Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN61467


BLASTX 7.6.2

Query= UN61467 /QuerySize=642
        (641 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297827625|ref|XP_002881695.1| hypothetical protein ARALYDRAFT...    123   2e-026
gi|297789204|ref|XP_002862592.1| predicted protein [Arabidopsis ...     95   6e-018
gi|42571141|ref|NP_973644.1| uncharacterized protein [Arabidopsi...     91   8e-017

>gi|297827625|ref|XP_002881695.1| hypothetical protein ARALYDRAFT_483047
        [Arabidopsis lyrata subsp. lyrata]

          Length = 93

 Score =  123 bits (308), Expect = 2e-026
 Identities = 68/98 (69%), Positives = 75/98 (76%), Gaps = 13/98 (13%)
 Frame = +2

Query: 161 MEDIDAVQKPVVVDPPLHNEAPPP--------VVAGVAQPAEFHLIQRIQRALVELRELR 316
           ME+ DAV KPVVVDPPL++EAPP         + A  A P E HLIQRIQRALVELRELR
Sbjct:   1 MEESDAVPKPVVVDPPLYDEAPPSASRRRPVMIAADAAPPEENHLIQRIQRALVELRELR 60

Query: 317 NQFNAILREMELEVRGGGGGEEEEEAESSVEDPEDDDS 430
           NQFNAILRE+E+EV     GEEEE+AESSVEDPED DS
Sbjct:  61 NQFNAILRELEVEV-----GEEEEQAESSVEDPEDSDS 93

>gi|297789204|ref|XP_002862592.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 85

 Score =  95 bits (235), Expect = 6e-018
 Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 8/73 (10%)
 Frame = +2

Query: 161 MEDIDAVQKPVVVDPPLHNEAPPP--------VVAGVAQPAEFHLIQRIQRALVELRELR 316
           ME+ DAV KPVVVDPPL++EAPP         + A  A P E HLIQRIQRALVELRELR
Sbjct:   1 MEESDAVPKPVVVDPPLYDEAPPSASRRRPVMIAADAAPPEENHLIQRIQRALVELRELR 60

Query: 317 NQFNAILREMELE 355
           NQFNAILRE+ELE
Sbjct:  61 NQFNAILRELELE 73

>gi|42571141|ref|NP_973644.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 93

 Score =  91 bits (225), Expect = 8e-017
 Identities = 50/72 (69%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
 Frame = +2

Query: 203 PPLHNEAPPPVVAGVAQPAEFHLIQRIQRALVELRELRNQFNAILREMELEVRGGGGGEE 382
           P      P  + A  A PAE HLIQRIQRALVELRELRNQFNAILRE+E EV     GEE
Sbjct:  23 PSASQRRPVVIAADAAPPAENHLIQRIQRALVELRELRNQFNAILRELEFEV-----GEE 77

Query: 383 EEEAESSVEDPE 418
           EE+AESSVEDPE
Sbjct:  78 EEQAESSVEDPE 89

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,290,166,940
Number of Sequences: 15229318
Number of Extensions: 6207290166940
Number of Successful Extensions: 1469931442
Number of sequences better than 0.0: 0