E+EDLF KYG +V I+LK+PPRPP Y FVEFE ARDA+
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDAD 59
>TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19138492 REVERSE
Length = 251
Score = 49 bits (115), Expect = 3e-006
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +1
Query: 523 RSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
R +YVGN DTR S++E LF K+GR+ +++K Y FV FE RDAE
Sbjct: 2 RHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMK-----SGYAFVYFEDERDAE 49
>TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RNA binding /
nucleic acid binding / nucleotide binding | chr3:22900311-22902159
REVERSE
Length = 265
Score = 47 bits (111), Expect = 8e-006
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Frame = +1
Query: 523 RSIYVGNLPGDTRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAE 681
R ++VGN +TR+S++E LF KYGR+ +++K Y FV FE RDAE
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMK-----SGYAFVYFEDERDAE 49
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,668,142,742
Number of Sequences: 33410
Number of Extensions: 27668142742
Number of Successful Extensions: 910575460
Number of sequences better than 0.0: 0
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